RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 EAF2Q96CJ1 260 aaPredicted RBP18.57■□□□□ 0.56
TNFSF13-202ENST00000349228 LETM1O95202 739 aaPredicted RBP18.56■□□□□ 0.56
TNFSF13-202ENST00000349228 FGD1P98174 961 aa18.56■□□□□ 0.56
TNFSF13-202ENST00000349228 TTC5Q8N0Z6 440 aa18.56■□□□□ 0.56
TNFSF13-202ENST00000349228 XAGE3Q8WTP9 111 aa18.56■□□□□ 0.56
TNFSF13-202ENST00000349228 MAP4K1Q92918 833 aa18.56■□□□□ 0.56
TNFSF13-202ENST00000349228 MRC1P22897 1456 aa18.56■□□□□ 0.56
TNFSF13-202ENST00000349228 STX6O43752 255 aa18.56■□□□□ 0.56
TNFSF13-202ENST00000349228 PTH1RQ03431 593 aa18.56■□□□□ 0.56
TNFSF13-202ENST00000349228 RNF20Q5VTR2 975 aa18.56■□□□□ 0.56
TNFSF13-202ENST00000349228 ANKRD13DQ6ZTN6 518 aa18.56■□□□□ 0.56
TNFSF13-202ENST00000349228 NFATC2IPQ8NCF5 419 aa18.56■□□□□ 0.56
TNFSF13-202ENST00000349228 FMNL2Q96PY5 1086 aa18.56■□□□□ 0.56
TNFSF13-202ENST00000349228 ALDH8A1Q9H2A2 487 aaPredicted RBP18.56■□□□□ 0.56
TNFSF13-202ENST00000349228 COPRSQ9NQ92 184 aa18.56■□□□□ 0.56
TNFSF13-202ENST00000349228 RPAP1Q9BWH6 1393 aaPredicted RBP18.55■□□□□ 0.56
TNFSF13-202ENST00000349228 SCN11AQ9UI33 1791 aa18.55■□□□□ 0.56
TNFSF13-202ENST00000349228 PRPF40BQ6NWY9 871 aaKnown RBP18.55■□□□□ 0.56
TNFSF13-202ENST00000349228 COPS6Q7L5N1 327 aa18.55■□□□□ 0.56
TNFSF13-202ENST00000349228 JAKMIP1Q96N16 626 aaKnown RBP18.55■□□□□ 0.56
TNFSF13-202ENST00000349228 SYCE3A1L190 88 aa18.54■□□□□ 0.56
TNFSF13-202ENST00000349228 SLC39A6Q13433 755 aa18.54■□□□□ 0.56
TNFSF13-202ENST00000349228 ANKRD1Q15327 319 aa18.54■□□□□ 0.56
TNFSF13-202ENST00000349228 USP48Q86UV5 1035 aa18.54■□□□□ 0.56
TNFSF13-202ENST00000349228 ERBB4Q15303 1308 aa18.54■□□□□ 0.56
TNFSF13-202ENST00000349228 TSPY26PQ9H489 355 aa18.54■□□□□ 0.56
TNFSF13-202ENST00000349228 RBM8AQ9Y5S9 174 aaKnown RBP18.54■□□□□ 0.56
TNFSF13-202ENST00000349228 CSB-PGBD3P0DP91 1061 aa18.53■□□□□ 0.56
TNFSF13-202ENST00000349228 SYT1P21579 422 aa18.53■□□□□ 0.56
TNFSF13-202ENST00000349228 CREB3L3Q68CJ9 461 aa18.53■□□□□ 0.56
TNFSF13-202ENST00000349228 TICAM2Q86XR7 235 aa18.53■□□□□ 0.56
TNFSF13-202ENST00000349228 ZNF496Q96IT1 587 aaPredicted RBP18.53■□□□□ 0.56
TNFSF13-202ENST00000349228 MYD88Q99836 296 aa18.53■□□□□ 0.56
TNFSF13-202ENST00000349228 HMG20BQ9P0W2 317 aa18.53■□□□□ 0.56
TNFSF13-202ENST00000349228 NSFL1CQ9UNZ2 370 aaKnown RBP18.53■□□□□ 0.56
TNFSF13-202ENST00000349228 RFX7Q2KHR2 1363 aa18.53■□□□□ 0.56
TNFSF13-202ENST00000349228 MYL6BP14649 208 aa18.52■□□□□ 0.56
TNFSF13-202ENST00000349228 KCNJ4P48050 445 aa18.52■□□□□ 0.56
TNFSF13-202ENST00000349228 LRP10Q7Z4F1 713 aa18.52■□□□□ 0.56
TNFSF13-202ENST00000349228 FAM184AQ8NB25 1140 aa18.52■□□□□ 0.56
TNFSF13-202ENST00000349228 CCDC8Q9H0W5 538 aaPredicted RBP18.52■□□□□ 0.56
TNFSF13-202ENST00000349228 F13A1P00488 732 aa18.52■□□□□ 0.55
TNFSF13-202ENST00000349228 NMIQ13287 307 aaPredicted RBP18.52■□□□□ 0.55
TNFSF13-202ENST00000349228 TSGA10IPQ3SY00 556 aa18.52■□□□□ 0.55
TNFSF13-202ENST00000349228 RABL6Q3YEC7 729 aaPredicted RBP18.52■□□□□ 0.55
TNFSF13-202ENST00000349228 CADPS2Q86UW7 1296 aa18.52■□□□□ 0.55
TNFSF13-202ENST00000349228 ATP5JP18859 108 aa18.51■□□□□ 0.55
TNFSF13-202ENST00000349228 MSNP26038 577 aaKnown RBP18.51■□□□□ 0.55
TNFSF13-202ENST00000349228 MCM5P33992 734 aa18.51■□□□□ 0.55
TNFSF13-202ENST00000349228 UBE2HP62256 183 aa18.51■□□□□ 0.55
TNFSF13-202ENST00000349228 CHAMP1Q96JM3 812 aa18.51■□□□□ 0.55
TNFSF13-202ENST00000349228 FSD1Q9BTV5 496 aa18.51■□□□□ 0.55
TNFSF13-202ENST00000349228 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.51■□□□□ 0.55
TNFSF13-202ENST00000349228 MEGF6O75095 1541 aa18.51■□□□□ 0.55
TNFSF13-202ENST00000349228 CPDO75976 1380 aa18.51■□□□□ 0.55
TNFSF13-202ENST00000349228 COL18A1P39060 1754 aa18.51■□□□□ 0.55
TNFSF13-202ENST00000349228 RGPD5Q99666 1765 aa18.51■□□□□ 0.55
TNFSF13-202ENST00000349228 UVSSAQ2YD98 709 aa18.5■□□□□ 0.55
TNFSF13-202ENST00000349228 TNS3Q68CZ2 1445 aa18.5■□□□□ 0.55
TNFSF13-202ENST00000349228 CCDC183Q5T5S1 534 aa18.5■□□□□ 0.55
TNFSF13-202ENST00000349228 JCADQ9P266 1359 aa18.5■□□□□ 0.55
TNFSF13-202ENST00000349228 SLC27A2O14975 620 aa18.49■□□□□ 0.55
TNFSF13-202ENST00000349228 PDCP20941 246 aa18.49■□□□□ 0.55
TNFSF13-202ENST00000349228 CABP4P57796 275 aa18.49■□□□□ 0.55
TNFSF13-202ENST00000349228 KRT32Q14532 448 aa18.49■□□□□ 0.55
TNFSF13-202ENST00000349228 ADCK5Q3MIX3 580 aa18.49■□□□□ 0.55
TNFSF13-202ENST00000349228 PLBD2Q8NHP8 589 aa18.49■□□□□ 0.55
TNFSF13-202ENST00000349228 NOL7Q9UMY1 257 aaKnown RBP18.49■□□□□ 0.55
TNFSF13-202ENST00000349228 TMEM94Q12767 1356 aa18.49■□□□□ 0.55
TNFSF13-202ENST00000349228 MED23Q9ULK4 1368 aa18.49■□□□□ 0.55
TNFSF13-202ENST00000349228 GJB2P29033 226 aa18.49■□□□□ 0.55
TNFSF13-202ENST00000349228 RFX5P48382 616 aaPredicted RBP18.49■□□□□ 0.55
TNFSF13-202ENST00000349228 FAM227BQ96M60 508 aa18.49■□□□□ 0.55
TNFSF13-202ENST00000349228 BOLA2Q9H3K6 86 aa18.49■□□□□ 0.55
TNFSF13-202ENST00000349228 USP16Q9Y5T5 823 aa18.49■□□□□ 0.55
TNFSF13-202ENST00000349228 C5P01031 1676 aa18.49■□□□□ 0.55
TNFSF13-202ENST00000349228 CYP27B1O15528 508 aa18.48■□□□□ 0.55
TNFSF13-202ENST00000349228 CCDC83Q8IWF9 413 aa18.48■□□□□ 0.55
TNFSF13-202ENST00000349228 NAP1L5Q96NT1 182 aaPredicted RBP18.48■□□□□ 0.55
TNFSF13-202ENST00000349228 BCL11BQ9C0K0 894 aaPredicted RBP18.48■□□□□ 0.55
TNFSF13-202ENST00000349228 SIL1Q9H173 461 aa18.48■□□□□ 0.55
TNFSF13-202ENST00000349228 PTPN12Q05209 780 aaKnown RBP18.47■□□□□ 0.55
TNFSF13-202ENST00000349228 EPHA10Q5JZY3 1008 aa18.47■□□□□ 0.55
TNFSF13-202ENST00000349228 BLOC1S2Q6QNY1 142 aa18.47■□□□□ 0.55
TNFSF13-202ENST00000349228 CCDC39Q9UFE4 941 aa18.47■□□□□ 0.55
TNFSF13-202ENST00000349228 GADD45BO75293 160 aaPredicted RBP18.47■□□□□ 0.55
TNFSF13-202ENST00000349228 TNNI3KQ59H18 835 aa18.47■□□□□ 0.55
TNFSF13-202ENST00000349228 USPL1Q5W0Q7 1092 aa18.47■□□□□ 0.55
TNFSF13-202ENST00000349228 TLR7Q9NYK1 1049 aaKnown RBP18.47■□□□□ 0.55
TNFSF13-202ENST00000349228 MTMR6Q9Y217 621 aa18.47■□□□□ 0.55
TNFSF13-202ENST00000349228 FPGT-TNNI3KV9GXZ4 949 aa18.47■□□□□ 0.55
TNFSF13-202ENST00000349228 PKD1L3Q7Z443 1732 aa18.46■□□□□ 0.55
TNFSF13-202ENST00000349228 SPATA31A3Q5VYP0 1347 aa18.46■□□□□ 0.55
TNFSF13-202ENST00000349228 A0A0D9SFI3 127 aa18.45■□□□□ 0.54
TNFSF13-202ENST00000349228 LARGE1O95461 756 aa18.45■□□□□ 0.54
TNFSF13-202ENST00000349228 CPA1P15085 419 aa18.45■□□□□ 0.54
TNFSF13-202ENST00000349228 ME3Q16798 604 aa18.45■□□□□ 0.54
TNFSF13-202ENST00000349228 CNPY2Q9Y2B0 182 aa18.45■□□□□ 0.54
TNFSF13-202ENST00000349228 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.45■□□□□ 0.54
TNFSF13-202ENST00000349228 RPS6KB1P23443 525 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms