RNA–Protein interactions for RNA: ENST00000345317.6

SKAP2-201, Transcript of src kinase associated phosphoprotein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP2, Length 3,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-201ENST00000345317 CHAF1AQ13111 956 aaPredicted RBP10.36□□□□□ -0.75
SKAP2-201ENST00000345317 RALYLQ86SE5 291 aaKnown RBP10.36□□□□□ -0.75
SKAP2-201ENST00000345317 FERMT3Q86UX7 667 aa10.36□□□□□ -0.75
SKAP2-201ENST00000345317 CCDC83Q8IWF9 413 aa10.36□□□□□ -0.75
SKAP2-201ENST00000345317 IRS4O14654 1257 aaPredicted RBP10.36□□□□□ -0.75
SKAP2-201ENST00000345317 BLOC1S2Q6QNY1 142 aa10.36□□□□□ -0.75
SKAP2-201ENST00000345317 RAB11FIP4Q86YS3 637 aa10.36□□□□□ -0.75
SKAP2-201ENST00000345317 SSH3Q8TE77 659 aa10.36□□□□□ -0.75
SKAP2-201ENST00000345317 ZBTB1Q9Y2K1 713 aa10.36□□□□□ -0.75
SKAP2-201ENST00000345317 TNS3Q68CZ2 1445 aa10.36□□□□□ -0.75
SKAP2-201ENST00000345317 IGHMBP2P38935 993 aaKnown RBP10.36□□□□□ -0.75
SKAP2-201ENST00000345317 CEBPZQ03701 1054 aaKnown RBP10.36□□□□□ -0.75
SKAP2-201ENST00000345317 TRDNQ13061 729 aa10.36□□□□□ -0.75
SKAP2-201ENST00000345317 EAF2Q96CJ1 260 aaPredicted RBP10.36□□□□□ -0.75
SKAP2-201ENST00000345317 DDX11Q96FC9 970 aa10.36□□□□□ -0.75
SKAP2-201ENST00000345317 PDRG1Q9NUG6 133 aa10.36□□□□□ -0.75
SKAP2-201ENST00000345317 TLR7Q9NYK1 1049 aaKnown RBP10.36□□□□□ -0.75
SKAP2-201ENST00000345317 NUCB2P80303 420 aa10.35□□□□□ -0.75
SKAP2-201ENST00000345317 LRRFIP1Q32MZ4 808 aaKnown RBP10.35□□□□□ -0.75
SKAP2-201ENST00000345317 NFXL1Q6ZNB6 911 aa10.35□□□□□ -0.75
SKAP2-201ENST00000345317 SYNE4Q8N205 404 aa10.35□□□□□ -0.75
SKAP2-201ENST00000345317 EVI5LQ96CN4 794 aa10.35□□□□□ -0.75
SKAP2-201ENST00000345317 FAM227BQ96M60 508 aa10.35□□□□□ -0.75
SKAP2-201ENST00000345317 ERVV-2B6SEH9 535 aa10.35□□□□□ -0.75
SKAP2-201ENST00000345317 CPLX1O14810 134 aa10.35□□□□□ -0.75
SKAP2-201ENST00000345317 FIBPO43427 364 aa10.35□□□□□ -0.75
SKAP2-201ENST00000345317 ZRSR1Q15695 479 aaKnown RBP10.35□□□□□ -0.75
SKAP2-201ENST00000345317 SLC4A8Q2Y0W8 1093 aa10.35□□□□□ -0.75
SKAP2-201ENST00000345317 CCDC129Q6ZRS4 1044 aa10.35□□□□□ -0.75
SKAP2-201ENST00000345317 USP26Q9BXU7 913 aa10.35□□□□□ -0.75
SKAP2-201ENST00000345317 TMX4Q9H1E5 349 aaPredicted RBP10.35□□□□□ -0.75
SKAP2-201ENST00000345317 WWC3Q9ULE0 1092 aa10.35□□□□□ -0.75
SKAP2-201ENST00000345317 JAG2Q9Y219 1238 aa10.35□□□□□ -0.75
SKAP2-201ENST00000345317 HIP1O00291 1037 aa10.35□□□□□ -0.75
SKAP2-201ENST00000345317 MCM4P33991 863 aa10.35□□□□□ -0.75
SKAP2-201ENST00000345317 NMIQ13287 307 aaPredicted RBP10.35□□□□□ -0.75
SKAP2-201ENST00000345317 EPHA10Q5JZY3 1008 aa10.35□□□□□ -0.75
SKAP2-201ENST00000345317 GDPD2Q9HCC8 539 aa10.35□□□□□ -0.75
SKAP2-201ENST00000345317 IGKV5-2P06315 115 aa10.34□□□□□ -0.75
SKAP2-201ENST00000345317 CAVIN1Q6NZI2 390 aaKnown RBP10.34□□□□□ -0.75
SKAP2-201ENST00000345317 ZGPATQ8N5A5 531 aaKnown RBP10.34□□□□□ -0.75
SKAP2-201ENST00000345317 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.34□□□□□ -0.752e-6■■■■□ 24.3
SKAP2-201ENST00000345317 LRP2BPQ9P2M1 347 aa10.34□□□□□ -0.75
SKAP2-201ENST00000345317 ZNF219Q9P2Y4 722 aaPredicted RBP10.34□□□□□ -0.75
SKAP2-201ENST00000345317 USP21Q9UK80 565 aa10.34□□□□□ -0.75
SKAP2-201ENST00000345317 ITSN1Q15811 1721 aa10.34□□□□□ -0.75
SKAP2-201ENST00000345317 RAD21O60216 631 aa10.34□□□□□ -0.75
SKAP2-201ENST00000345317 NECAB1Q8N987 351 aa10.34□□□□□ -0.75
SKAP2-201ENST00000345317 PSMA5P28066 241 aa10.33□□□□□ -0.76
SKAP2-201ENST00000345317 RBM10P98175 930 aaKnown RBP10.33□□□□□ -0.76
SKAP2-201ENST00000345317 LRRC24Q50LG9 513 aa10.33□□□□□ -0.76
SKAP2-201ENST00000345317 TNPO1Q92973 898 aaKnown RBP10.33□□□□□ -0.76
SKAP2-201ENST00000345317 RAI14Q9P0K7 980 aa10.33□□□□□ -0.76
SKAP2-201ENST00000345317 TAF5LO75529 589 aa10.33□□□□□ -0.76
SKAP2-201ENST00000345317 CHST3Q7LGC8 479 aa10.33□□□□□ -0.76
SKAP2-201ENST00000345317 PUS3Q9BZE2 481 aaKnown RBP10.33□□□□□ -0.76
SKAP2-201ENST00000345317 PPP1R1BQ9UD71 204 aaPredicted RBP10.33□□□□□ -0.76
SKAP2-201ENST00000345317 GNPATO15228 680 aa10.33□□□□□ -0.76
SKAP2-201ENST00000345317 RRAGDQ9NQL2 400 aaPredicted RBP10.33□□□□□ -0.76
SKAP2-201ENST00000345317 ZNF652Q9Y2D9 606 aa10.33□□□□□ -0.76
SKAP2-201ENST00000345317 TULP1O00294 542 aaPredicted RBP10.33□□□□□ -0.76
SKAP2-201ENST00000345317 KCNQ2O43526 872 aa10.33□□□□□ -0.76
SKAP2-201ENST00000345317 ATP2B3Q16720 1220 aa10.33□□□□□ -0.76
SKAP2-201ENST00000345317 RNF214Q8ND24 703 aa10.33□□□□□ -0.76
SKAP2-201ENST00000345317 RBM8AQ9Y5S9 174 aaKnown RBP10.33□□□□□ -0.76
SKAP2-201ENST00000345317 A0A1B0GUL7 405 aa10.32□□□□□ -0.76
SKAP2-201ENST00000345317 CD2BP2O95400 341 aaKnown RBP10.32□□□□□ -0.76
SKAP2-201ENST00000345317 AKAP2Q9Y2D5 859 aa10.32□□□□□ -0.76
SKAP2-201ENST00000345317 ITGA6P23229 1130 aa10.32□□□□□ -0.76
SKAP2-201ENST00000345317 RFC4P35249 363 aa10.32□□□□□ -0.76
SKAP2-201ENST00000345317 NBPF5PQ86XG9 351 aaPredicted RBP10.32□□□□□ -0.76
SKAP2-201ENST00000345317 TMX3Q96JJ7 454 aa10.32□□□□□ -0.76
SKAP2-201ENST00000345317 AK7Q96M32 723 aa10.32□□□□□ -0.76
SKAP2-201ENST00000345317 PALD1Q9ULE6 856 aa10.32□□□□□ -0.76
SKAP2-201ENST00000345317 KIF20BQ96Q89 1820 aa10.32□□□□□ -0.76
SKAP2-201ENST00000345317 NBPF26B4DH59 902 aa10.32□□□□□ -0.76
SKAP2-201ENST00000345317 PDE4CQ08493 712 aa10.32□□□□□ -0.76
SKAP2-201ENST00000345317 SF3A1Q15459 793 aaKnown RBP10.32□□□□□ -0.76
SKAP2-201ENST00000345317 TNNI3KQ59H18 835 aa10.32□□□□□ -0.76
SKAP2-201ENST00000345317 NBPF14Q5TI25 921 aa10.32□□□□□ -0.76
SKAP2-201ENST00000345317 NBPF10Q6P3W6 841 aaKnown RBP10.32□□□□□ -0.76
SKAP2-201ENST00000345317 NBPF15Q8N660 670 aa10.32□□□□□ -0.76
SKAP2-201ENST00000345317 FPGT-TNNI3KV9GXZ4 949 aa10.32□□□□□ -0.76
SKAP2-201ENST00000345317 ATP2B1P20020 1258 aa10.31□□□□□ -0.76
SKAP2-201ENST00000345317 IL15P40933 162 aaPredicted RBP10.31□□□□□ -0.76
SKAP2-201ENST00000345317 CCDC82Q8N4S0 544 aa10.31□□□□□ -0.76
SKAP2-201ENST00000345317 SEC62Q99442 399 aaKnown RBP10.31□□□□□ -0.76
SKAP2-201ENST00000345317 NRXN3Q9Y4C0 1643 aa10.31□□□□□ -0.76
SKAP2-201ENST00000345317 CCT2P78371 535 aaKnown RBP10.31□□□□□ -0.76
SKAP2-201ENST00000345317 TCIRG1Q13488 830 aa10.31□□□□□ -0.76
SKAP2-201ENST00000345317 CCDC191Q8NCU4 936 aa10.31□□□□□ -0.76
SKAP2-201ENST00000345317 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.31□□□□□ -0.76
SKAP2-201ENST00000345317 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.31□□□□□ -0.76
SKAP2-201ENST00000345317 MST1RQ04912 1400 aa10.31□□□□□ -0.76
SKAP2-201ENST00000345317 HLFQ16534 295 aa10.31□□□□□ -0.76
SKAP2-201ENST00000345317 AIDAQ96BJ3 306 aa10.31□□□□□ -0.76
SKAP2-201ENST00000345317 IBTKQ9P2D0 1353 aaPredicted RBP10.31□□□□□ -0.76
SKAP2-201ENST00000345317 ANKIB1Q9P2G1 1089 aa10.31□□□□□ -0.76
SKAP2-201ENST00000345317 NRKQ7Z2Y5 1582 aa10.3□□□□□ -0.76
SKAP2-201ENST00000345317 SSH2Q76I76 1423 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms