RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 CDK13Q14004 1512 aaKnown RBP19.17■□□□□ 0.66
SATB1-201ENST00000338745 PRG4Q92954 1404 aaPredicted RBP19.17■□□□□ 0.66
SATB1-201ENST00000338745 USP48Q86UV5 1035 aa19.17■□□□□ 0.66
SATB1-201ENST00000338745 NECAB1Q8N987 351 aa19.17■□□□□ 0.66
SATB1-201ENST00000338745 EXOC1Q9NV70 894 aa19.17■□□□□ 0.66
SATB1-201ENST00000338745 AFMP43652 599 aa19.16■□□□□ 0.66
SATB1-201ENST00000338745 TTC22Q5TAA0 569 aa19.16■□□□□ 0.66
SATB1-201ENST00000338745 COMMD10Q9Y6G5 202 aa19.16■□□□□ 0.66
SATB1-201ENST00000338745 ANKRD18BA2A2Z9 1011 aa19.16■□□□□ 0.66
SATB1-201ENST00000338745 MCM6Q14566 821 aa19.16■□□□□ 0.66
SATB1-201ENST00000338745 CC2D2AQ9P2K1 1620 aa19.16■□□□□ 0.66
SATB1-201ENST00000338745 MICU3Q86XE3 530 aa19.16■□□□□ 0.66
SATB1-201ENST00000338745 TMOD3Q9NYL9 352 aa19.16■□□□□ 0.66
SATB1-201ENST00000338745 PTPRCP08575 1304 aa19.15■□□□□ 0.66
SATB1-201ENST00000338745 NOLC1Q14978 699 aaKnown RBP eCLIP19.15■□□□□ 0.66
SATB1-201ENST00000338745 TBC1D32Q96NH3 1257 aa19.15■□□□□ 0.66
SATB1-201ENST00000338745 NEK1Q96PY6 1258 aa19.15■□□□□ 0.66
SATB1-201ENST00000338745 TMOD2Q9NZR1 351 aa19.15■□□□□ 0.66
SATB1-201ENST00000338745 ZNF652Q9Y2D9 606 aa19.15■□□□□ 0.66
SATB1-201ENST00000338745 ZSCAN22P10073 491 aaPredicted RBP19.15■□□□□ 0.66
SATB1-201ENST00000338745 TCP11L1Q9NUJ3 509 aa19.15■□□□□ 0.66
SATB1-201ENST00000338745 MPRIPQ6WCQ1 1025 aa19.15■□□□□ 0.66
SATB1-201ENST00000338745 ZPR1O75312 459 aa19.15■□□□□ 0.66
SATB1-201ENST00000338745 C6orf163Q5TEZ5 329 aa19.15■□□□□ 0.66
SATB1-201ENST00000338745 PPP1R14CQ8TAE6 165 aa19.15■□□□□ 0.66
SATB1-201ENST00000338745 MSL1Q68DK7 614 aa19.14■□□□□ 0.66
SATB1-201ENST00000338745 SPATA24Q86W54 205 aa19.14■□□□□ 0.66
SATB1-201ENST00000338745 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.14■□□□□ 0.66
SATB1-201ENST00000338745 V9GYY5 206 aaPredicted RBP19.14■□□□□ 0.66
SATB1-201ENST00000338745 HSPA4P34932 840 aa19.14■□□□□ 0.65
SATB1-201ENST00000338745 CKAP4Q07065 602 aaKnown RBP19.14■□□□□ 0.65
SATB1-201ENST00000338745 KANK3Q6NY19 840 aa19.14■□□□□ 0.65
SATB1-201ENST00000338745 WAPLQ7Z5K2 1190 aa19.14■□□□□ 0.65
SATB1-201ENST00000338745 TRIM47Q96LD4 638 aa19.14■□□□□ 0.65
SATB1-201ENST00000338745 SYKP43405 635 aa19.14■□□□□ 0.65
SATB1-201ENST00000338745 CCDC155Q8N6L0 562 aa19.14■□□□□ 0.65
SATB1-201ENST00000338745 TMEM110-MUSTN1A8MSY1 372 aa19.14■□□□□ 0.65
SATB1-201ENST00000338745 AEBP2Q6ZN18 517 aaPredicted RBP19.14■□□□□ 0.65
SATB1-201ENST00000338745 EHMT1Q9H9B1 1298 aa19.14■□□□□ 0.65
SATB1-201ENST00000338745 PTGS1P23219 599 aa19.13■□□□□ 0.65
SATB1-201ENST00000338745 RNF41Q9H4P4 317 aaPredicted RBP19.13■□□□□ 0.65
SATB1-201ENST00000338745 IARSP41252 1262 aaKnown RBP19.13■□□□□ 0.65
SATB1-201ENST00000338745 MXRA7P84157 204 aa19.13■□□□□ 0.65
SATB1-201ENST00000338745 DNAI1Q9UI46 699 aa19.13■□□□□ 0.65
SATB1-201ENST00000338745 SF3B2Q13435 895 aaKnown RBP19.13■□□□□ 0.65
SATB1-201ENST00000338745 KLHL40Q2TBA0 621 aa19.13■□□□□ 0.65
SATB1-201ENST00000338745 KIF14Q15058 1648 aa19.13■□□□□ 0.65
SATB1-201ENST00000338745 KIF4AO95239 1232 aa19.13■□□□□ 0.65
SATB1-201ENST00000338745 IDEP14735 1019 aa19.13■□□□□ 0.65
SATB1-201ENST00000338745 PRDM11Q9NQV5 511 aa19.13■□□□□ 0.65
SATB1-201ENST00000338745 AOPEPQ8N6M6 819 aa19.12■□□□□ 0.65
SATB1-201ENST00000338745 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.12■□□□□ 0.65
SATB1-201ENST00000338745 FERP16591 822 aa19.12■□□□□ 0.65
SATB1-201ENST00000338745 RRAGBQ5VZM2 374 aa19.12■□□□□ 0.65
SATB1-201ENST00000338745 IKBKGQ9Y6K9 419 aa19.12■□□□□ 0.65
SATB1-201ENST00000338745 CETN1Q12798 172 aa19.12■□□□□ 0.65
SATB1-201ENST00000338745 CCDC102BQ68D86 513 aa19.12■□□□□ 0.65
SATB1-201ENST00000338745 TBC1D5Q92609 795 aa19.12■□□□□ 0.65
SATB1-201ENST00000338745 TMX3Q96JJ7 454 aa19.12■□□□□ 0.65
SATB1-201ENST00000338745 KAT6BQ8WYB5 2073 aa19.12■□□□□ 0.65
SATB1-201ENST00000338745 N4BP3O15049 544 aa19.12■□□□□ 0.65
SATB1-201ENST00000338745 MICALL1Q8N3F8 863 aa19.12■□□□□ 0.65
SATB1-201ENST00000338745 ARFGAP3Q9NP61 516 aa19.12■□□□□ 0.65
SATB1-201ENST00000338745 ORC3Q9UBD5 711 aaPredicted RBP19.12■□□□□ 0.65
SATB1-201ENST00000338745 KIF20AO95235 890 aa19.12■□□□□ 0.65
SATB1-201ENST00000338745 IFI16Q16666 785 aaKnown RBP19.12■□□□□ 0.65
SATB1-201ENST00000338745 KIAA0753Q2KHM9 967 aa19.12■□□□□ 0.65
SATB1-201ENST00000338745 KAT14Q9H8E8 782 aa19.12■□□□□ 0.65
SATB1-201ENST00000338745 CCDC160A6NGH7 325 aa19.12■□□□□ 0.65
SATB1-201ENST00000338745 BBXQ8WY36 941 aaPredicted RBP19.12■□□□□ 0.65
SATB1-201ENST00000338745 CAPZA3Q96KX2 299 aa19.12■□□□□ 0.65
SATB1-201ENST00000338745 TSNARE1Q96NA8 513 aa19.12■□□□□ 0.65
SATB1-201ENST00000338745 CTAGE9A4FU28 777 aa19.11■□□□□ 0.65
SATB1-201ENST00000338745 SKILP12757 684 aa19.11■□□□□ 0.65
SATB1-201ENST00000338745 EHBP1Q8NDI1 1231 aa19.11■□□□□ 0.65
SATB1-201ENST00000338745 LRRC2Q9BYS8 371 aa19.11■□□□□ 0.65
SATB1-201ENST00000338745 PIP4K2BP78356 416 aa19.11■□□□□ 0.65
SATB1-201ENST00000338745 MFSD6Q6ZSS7 791 aa19.11■□□□□ 0.65
SATB1-201ENST00000338745 APBB1IPQ7Z5R6 666 aaPredicted RBP19.11■□□□□ 0.65
SATB1-201ENST00000338745 RGS22Q8NE09 1264 aa19.11■□□□□ 0.65
SATB1-201ENST00000338745 HYPKQ9NX55 129 aa19.11■□□□□ 0.65
SATB1-201ENST00000338745 STAT6P42226 847 aa19.11■□□□□ 0.65
SATB1-201ENST00000338745 JARID2Q92833 1246 aaPredicted RBP19.11■□□□□ 0.65
SATB1-201ENST00000338745 SAMM50Q9Y512 469 aa19.11■□□□□ 0.65
SATB1-201ENST00000338745 VPS18Q9P253 973 aa19.11■□□□□ 0.65
SATB1-201ENST00000338745 TRMT112Q9UI30 125 aaKnown RBP19.11■□□□□ 0.65
SATB1-201ENST00000338745 SELENOSQ9BQE4 189 aa19.1■□□□□ 0.65
SATB1-201ENST00000338745 MYCNP04198 464 aaPredicted RBP19.1■□□□□ 0.65
SATB1-201ENST00000338745 IVLP07476 585 aa19.1■□□□□ 0.65
SATB1-201ENST00000338745 GRIN2BQ13224 1484 aa19.1■□□□□ 0.65
SATB1-201ENST00000338745 DDX23Q9BUQ8 820 aaKnown RBP19.1■□□□□ 0.65
SATB1-201ENST00000338745 NSRP1Q9H0G5 558 aaKnown RBP19.1■□□□□ 0.65
SATB1-201ENST00000338745 ZSCAN16Q9H4T2 348 aaPredicted RBP19.1■□□□□ 0.65
SATB1-201ENST00000338745 ABCC11Q96J66 1382 aa19.1■□□□□ 0.65
SATB1-201ENST00000338745 NUCB1Q02818 461 aa19.1■□□□□ 0.65
SATB1-201ENST00000338745 CCDC6Q16204 474 aa19.1■□□□□ 0.65
SATB1-201ENST00000338745 UBE2Q2Q8WVN8 375 aa19.1■□□□□ 0.65
SATB1-201ENST00000338745 DCAF8L1A6NGE4 600 aa19.09■□□□□ 0.65
SATB1-201ENST00000338745 NCOA7Q8NI08 942 aa19.09■□□□□ 0.65
SATB1-201ENST00000338745 BICD1Q96G01 975 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms