RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 STK31Q9BXU1 1019 aa18.26■□□□□ 0.51
LIMK2-203ENST00000340552 HNRNPH2P55795 449 aaKnown RBP18.26■□□□□ 0.51
LIMK2-203ENST00000340552 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.26■□□□□ 0.51
LIMK2-203ENST00000340552 PALD1Q9ULE6 856 aa18.26■□□□□ 0.51
LIMK2-203ENST00000340552 V9GYY5 206 aaPredicted RBP18.26■□□□□ 0.51
LIMK2-203ENST00000340552 UBE2HP62256 183 aa18.25■□□□□ 0.51
LIMK2-203ENST00000340552 TEFQ10587 303 aa18.25■□□□□ 0.51
LIMK2-203ENST00000340552 CCDC30Q5VVM6 783 aa18.25■□□□□ 0.51
LIMK2-203ENST00000340552 G2E3Q7L622 706 aa18.25■□□□□ 0.51
LIMK2-203ENST00000340552 CCDC186Q7Z3E2 898 aa18.25■□□□□ 0.51
LIMK2-203ENST00000340552 RGS22Q8NE09 1264 aa18.25■□□□□ 0.51
LIMK2-203ENST00000340552 SOS1Q07889 1333 aaPredicted RBP18.25■□□□□ 0.51
LIMK2-203ENST00000340552 TSPYL1Q9H0U9 437 aa18.25■□□□□ 0.51
LIMK2-203ENST00000340552 CYP2C19P33261 490 aa18.25■□□□□ 0.51
LIMK2-203ENST00000340552 FBXO38Q6PIJ6 1188 aa18.25■□□□□ 0.51
LIMK2-203ENST00000340552 ZBTB9Q96C00 473 aa18.25■□□□□ 0.51
LIMK2-203ENST00000340552 CSB-PGBD3P0DP91 1061 aa18.24■□□□□ 0.51
LIMK2-203ENST00000340552 NECTIN2Q92692 538 aa18.24■□□□□ 0.51
LIMK2-203ENST00000340552 RNMTO43148 476 aaKnown RBP18.24■□□□□ 0.51
LIMK2-203ENST00000340552 RAPGEF4Q8WZA2 1011 aa18.24■□□□□ 0.51
LIMK2-203ENST00000340552 NRBP1Q9UHY1 535 aa18.24■□□□□ 0.51
LIMK2-203ENST00000340552 CACNA1FO60840 1977 aa18.24■□□□□ 0.51
LIMK2-203ENST00000340552 SOS2Q07890 1332 aaPredicted RBP18.23■□□□□ 0.51
LIMK2-203ENST00000340552 APBB1O00213 710 aa18.23■□□□□ 0.51
LIMK2-203ENST00000340552 ZNF215Q9UL58 517 aaPredicted RBP18.23■□□□□ 0.51
LIMK2-203ENST00000340552 FAM208AQ9UK61 1670 aaKnown RBP18.23■□□□□ 0.51
LIMK2-203ENST00000340552 FAM193AP78312 1265 aa18.23■□□□□ 0.51
LIMK2-203ENST00000340552 CPDO75976 1380 aa18.23■□□□□ 0.51
LIMK2-203ENST00000340552 RAD51AP2Q09MP3 1159 aa18.22■□□□□ 0.51
LIMK2-203ENST00000340552 TEX2Q8IWB9 1127 aa18.22■□□□□ 0.51
LIMK2-203ENST00000340552 KIF1BPQ96EK5 621 aa18.22■□□□□ 0.51
LIMK2-203ENST00000340552 KDM3BQ7LBC6 1761 aa18.22■□□□□ 0.51
LIMK2-203ENST00000340552 ZNF592Q92610 1267 aa18.22■□□□□ 0.51
LIMK2-203ENST00000340552 BTBD11A6QL63 1104 aa18.21■□□□□ 0.51
LIMK2-203ENST00000340552 EIF4A1P60842 406 aaKnown RBP18.21■□□□□ 0.51
LIMK2-203ENST00000340552 CREBRFQ8IUR6 639 aa18.21■□□□□ 0.51
LIMK2-203ENST00000340552 ZNF446Q9NWS9 450 aa18.21■□□□□ 0.51
LIMK2-203ENST00000340552 ABCC6O95255 1503 aa18.21■□□□□ 0.51
LIMK2-203ENST00000340552 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.21■□□□□ 0.51
LIMK2-203ENST00000340552 FIBPO43427 364 aa18.21■□□□□ 0.51
LIMK2-203ENST00000340552 TPD52L1Q16890 204 aaPredicted RBP18.21■□□□□ 0.51
LIMK2-203ENST00000340552 ZSCAN25Q6NSZ9 544 aa18.21■□□□□ 0.51
LIMK2-203ENST00000340552 NOL10Q9BSC4 688 aaKnown RBP18.21■□□□□ 0.51
LIMK2-203ENST00000340552 F6X3S4 739 aa18.2■□□□□ 0.5
LIMK2-203ENST00000340552 FLIIQ13045 1269 aa18.2■□□□□ 0.5
LIMK2-203ENST00000340552 ELF2Q15723 593 aa18.2■□□□□ 0.5
LIMK2-203ENST00000340552 KCNQ3O43525 872 aa18.2■□□□□ 0.5
LIMK2-203ENST00000340552 CHRM1P11229 460 aaPredicted RBP18.2■□□□□ 0.5
LIMK2-203ENST00000340552 TATP17735 454 aaPredicted RBP18.2■□□□□ 0.5
LIMK2-203ENST00000340552 HDGFL1Q5TGJ6 251 aa18.2■□□□□ 0.5
LIMK2-203ENST00000340552 CEP135Q66GS9 1140 aa18.2■□□□□ 0.5
LIMK2-203ENST00000340552 SLC4A10Q6U841 1118 aa18.2■□□□□ 0.5
LIMK2-203ENST00000340552 UPF3BQ9BZI7 483 aaKnown RBP18.2■□□□□ 0.5
LIMK2-203ENST00000340552 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.2■□□□□ 0.5
LIMK2-203ENST00000340552 OVOS2A0A0G2JMS6 1433 aa18.2■□□□□ 0.5
LIMK2-203ENST00000340552 ATP10DQ9P241 1426 aa18.2■□□□□ 0.5
LIMK2-203ENST00000340552 LUZP1Q86V48 1076 aa18.18■□□□□ 0.5
LIMK2-203ENST00000340552 ANKRD44Q8N8A2 993 aa18.18■□□□□ 0.5
LIMK2-203ENST00000340552 CCDC192P0DO97 292 aa18.18■□□□□ 0.5
LIMK2-203ENST00000340552 ZSCAN22P10073 491 aaPredicted RBP18.18■□□□□ 0.5
LIMK2-203ENST00000340552 DRC7Q8IY82 874 aa18.18■□□□□ 0.5
LIMK2-203ENST00000340552 PRDM11Q9NQV5 511 aa18.18■□□□□ 0.5
LIMK2-203ENST00000340552 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.18■□□□□ 0.5
LIMK2-203ENST00000340552 MEGF6O75095 1541 aa18.17■□□□□ 0.5
LIMK2-203ENST00000340552 EIF2S2P20042 333 aaKnown RBP18.17■□□□□ 0.5
LIMK2-203ENST00000340552 CCT4P50991 539 aaKnown RBP18.17■□□□□ 0.5
LIMK2-203ENST00000340552 FAM200AQ8TCP9 573 aa18.17■□□□□ 0.5
LIMK2-203ENST00000340552 MEIS3Q99687 375 aa18.17■□□□□ 0.5
LIMK2-203ENST00000340552 HOXB7P09629 217 aa18.17■□□□□ 0.5
LIMK2-203ENST00000340552 CACTINQ8WUQ7 758 aaKnown RBP18.17■□□□□ 0.5
LIMK2-203ENST00000340552 SPG7Q9UQ90 795 aa18.17■□□□□ 0.5
LIMK2-203ENST00000340552 SLFNL1Q499Z3 407 aa18.16■□□□□ 0.5
LIMK2-203ENST00000340552 GTF3C6Q969F1 213 aa18.16■□□□□ 0.5
LIMK2-203ENST00000340552 TUBGCP6Q96RT7 1819 aa18.16■□□□□ 0.5
LIMK2-203ENST00000340552 SECISBP2LQ93073 1101 aaKnown RBP18.16■□□□□ 0.5
LIMK2-203ENST00000340552 ESYT1Q9BSJ8 1104 aa18.16■□□□□ 0.5
LIMK2-203ENST00000340552 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.16■□□□□ 0.52e-6■■■■□ 24.3
LIMK2-203ENST00000340552 USP27XA6NNY8 438 aa18.15■□□□□ 0.5
LIMK2-203ENST00000340552 KLHL34Q8N239 644 aa18.15■□□□□ 0.5
LIMK2-203ENST00000340552 ADAMTS7Q9UKP4 1686 aa18.15■□□□□ 0.5
LIMK2-203ENST00000340552 NFATC2IPQ8NCF5 419 aa18.15■□□□□ 0.5
LIMK2-203ENST00000340552 SIPA1L3O60292 1781 aaPredicted RBP18.15■□□□□ 0.5
LIMK2-203ENST00000340552 MCCP23508 829 aa18.14■□□□□ 0.5
LIMK2-203ENST00000340552 ANAPC15P60006 121 aa18.14■□□□□ 0.5
LIMK2-203ENST00000340552 ERO1AQ96HE7 468 aa18.14■□□□□ 0.5
LIMK2-203ENST00000340552 MRVI1Q9Y6F6 885 aa18.14■□□□□ 0.5
LIMK2-203ENST00000340552 PHKG2P15735 406 aa18.14■□□□□ 0.49
LIMK2-203ENST00000340552 CEP85Q6P2H3 762 aa18.14■□□□□ 0.49
LIMK2-203ENST00000340552 EFCC1Q9HA90 598 aa18.14■□□□□ 0.49
LIMK2-203ENST00000340552 RSPH14Q9UHP6 348 aa18.14■□□□□ 0.49
LIMK2-203ENST00000340552 ZNF75DP51815 510 aa18.13■□□□□ 0.49
LIMK2-203ENST00000340552 PLA2G4DQ86XP0 818 aa18.13■□□□□ 0.49
LIMK2-203ENST00000340552 RPAP2Q8IXW5 612 aaPredicted RBP18.13■□□□□ 0.49
LIMK2-203ENST00000340552 PHAXQ9H814 394 aaKnown RBP18.13■□□□□ 0.49
LIMK2-203ENST00000340552 NHSL1Q5SYE7 1610 aa18.13■□□□□ 0.49
LIMK2-203ENST00000340552 STX6O43752 255 aa18.13■□□□□ 0.49
LIMK2-203ENST00000340552 F13A1P00488 732 aa18.13■□□□□ 0.49
LIMK2-203ENST00000340552 CCDC144BQ3MJ40 725 aa18.13■□□□□ 0.49
LIMK2-203ENST00000340552 CCDC144CPQ8IYA2 1237 aa18.13■□□□□ 0.49
LIMK2-203ENST00000340552 IFNL2Q8IZJ0 200 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms