RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 SETDB2Q96T68 719 aa22.56■■□□□ 1.2
SDCBP2-201ENST00000339987 TM4SF1P30408 202 aa22.55■■□□□ 1.2
SDCBP2-201ENST00000339987 NFIXQ14938 502 aa22.55■■□□□ 1.2
SDCBP2-201ENST00000339987 CHMP4BQ9H444 224 aaKnown RBP22.55■■□□□ 1.2
SDCBP2-201ENST00000339987 UTYO14607 1347 aa22.54■■□□□ 1.2
SDCBP2-201ENST00000339987 IRX6P78412 446 aaPredicted RBP22.54■■□□□ 1.2
SDCBP2-201ENST00000339987 PDGFDQ9GZP0 370 aaPredicted RBP22.54■■□□□ 1.2
SDCBP2-201ENST00000339987 USP44Q9H0E7 712 aa22.54■■□□□ 1.2
SDCBP2-201ENST00000339987 CARMIL3Q8ND23 1372 aa22.53■■□□□ 1.2
SDCBP2-201ENST00000339987 GRM8O00222 908 aa22.53■■□□□ 1.2
SDCBP2-201ENST00000339987 ZBTB7BO15156 539 aaPredicted RBP22.53■■□□□ 1.2
SDCBP2-201ENST00000339987 BICDL1Q6ZP65 573 aa22.53■■□□□ 1.2
SDCBP2-201ENST00000339987 PPP1R42Q7Z4L9 355 aa22.53■■□□□ 1.2
SDCBP2-201ENST00000339987 PCCAP05165 728 aaPredicted RBP22.52■■□□□ 1.2
SDCBP2-201ENST00000339987 GNAI3P08754 354 aa22.52■■□□□ 1.2
SDCBP2-201ENST00000339987 SUSD4Q5VX71 490 aa22.52■■□□□ 1.2
SDCBP2-201ENST00000339987 C9orf78Q9NZ63 289 aaPredicted RBP22.52■■□□□ 1.2
SDCBP2-201ENST00000339987 H7C1W4 665 aa22.51■■□□□ 1.19
SDCBP2-201ENST00000339987 ZBTB38Q8NAP3 1195 aaPredicted RBP22.51■■□□□ 1.19
SDCBP2-201ENST00000339987 MEIS3Q99687 375 aa22.51■■□□□ 1.19
SDCBP2-201ENST00000339987 UTP14AQ9BVJ6 771 aaKnown RBP22.51■■□□□ 1.19
SDCBP2-201ENST00000339987 NTSR2O95665 410 aa22.5■■□□□ 1.19
SDCBP2-201ENST00000339987 AAMPQ13685 434 aa22.5■■□□□ 1.19
SDCBP2-201ENST00000339987 EXOC6Q8TAG9 804 aa22.5■■□□□ 1.19
SDCBP2-201ENST00000339987 NYXQ9GZU5 481 aa22.5■■□□□ 1.19
SDCBP2-201ENST00000339987 CASP7P55210 303 aa22.49■■□□□ 1.19
SDCBP2-201ENST00000339987 DDR1Q08345 913 aa22.49■■□□□ 1.19
SDCBP2-201ENST00000339987 MSL1Q68DK7 614 aa22.49■■□□□ 1.19
SDCBP2-201ENST00000339987 ZBTB40Q9NUA8 1239 aa22.49■■□□□ 1.19
SDCBP2-201ENST00000339987 TRMT112Q9UI30 125 aaKnown RBP22.49■■□□□ 1.19
SDCBP2-201ENST00000339987 CDHR2Q9BYE9 1310 aa22.49■■□□□ 1.19
SDCBP2-201ENST00000339987 PSDA5PKW4 1024 aaPredicted RBP22.48■■□□□ 1.19
SDCBP2-201ENST00000339987 POLRMTO00411 1230 aaKnown RBP22.48■■□□□ 1.19
SDCBP2-201ENST00000339987 NBPF7P0C2Y1 421 aaPredicted RBP22.48■■□□□ 1.19
SDCBP2-201ENST00000339987 UBTFL1P0CB47 393 aaPredicted RBP22.48■■□□□ 1.19
SDCBP2-201ENST00000339987 NBPF5PQ86XG9 351 aaPredicted RBP22.48■■□□□ 1.19
SDCBP2-201ENST00000339987 HDAC5Q9UQL6 1122 aa22.48■■□□□ 1.19
SDCBP2-201ENST00000339987 SH3TC1Q8TE82 1336 aa22.48■■□□□ 1.19
SDCBP2-201ENST00000339987 MMP10P09238 476 aa22.48■■□□□ 1.19
SDCBP2-201ENST00000339987 TPTE2Q6XPS3 522 aa22.48■■□□□ 1.19
SDCBP2-201ENST00000339987 UBE3BQ7Z3V4 1068 aa22.48■■□□□ 1.19
SDCBP2-201ENST00000339987 MTFR1LQ9H019 292 aa22.48■■□□□ 1.19
SDCBP2-201ENST00000339987 NRXN2Q9P2S2 1712 aa22.47■■□□□ 1.19
SDCBP2-201ENST00000339987 SERPINB2P05120 415 aa22.47■■□□□ 1.19
SDCBP2-201ENST00000339987 FAM89AQ96GI7 184 aa22.47■■□□□ 1.19
SDCBP2-201ENST00000339987 FAM177BA6PVY3 158 aa22.46■■□□□ 1.19
SDCBP2-201ENST00000339987 PARP3Q9Y6F1 533 aa22.46■■□□□ 1.19
SDCBP2-201ENST00000339987 GNAI2P04899 355 aa22.45■■□□□ 1.18
SDCBP2-201ENST00000339987 LAMB2P55268 1798 aa22.44■■□□□ 1.18
SDCBP2-201ENST00000339987 HSP90B1P14625 803 aaKnown RBP22.44■■□□□ 1.18
SDCBP2-201ENST00000339987 SLC10A5Q5PT55 438 aa22.44■■□□□ 1.18
SDCBP2-201ENST00000339987 ERICH6BQ5W0A0 696 aa22.44■■□□□ 1.18
SDCBP2-201ENST00000339987 CNBD1Q8NA66 436 aa22.44■■□□□ 1.18
SDCBP2-201ENST00000339987 JARID2Q92833 1246 aaPredicted RBP22.44■■□□□ 1.18
SDCBP2-201ENST00000339987 PLA2G12BQ9BX93 195 aa22.44■■□□□ 1.18
SDCBP2-201ENST00000339987 RIC1Q4ADV7 1423 aa22.43■■□□□ 1.18
SDCBP2-201ENST00000339987 IRS4O14654 1257 aaPredicted RBP22.43■■□□□ 1.18
SDCBP2-201ENST00000339987 ZBTB7AO95365 584 aa22.43■■□□□ 1.18
SDCBP2-201ENST00000339987 RTL5Q5HYW3 569 aaPredicted RBP22.43■■□□□ 1.18
SDCBP2-201ENST00000339987 PRR5LQ6MZQ0 368 aa22.43■■□□□ 1.18
SDCBP2-201ENST00000339987 NUTM1Q86Y26 1132 aa22.43■■□□□ 1.18
SDCBP2-201ENST00000339987 SYNE4Q8N205 404 aa22.43■■□□□ 1.18
SDCBP2-201ENST00000339987 SUCLG2Q96I99 432 aa22.43■■□□□ 1.18
SDCBP2-201ENST00000339987 GTF2E1P29083 439 aaPredicted RBP22.42■■□□□ 1.18
SDCBP2-201ENST00000339987 ERFEQ4G0M1 354 aa22.42■■□□□ 1.18
SDCBP2-201ENST00000339987 KAZALD1Q96I82 304 aa22.42■■□□□ 1.18
SDCBP2-201ENST00000339987 LRRFIP2Q9Y608 721 aaKnown RBP22.42■■□□□ 1.18
SDCBP2-201ENST00000339987 DDX60Q8IY21 1712 aaKnown RBP22.42■■□□□ 1.18
SDCBP2-201ENST00000339987 ABCC12Q96J65 1359 aa22.42■■□□□ 1.18
SDCBP2-201ENST00000339987 NPHP1O15259 732 aa22.4■■□□□ 1.18
SDCBP2-201ENST00000339987 PDE8AO60658 829 aa22.4■■□□□ 1.18
SDCBP2-201ENST00000339987 ST5P78524 1137 aa22.4■■□□□ 1.18
SDCBP2-201ENST00000339987 RABL6Q3YEC7 729 aaPredicted RBP22.4■■□□□ 1.18
SDCBP2-201ENST00000339987 C1orf115Q9H7X2 142 aa22.4■■□□□ 1.18
SDCBP2-201ENST00000339987 HCLS1P14317 486 aaPredicted RBP22.39■■□□□ 1.17
SDCBP2-201ENST00000339987 POLD1P28340 1107 aa22.39■■□□□ 1.17
SDCBP2-201ENST00000339987 FOXO4P98177 505 aa22.39■■□□□ 1.17
SDCBP2-201ENST00000339987 EPHA10Q5JZY3 1008 aa22.39■■□□□ 1.17
SDCBP2-201ENST00000339987 BICC1Q9H694 974 aaKnown RBP22.39■■□□□ 1.17
SDCBP2-201ENST00000339987 ATF5Q9Y2D1 282 aaPredicted RBP22.39■■□□□ 1.17
SDCBP2-201ENST00000339987 MTX1Q13505 466 aa22.38■■□□□ 1.17
SDCBP2-201ENST00000339987 ANKRD44Q8N8A2 993 aa22.38■■□□□ 1.17
SDCBP2-201ENST00000339987 SGIP1Q9BQI5 828 aa22.38■■□□□ 1.17
SDCBP2-201ENST00000339987 MYH3P11055 1940 aa22.38■■□□□ 1.17
SDCBP2-201ENST00000339987 CTSWP56202 376 aa22.37■■□□□ 1.17
SDCBP2-201ENST00000339987 RPAP2Q8IXW5 612 aaPredicted RBP22.37■■□□□ 1.17
SDCBP2-201ENST00000339987 CSF1RP07333 972 aa22.36■■□□□ 1.17
SDCBP2-201ENST00000339987 CEP85Q6P2H3 762 aa22.36■■□□□ 1.17
SDCBP2-201ENST00000339987 PCDHB15Q9Y5E8 787 aa22.36■■□□□ 1.17
SDCBP2-201ENST00000339987 TNRC6CQ9HCJ0 1690 aaKnown RBP22.35■■□□□ 1.17
SDCBP2-201ENST00000339987 PTGER2P43116 358 aa22.35■■□□□ 1.17
SDCBP2-201ENST00000339987 CCDC24Q8N4L8 307 aa22.35■■□□□ 1.17
SDCBP2-201ENST00000339987 NLRP3Q96P20 1036 aa22.35■■□□□ 1.17
SDCBP2-201ENST00000339987 BRIP1Q9BX63 1249 aa22.35■■□□□ 1.17
SDCBP2-201ENST00000339987 C10orf71Q711Q0 1435 aa22.34■■□□□ 1.17
SDCBP2-201ENST00000339987 ATP8B2P98198 1209 aa22.34■■□□□ 1.17
SDCBP2-201ENST00000339987 SF3B3Q15393 1217 aaKnown RBP22.34■■□□□ 1.17
SDCBP2-201ENST00000339987 LMBR1LQ6UX01 489 aa22.34■■□□□ 1.17
SDCBP2-201ENST00000339987 TTLL11Q8NHH1 800 aa22.34■■□□□ 1.17
SDCBP2-201ENST00000339987 SPON1Q9HCB6 807 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms