RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 CNNM3Q8NE01 707 aa11.26□□□□□ -0.61
PTCHD4-201ENST00000339488 CTCFLQ8NI51 663 aaPredicted RBP11.26□□□□□ -0.61
PTCHD4-201ENST00000339488 ARFGAP3Q9NP61 516 aa11.26□□□□□ -0.61
PTCHD4-201ENST00000339488 A0A087WUV0 522 aaPredicted RBP11.26□□□□□ -0.61
PTCHD4-201ENST00000339488 TTC36A6NLP5 189 aa11.26□□□□□ -0.61
PTCHD4-201ENST00000339488 GNAI3P08754 354 aa11.26□□□□□ -0.61
PTCHD4-201ENST00000339488 KCNB2Q92953 911 aa11.26□□□□□ -0.61
PTCHD4-201ENST00000339488 ITFG2Q969R8 447 aa11.26□□□□□ -0.61
PTCHD4-201ENST00000339488 RUNDC1Q96C34 613 aa11.26□□□□□ -0.61
PTCHD4-201ENST00000339488 MYO1FO00160 1098 aa11.26□□□□□ -0.61
PTCHD4-201ENST00000339488 ZSCAN22P10073 491 aaPredicted RBP11.26□□□□□ -0.61
PTCHD4-201ENST00000339488 TRDNQ13061 729 aa11.26□□□□□ -0.61
PTCHD4-201ENST00000339488 LONRF2Q1L5Z9 754 aa11.26□□□□□ -0.61
PTCHD4-201ENST00000339488 FERMT3Q86UX7 667 aa11.26□□□□□ -0.61
PTCHD4-201ENST00000339488 PARD3BQ8TEW8 1205 aa11.26□□□□□ -0.61
PTCHD4-201ENST00000339488 PARD6BQ9BYG5 372 aa11.26□□□□□ -0.61
PTCHD4-201ENST00000339488 G3BP2Q9UN86 482 aaKnown RBP11.26□□□□□ -0.61
PTCHD4-201ENST00000339488 KANK1Q14678 1352 aa11.26□□□□□ -0.61
PTCHD4-201ENST00000339488 DIP2BQ9P265 1576 aa11.25□□□□□ -0.61
PTCHD4-201ENST00000339488 CCDC141Q6ZP82 1450 aa11.25□□□□□ -0.61
PTCHD4-201ENST00000339488 EXOC5O00471 708 aa11.25□□□□□ -0.61
PTCHD4-201ENST00000339488 GNAI1P63096 354 aa11.25□□□□□ -0.61
PTCHD4-201ENST00000339488 TNMDQ9H2S6 317 aa11.25□□□□□ -0.61
PTCHD4-201ENST00000339488 DACT1Q9NYF0 836 aa11.25□□□□□ -0.61
PTCHD4-201ENST00000339488 PREX2Q70Z35 1606 aa11.25□□□□□ -0.61
PTCHD4-201ENST00000339488 SYT1P21579 422 aa11.25□□□□□ -0.61
PTCHD4-201ENST00000339488 GCC1Q96CN9 775 aa11.25□□□□□ -0.61
PTCHD4-201ENST00000339488 ABCA9Q8IUA7 1624 aa11.25□□□□□ -0.61
PTCHD4-201ENST00000339488 ROCK1Q13464 1354 aa11.24□□□□□ -0.61
PTCHD4-201ENST00000339488 CALRP27797 417 aaKnown RBP11.24□□□□□ -0.61
PTCHD4-201ENST00000339488 ACTN3Q08043 901 aaPredicted RBP11.24□□□□□ -0.61
PTCHD4-201ENST00000339488 ZKSCAN8Q15776 578 aaPredicted RBP11.24□□□□□ -0.61
PTCHD4-201ENST00000339488 OTUD6BQ8N6M0 293 aa11.24□□□□□ -0.61
PTCHD4-201ENST00000339488 CCDC102AQ96A19 550 aa11.24□□□□□ -0.61
PTCHD4-201ENST00000339488 VEZTQ9HBM0 779 aa11.24□□□□□ -0.61
PTCHD4-201ENST00000339488 CFDP1Q9UEE9 299 aaPredicted RBP11.24□□□□□ -0.61
PTCHD4-201ENST00000339488 ASXL1Q8IXJ9 1541 aa11.24□□□□□ -0.61
PTCHD4-201ENST00000339488 ELP1O95163 1332 aa11.24□□□□□ -0.61
PTCHD4-201ENST00000339488 MYO5CQ9NQX4 1742 aa11.24□□□□□ -0.61
PTCHD4-201ENST00000339488 VPS37CA5D8V6 355 aaPredicted RBP11.24□□□□□ -0.61
PTCHD4-201ENST00000339488 KIF3CO14782 793 aa11.24□□□□□ -0.61
PTCHD4-201ENST00000339488 F13A1P00488 732 aa11.24□□□□□ -0.61
PTCHD4-201ENST00000339488 DNAJC14Q6Y2X3 702 aaPredicted RBP11.24□□□□□ -0.61
PTCHD4-201ENST00000339488 C11orf57Q6ZUT1 292 aaPredicted RBP11.24□□□□□ -0.61
PTCHD4-201ENST00000339488 PRDM16Q9HAZ2 1276 aa11.24□□□□□ -0.61
PTCHD4-201ENST00000339488 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.24□□□□□ -0.61
PTCHD4-201ENST00000339488 ARHGAP5Q13017 1502 aa11.23□□□□□ -0.61
PTCHD4-201ENST00000339488 ARHGEF12Q9NZN5 1544 aa11.23□□□□□ -0.61
PTCHD4-201ENST00000339488 STX6O43752 255 aa11.23□□□□□ -0.61
PTCHD4-201ENST00000339488 APOBRQ0VD83 1088 aa11.23□□□□□ -0.61
PTCHD4-201ENST00000339488 PTPN21Q16825 1174 aa11.23□□□□□ -0.61
PTCHD4-201ENST00000339488 CCDC158Q5M9N0 1113 aa11.23□□□□□ -0.61
PTCHD4-201ENST00000339488 AP1ARQ63HQ0 302 aa11.23□□□□□ -0.61
PTCHD4-201ENST00000339488 WDR63Q8IWG1 891 aa11.23□□□□□ -0.61
PTCHD4-201ENST00000339488 ZBTB10Q96DT7 871 aa11.23□□□□□ -0.61
PTCHD4-201ENST00000339488 ETAA1Q9NY74 926 aa11.23□□□□□ -0.61
PTCHD4-201ENST00000339488 ERC2O15083 957 aa11.23□□□□□ -0.61
PTCHD4-201ENST00000339488 CCT5P48643 541 aa11.23□□□□□ -0.61
PTCHD4-201ENST00000339488 FAM69CQ0P6D2 419 aa11.23□□□□□ -0.61
PTCHD4-201ENST00000339488 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.23□□□□□ -0.61
PTCHD4-201ENST00000339488 TDRD7Q8NHU6 1098 aaKnown RBP11.23□□□□□ -0.61
PTCHD4-201ENST00000339488 TRIM6Q9C030 488 aaPredicted RBP11.23□□□□□ -0.61
PTCHD4-201ENST00000339488 EHD4Q9H223 541 aa11.23□□□□□ -0.61
PTCHD4-201ENST00000339488 KIF9Q9HAQ2 790 aa11.23□□□□□ -0.61
PTCHD4-201ENST00000339488 TRPM1Q7Z4N2 1603 aa11.23□□□□□ -0.61
PTCHD4-201ENST00000339488 GPTP24298 496 aa11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 NF2P35240 595 aa11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 TEX11Q8IYF3 940 aa11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 ZNF483Q8TF39 744 aaPredicted RBP11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 ERCC4Q92889 916 aaPredicted RBP11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 TATDN2Q93075 761 aa11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 PRAM1Q96QH2 718 aa11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 ANO2Q9NQ90 1003 aa11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 CPSF2Q9P2I0 782 aaKnown RBP11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 MCM8Q9UJA3 840 aa11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 SAMD9LQ8IVG5 1584 aa11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 KIF13AQ9H1H9 1805 aa11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 MYBL2P10244 700 aa11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 NEDD9Q14511 834 aa11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 CASC1Q6TDU7 716 aa11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 TTC6Q86TZ1 520 aa11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 FAM204AQ9H8W3 233 aa11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 TSPOAP1O95153 1857 aa11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 SRGAP3O43295 1099 aa11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 C21orf2O43822 256 aa11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 GOLGA8FQ08AF8 430 aa11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 GOLGA8DPQ0D2H9 430 aa11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 ZKSCAN4Q969J2 545 aaPredicted RBP11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 CAPN7Q9Y6W3 813 aa11.22□□□□□ -0.61
PTCHD4-201ENST00000339488 GOLGA6L19H0YKK7 550 aa11.21□□□□□ -0.61
PTCHD4-201ENST00000339488 ZBTB7BO15156 539 aaPredicted RBP11.21□□□□□ -0.61
PTCHD4-201ENST00000339488 ECEL1O95672 775 aa11.21□□□□□ -0.61
PTCHD4-201ENST00000339488 CPA1P15085 419 aa11.21□□□□□ -0.61
PTCHD4-201ENST00000339488 GCKP35557 465 aa11.21□□□□□ -0.61
PTCHD4-201ENST00000339488 JAKMIP3Q5VZ66 844 aa11.21□□□□□ -0.61
PTCHD4-201ENST00000339488 CENPHQ9H3R5 247 aa11.21□□□□□ -0.61
PTCHD4-201ENST00000339488 MKRN1Q9UHC7 482 aaKnown RBP11.21□□□□□ -0.61
PTCHD4-201ENST00000339488 ODF2LQ9ULJ1 636 aa11.21□□□□□ -0.61
PTCHD4-201ENST00000339488 ENO4A6NNW6 628 aa11.21□□□□□ -0.62
PTCHD4-201ENST00000339488 ELL2O00472 640 aaPredicted RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms