RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 RFX5P48382 616 aaPredicted RBP26.2■■□□□ 1.78
VRK2-201ENST00000340157 OSBPL3Q9H4L5 887 aa26.2■■□□□ 1.78
VRK2-201ENST00000340157 BCORQ6W2J9 1755 aa26.2■■□□□ 1.78
VRK2-201ENST00000340157 PDE1AP54750 535 aa26.19■■□□□ 1.78
VRK2-201ENST00000340157 KIF1BPQ96EK5 621 aa26.19■■□□□ 1.78
VRK2-201ENST00000340157 HSP90AB4PQ58FF6 505 aa26.19■■□□□ 1.78
VRK2-201ENST00000340157 KLHDC4Q8TBB5 520 aa26.19■■□□□ 1.78
VRK2-201ENST00000340157 NPM2Q86SE8 214 aaKnown RBP26.18■■□□□ 1.78
VRK2-201ENST00000340157 NLRP10Q86W26 655 aa26.17■■□□□ 1.78
VRK2-201ENST00000340157 GPTP24298 496 aa26.17■■□□□ 1.78
VRK2-201ENST00000340157 TSHZ3Q63HK5 1081 aa26.17■■□□□ 1.78
VRK2-201ENST00000340157 HSP90AB3PQ58FF7 597 aa26.16■■□□□ 1.78
VRK2-201ENST00000340157 LMBR1LQ6UX01 489 aa26.16■■□□□ 1.78
VRK2-201ENST00000340157 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.16■■□□□ 1.78
VRK2-201ENST00000340157 CNTNAP4Q9C0A0 1308 aa26.15■■□□□ 1.78
VRK2-201ENST00000340157 CAMTA2O94983 1202 aa26.15■■□□□ 1.78
VRK2-201ENST00000340157 PCCAP05165 728 aaPredicted RBP26.15■■□□□ 1.78
VRK2-201ENST00000340157 MX1P20591 662 aa26.15■■□□□ 1.78
VRK2-201ENST00000340157 UBN2Q6ZU65 1347 aa26.15■■□□□ 1.78
VRK2-201ENST00000340157 SASH1O94885 1247 aa26.15■■□□□ 1.78
VRK2-201ENST00000340157 PTPN12Q05209 780 aaKnown RBP26.15■■□□□ 1.78
VRK2-201ENST00000340157 COPRSQ9NQ92 184 aa26.15■■□□□ 1.78
VRK2-201ENST00000340157 STAP2Q9UGK3 403 aa26.15■■□□□ 1.78
VRK2-201ENST00000340157 OS9Q13438 667 aaPredicted RBP26.14■■□□□ 1.78
VRK2-201ENST00000340157 NUTM1Q86Y26 1132 aa26.14■■□□□ 1.78
VRK2-201ENST00000340157 ZNF34Q8IZ26 560 aa26.14■■□□□ 1.78
VRK2-201ENST00000340157 MYH3P11055 1940 aa26.14■■□□□ 1.77
VRK2-201ENST00000340157 ZBTB38Q8NAP3 1195 aaPredicted RBP26.13■■□□□ 1.77
VRK2-201ENST00000340157 FAM89AQ96GI7 184 aa26.13■■□□□ 1.77
VRK2-201ENST00000340157 SIL1Q9H173 461 aa26.13■■□□□ 1.77
VRK2-201ENST00000340157 KRT27Q7Z3Y8 459 aa26.13■■□□□ 1.77
VRK2-201ENST00000340157 SYNE4Q8N205 404 aa26.13■■□□□ 1.77
VRK2-201ENST00000340157 ZNF772Q68DY9 489 aaPredicted RBP26.12■■□□□ 1.77
VRK2-201ENST00000340157 ERC1Q8IUD2 1116 aa26.12■■□□□ 1.77
VRK2-201ENST00000340157 BCL11BQ9C0K0 894 aaPredicted RBP26.12■■□□□ 1.77
VRK2-201ENST00000340157 SDSP20132 328 aa26.11■■□□□ 1.77
VRK2-201ENST00000340157 ANP32AP39687 249 aaKnown RBP26.11■■□□□ 1.77
VRK2-201ENST00000340157 CCNL1Q9UK58 526 aaPredicted RBP26.11■■□□□ 1.77
VRK2-201ENST00000340157 SCN7AQ01118 1682 aa26.11■■□□□ 1.77
VRK2-201ENST00000340157 G3BP1Q13283 466 aaKnown RBP eCLIP26.11■■□□□ 1.77
VRK2-201ENST00000340157 TBC1D9Q6ZT07 1266 aa26.11■■□□□ 1.77
VRK2-201ENST00000340157 RBM6P78332 1123 aaKnown RBP26.1■■□□□ 1.77
VRK2-201ENST00000340157 PLA2G12BQ9BX93 195 aa26.1■■□□□ 1.77
VRK2-201ENST00000340157 CDHR2Q9BYE9 1310 aa26.1■■□□□ 1.77
VRK2-201ENST00000340157 C4BP0C0L5 1744 aa26.09■■□□□ 1.77
VRK2-201ENST00000340157 RC3H1Q5TC82 1133 aaKnown RBP26.08■■□□□ 1.77
VRK2-201ENST00000340157 SMIM5Q71RC9 77 aa26.08■■□□□ 1.77
VRK2-201ENST00000340157 AOX1Q06278 1338 aa26.08■■□□□ 1.77
VRK2-201ENST00000340157 FAM196AQ6ZSG2 479 aa26.08■■□□□ 1.77
VRK2-201ENST00000340157 CDC45O75419 566 aa26.07■■□□□ 1.76
VRK2-201ENST00000340157 CHMP3Q9Y3E7 222 aa26.07■■□□□ 1.76
VRK2-201ENST00000340157 USP42Q9H9J4 1324 aaKnown RBP26.07■■□□□ 1.76
VRK2-201ENST00000340157 CLASRPQ8N2M8 674 aaKnown RBP26.06■■□□□ 1.76
VRK2-201ENST00000340157 PI4K2BQ8TCG2 481 aa26.06■■□□□ 1.76
VRK2-201ENST00000340157 AK9Q5TCS8 1911 aa26.06■■□□□ 1.76
VRK2-201ENST00000340157 AMIGO3Q86WK7 504 aa26.06■■□□□ 1.76
VRK2-201ENST00000340157 MFAP1P55081 439 aaKnown RBP26.05■■□□□ 1.76
VRK2-201ENST00000340157 SUSD4Q5VX71 490 aa26.05■■□□□ 1.76
VRK2-201ENST00000340157 EAF2Q96CJ1 260 aaPredicted RBP26.05■■□□□ 1.76
VRK2-201ENST00000340157 TRMT112Q9UI30 125 aaKnown RBP26.05■■□□□ 1.76
VRK2-201ENST00000340157 DDX60Q8IY21 1712 aaKnown RBP26.05■■□□□ 1.76
VRK2-201ENST00000340157 C4AP0C0L4 1744 aa26.05■■□□□ 1.76
VRK2-201ENST00000340157 CSF1RP07333 972 aa26.04■■□□□ 1.76
VRK2-201ENST00000340157 LRRC4BQ9NT99 713 aa26.04■■□□□ 1.76
VRK2-201ENST00000340157 RPS6KA4O75676 772 aa26.04■■□□□ 1.76
VRK2-201ENST00000340157 TBC1D32Q96NH3 1257 aa26.04■■□□□ 1.76
VRK2-201ENST00000340157 LAMB2P55268 1798 aa26.03■■□□□ 1.76
VRK2-201ENST00000340157 AACSQ86V21 672 aa26.03■■□□□ 1.76
VRK2-201ENST00000340157 TRIM37O94972 964 aa26.02■■□□□ 1.76
VRK2-201ENST00000340157 ATG9AQ7Z3C6 839 aa26.02■■□□□ 1.76
VRK2-201ENST00000340157 ZNF594Q96JF6 807 aaPredicted RBP26.02■■□□□ 1.76
VRK2-201ENST00000340157 IRS4O14654 1257 aaPredicted RBP26.02■■□□□ 1.76
VRK2-201ENST00000340157 GNPATO15228 680 aa26.02■■□□□ 1.76
VRK2-201ENST00000340157 MSH5O43196 834 aa26.02■■□□□ 1.76
VRK2-201ENST00000340157 IPO9Q96P70 1041 aaKnown RBP26.01■■□□□ 1.75
VRK2-201ENST00000340157 BCL2L12Q9HB09 334 aa26.01■■□□□ 1.75
VRK2-201ENST00000340157 TLR7Q9NYK1 1049 aaKnown RBP26.01■■□□□ 1.75
VRK2-201ENST00000340157 TTC41PQ6P2S7 1318 aa26■■□□□ 1.75
VRK2-201ENST00000340157 TFCP2Q12800 502 aa26■■□□□ 1.75
VRK2-201ENST00000340157 TTLL11Q8NHH1 800 aa26■■□□□ 1.75
VRK2-201ENST00000340157 CCDC85AQ96PX6 553 aaPredicted RBP26■■□□□ 1.75
VRK2-201ENST00000340157 NIP7Q9Y221 180 aaKnown RBP eCLIP26■■□□□ 1.75
VRK2-201ENST00000340157 UBR3Q6ZT12 1888 aa26■■□□□ 1.75
VRK2-201ENST00000340157 IFIT2P09913 472 aaKnown RBP26■■□□□ 1.75
VRK2-201ENST00000340157 CTSWP56202 376 aa26■■□□□ 1.75
VRK2-201ENST00000340157 PARP10Q53GL7 1025 aa26■■□□□ 1.75
VRK2-201ENST00000340157 CLEC4GQ6UXB4 293 aa26■■□□□ 1.75
VRK2-201ENST00000340157 UPF2Q9HAU5 1272 aaKnown RBP26■■□□□ 1.75
VRK2-201ENST00000340157 RGS17Q9UGC6 210 aaPredicted RBP26■■□□□ 1.75
VRK2-201ENST00000340157 NTSR2O95665 410 aa25.99■■□□□ 1.75
VRK2-201ENST00000340157 LRRC24Q50LG9 513 aa25.99■■□□□ 1.75
VRK2-201ENST00000340157 CCDC8Q9H0W5 538 aaPredicted RBP25.99■■□□□ 1.75
VRK2-201ENST00000340157 CASZ1Q86V15 1759 aa25.99■■□□□ 1.75
VRK2-201ENST00000340157 ZNF652Q9Y2D9 606 aa25.98■■□□□ 1.75
VRK2-201ENST00000340157 SH3TC1Q8TE82 1336 aa25.98■■□□□ 1.75
VRK2-201ENST00000340157 UTP14AQ9BVJ6 771 aaKnown RBP25.98■■□□□ 1.75
VRK2-201ENST00000340157 PUS3Q9BZE2 481 aaKnown RBP25.98■■□□□ 1.75
VRK2-201ENST00000340157 ECHDC1Q9NTX5 307 aa25.98■■□□□ 1.75
VRK2-201ENST00000340157 NARFQ9UHQ1 456 aa25.98■■□□□ 1.75
VRK2-201ENST00000340157 COL24A1Q17RW2 1714 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms