RNA–Protein interactions for RNA: ENST00000338684.9

MUC1-202, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-202ENST00000338684 CCDC27Q2M243 656 aa19.42■□□□□ 0.7
MUC1-202ENST00000338684 PROSER3Q2NL68 480 aa19.42■□□□□ 0.7
MUC1-202ENST00000338684 KIF6Q6ZMV9 814 aa19.42■□□□□ 0.7
MUC1-202ENST00000338684 SYNE4Q8N205 404 aa19.42■□□□□ 0.7
MUC1-202ENST00000338684 NYXQ9GZU5 481 aa19.42■□□□□ 0.7
MUC1-202ENST00000338684 ZNF541Q9H0D2 1346 aa19.42■□□□□ 0.7
MUC1-202ENST00000338684 SNED1Q8TER0 1413 aa19.42■□□□□ 0.7
MUC1-202ENST00000338684 ANXA1P04083 346 aa19.41■□□□□ 0.7
MUC1-202ENST00000338684 EIF2S2P20042 333 aaKnown RBP19.41■□□□□ 0.7
MUC1-202ENST00000338684 CHADLQ6NUI6 762 aa19.41■□□□□ 0.7
MUC1-202ENST00000338684 GIGYF2Q6Y7W6 1299 aaKnown RBP19.41■□□□□ 0.7
MUC1-202ENST00000338684 C3orf67Q6ZVT6 689 aa19.41■□□□□ 0.7
MUC1-202ENST00000338684 RTKN2Q8IZC4 609 aa19.41■□□□□ 0.7
MUC1-202ENST00000338684 CALD1Q05682 793 aaKnown RBP19.4■□□□□ 0.7
MUC1-202ENST00000338684 L3MBTL3Q96JM7 780 aaPredicted RBP19.4■□□□□ 0.7
MUC1-202ENST00000338684 NTSR2O95665 410 aa19.39■□□□□ 0.69
MUC1-202ENST00000338684 HOXA10P31260 410 aaPredicted RBP19.39■□□□□ 0.69
MUC1-202ENST00000338684 IARSP41252 1262 aaKnown RBP19.39■□□□□ 0.69
MUC1-202ENST00000338684 COL13A1Q5TAT6 717 aaPredicted RBP19.39■□□□□ 0.69
MUC1-202ENST00000338684 TAF1DQ9H5J8 278 aaPredicted RBP19.39■□□□□ 0.69
MUC1-202ENST00000338684 ERBB4Q15303 1308 aa19.39■□□□□ 0.69
MUC1-202ENST00000338684 FZD9O00144 591 aa19.38■□□□□ 0.69
MUC1-202ENST00000338684 KRT24Q2M2I5 525 aa19.37■□□□□ 0.69
MUC1-202ENST00000338684 WWC1Q8IX03 1113 aa19.37■□□□□ 0.69
MUC1-202ENST00000338684 NECTIN2Q92692 538 aa19.37■□□□□ 0.69
MUC1-202ENST00000338684 BABAM1Q9NWV8 329 aa19.37■□□□□ 0.69
MUC1-202ENST00000338684 IBTKQ9P2D0 1353 aaPredicted RBP19.36■□□□□ 0.69
MUC1-202ENST00000338684 TCERG1O14776 1098 aaKnown RBP19.36■□□□□ 0.69
MUC1-202ENST00000338684 RPGRQ92834 1020 aaKnown RBP19.36■□□□□ 0.69
MUC1-202ENST00000338684 PSMD1Q99460 953 aa19.36■□□□□ 0.69
MUC1-202ENST00000338684 SALL2Q9Y467 1007 aaPredicted RBP19.36■□□□□ 0.69
MUC1-202ENST00000338684 COL4A5P29400 1685 aa19.36■□□□□ 0.69
MUC1-202ENST00000338684 RIC1Q4ADV7 1423 aa19.35■□□□□ 0.69
MUC1-202ENST00000338684 IQCA1LA6NCM1 817 aa19.35■□□□□ 0.69
MUC1-202ENST00000338684 SCN4AP35499 1836 aa19.35■□□□□ 0.69
MUC1-202ENST00000338684 CHL1O00533 1208 aa19.34■□□□□ 0.69
MUC1-202ENST00000338684 ITGBL1O95965 494 aaPredicted RBP19.34■□□□□ 0.69
MUC1-202ENST00000338684 SLC10A5Q5PT55 438 aa19.34■□□□□ 0.69
MUC1-202ENST00000338684 COPS6Q7L5N1 327 aa19.34■□□□□ 0.69
MUC1-202ENST00000338684 PPP1R42Q7Z4L9 355 aa19.34■□□□□ 0.69
MUC1-202ENST00000338684 LDHDQ86WU2 507 aa19.34■□□□□ 0.69
MUC1-202ENST00000338684 CRAMP1Q96RY5 1269 aa19.34■□□□□ 0.69
MUC1-202ENST00000338684 RNF123Q5XPI4 1314 aa19.33■□□□□ 0.69
MUC1-202ENST00000338684 PASKQ96RG2 1323 aa19.33■□□□□ 0.69
MUC1-202ENST00000338684 AIMP1Q12904 312 aaKnown RBP19.33■□□□□ 0.68
MUC1-202ENST00000338684 PARP10Q53GL7 1025 aa19.33■□□□□ 0.68
MUC1-202ENST00000338684 EAPPQ56P03 285 aaPredicted RBP19.33■□□□□ 0.68
MUC1-202ENST00000338684 CC2D2BQ6DHV5 1058 aa19.33■□□□□ 0.68
MUC1-202ENST00000338684 WDR63Q8IWG1 891 aa19.33■□□□□ 0.68
MUC1-202ENST00000338684 XAGE3Q8WTP9 111 aa19.33■□□□□ 0.68
MUC1-202ENST00000338684 RBM17Q96I25 401 aaKnown RBP19.33■□□□□ 0.68
MUC1-202ENST00000338684 CFAP44Q96MT7 982 aa19.33■□□□□ 0.68
MUC1-202ENST00000338684 CREBZFQ9NS37 354 aa19.33■□□□□ 0.68
MUC1-202ENST00000338684 HACL1Q9UJ83 578 aa19.33■□□□□ 0.68
MUC1-202ENST00000338684 IL16Q14005 1332 aa19.32■□□□□ 0.68
MUC1-202ENST00000338684 HSPA1AP0DMV8 641 aaKnown RBP19.32■□□□□ 0.68
MUC1-202ENST00000338684 HSPA1BP0DMV9 641 aaKnown RBP19.32■□□□□ 0.68
MUC1-202ENST00000338684 EPHX2P34913 555 aa19.32■□□□□ 0.68
MUC1-202ENST00000338684 GNAI1P63096 354 aa19.32■□□□□ 0.68
MUC1-202ENST00000338684 NLRP3Q96P20 1036 aa19.32■□□□□ 0.68
MUC1-202ENST00000338684 UTP14AQ9BVJ6 771 aaKnown RBP19.32■□□□□ 0.68
MUC1-202ENST00000338684 IFT57Q9NWB7 429 aa19.32■□□□□ 0.68
MUC1-202ENST00000338684 MKRN1Q9UHC7 482 aaKnown RBP19.32■□□□□ 0.68
MUC1-202ENST00000338684 LAS1LQ9Y4W2 734 aaKnown RBP19.32■□□□□ 0.68
MUC1-202ENST00000338684 PPEF1O14829 653 aaPredicted RBP19.31■□□□□ 0.68
MUC1-202ENST00000338684 GPC2Q8N158 579 aa19.31■□□□□ 0.68
MUC1-202ENST00000338684 NLRP10Q86W26 655 aa19.3■□□□□ 0.68
MUC1-202ENST00000338684 JDP2Q8WYK2 163 aa19.3■□□□□ 0.68
MUC1-202ENST00000338684 ZNF428Q96B54 188 aa19.3■□□□□ 0.68
MUC1-202ENST00000338684 CLEC11AQ9Y240 323 aa19.3■□□□□ 0.68
MUC1-202ENST00000338684 ZNF853P0CG23 659 aa19.29■□□□□ 0.68
MUC1-202ENST00000338684 HCLS1P14317 486 aaPredicted RBP19.29■□□□□ 0.68
MUC1-202ENST00000338684 HNRNPUQ00839 825 aaKnown RBP eCLIP19.29■□□□□ 0.68
MUC1-202ENST00000338684 DDX21Q9NR30 783 aaKnown RBP eCLIP19.29■□□□□ 0.68
MUC1-202ENST00000338684 GJA3Q9Y6H8 435 aa19.29■□□□□ 0.68
MUC1-202ENST00000338684 ADAMTSL1Q8N6G6 1762 aa19.29■□□□□ 0.68
MUC1-202ENST00000338684 ZNF521Q96K83 1311 aa19.28■□□□□ 0.68
MUC1-202ENST00000338684 TCIRG1Q13488 830 aa19.28■□□□□ 0.68
MUC1-202ENST00000338684 MAP1SQ66K74 1059 aaPredicted RBP19.28■□□□□ 0.68
MUC1-202ENST00000338684 LARGE2Q8N3Y3 721 aa19.28■□□□□ 0.68
MUC1-202ENST00000338684 CHPF2Q9P2E5 772 aa19.28■□□□□ 0.68
MUC1-202ENST00000338684 ABCC4O15439 1325 aa19.27■□□□□ 0.68
MUC1-202ENST00000338684 EIF6P56537 245 aaKnown RBP19.27■□□□□ 0.68
MUC1-202ENST00000338684 ATP6V0A2Q9Y487 856 aa19.27■□□□□ 0.68
MUC1-202ENST00000338684 LTBP1Q14766 1721 aa19.27■□□□□ 0.68
MUC1-202ENST00000338684 EPS15P42566 896 aa19.26■□□□□ 0.67
MUC1-202ENST00000338684 SCNN1DP51172 638 aa19.26■□□□□ 0.67
MUC1-202ENST00000338684 GRIPAP1Q4V328 841 aa19.26■□□□□ 0.67
MUC1-202ENST00000338684 PNMA8AQ86V59 439 aaPredicted RBP19.26■□□□□ 0.67
MUC1-202ENST00000338684 CNTROBQ8N137 903 aa19.26■□□□□ 0.67
MUC1-202ENST00000338684 MBIPQ9NS73 344 aa19.26■□□□□ 0.67
MUC1-202ENST00000338684 CNTNAP1P78357 1384 aa19.25■□□□□ 0.67
MUC1-202ENST00000338684 GOLGA2Q08379 1002 aa19.25■□□□□ 0.67
MUC1-202ENST00000338684 AOC3Q16853 763 aa19.25■□□□□ 0.67
MUC1-202ENST00000338684 HSP90AB3PQ58FF7 597 aa19.25■□□□□ 0.67
MUC1-202ENST00000338684 TRMT112Q9UI30 125 aaKnown RBP19.25■□□□□ 0.67
MUC1-202ENST00000338684 LAMB2P55268 1798 aa19.24■□□□□ 0.67
MUC1-202ENST00000338684 ANKRD36CQ5JPF3 1778 aa19.24■□□□□ 0.67
MUC1-202ENST00000338684 TMEM88BA6NKF7 163 aa19.24■□□□□ 0.67
MUC1-202ENST00000338684 PPIP5K2O43314 1243 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms