RNA–Protein interactions for RNA: ENST00000338684.9

MUC1-202, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-202ENST00000338684 KRTAP25-1Q3LHN0 102 aa5.61□□□□□ -1.51
MUC1-202ENST00000338684 KRTAP19-7Q3SYF9 63 aa5.57□□□□□ -1.52
MUC1-202ENST00000338684 LCE5AQ5TCM9 118 aa5.56□□□□□ -1.52
MUC1-202ENST00000338684 LCE3AQ5TA76 89 aa5.55□□□□□ -1.52
MUC1-202ENST00000338684 KRTAP4-9Q9BYQ8 210 aa5.54□□□□□ -1.52
MUC1-202ENST00000338684 ROMO1P60602 79 aa5.52□□□□□ -1.53
MUC1-202ENST00000338684 MT1EP04732 61 aa5.51□□□□□ -1.53
MUC1-202ENST00000338684 BRK1Q8WUW1 75 aa5.5□□□□□ -1.53
MUC1-202ENST00000338684 KRTAP19-5Q3LI72 72 aa5.49□□□□□ -1.53
MUC1-202ENST00000338684 KRTAP19-3Q7Z4W3 81 aa5.49□□□□□ -1.53
MUC1-202ENST00000338684 KRTAP4-12Q9BQ66 201 aa5.45□□□□□ -1.54
MUC1-202ENST00000338684 KRTAP23-1A1A580 65 aa5.43□□□□□ -1.54
MUC1-202ENST00000338684 LCE1DQ5T752 114 aa5.37□□□□□ -1.55
MUC1-202ENST00000338684 KRTAP12-3P60328 96 aa5.36□□□□□ -1.55
MUC1-202ENST00000338684 MT1GP13640 62 aa5.33□□□□□ -1.56
MUC1-202ENST00000338684 KRTAP9-9Q9BYP9 154 aa5.32□□□□□ -1.56
MUC1-202ENST00000338684 KRTAP9-4Q9BYQ2 154 aa5.32□□□□□ -1.56
MUC1-202ENST00000338684 PP632Q6XCG6 107 aa5.31□□□□□ -1.56
MUC1-202ENST00000338684 HMCN1Q96RW7 5635 aa5.3□□□□□ -1.56
MUC1-202ENST00000338684 MT1LQ93083 61 aa5.29□□□□□ -1.56
MUC1-202ENST00000338684 MT4P47944 62 aa5.27□□□□□ -1.57
MUC1-202ENST00000338684 MT1MQ8N339 61 aa5.26□□□□□ -1.57
MUC1-202ENST00000338684 LCE4AQ5TA78 99 aa5.25□□□□□ -1.57
MUC1-202ENST00000338684 AHNAK2Q8IVF2 5795 aa5.24□□□□□ -1.57
MUC1-202ENST00000338684 KRTAP4-3Q9BYR4 195 aa5.21□□□□□ -1.58
MUC1-202ENST00000338684 PMAIP1Q13794 54 aa5.2□□□□□ -1.58
MUC1-202ENST00000338684 KRTAP5-10Q6L8G5 202 aa5.19□□□□□ -1.58
MUC1-202ENST00000338684 KRTAP5-4Q6L8H1 288 aa5.16□□□□□ -1.58
MUC1-202ENST00000338684 KRTAP15-1Q3LI76 137 aa5.14□□□□□ -1.59
MUC1-202ENST00000338684 PRO0628Q9UI54 55 aa5.14□□□□□ -1.59
MUC1-202ENST00000338684 KRTAP19-4Q3LI73 84 aa5.13□□□□□ -1.59
MUC1-202ENST00000338684 KRTAP5-7Q6L8G8 165 aa5.03□□□□□ -1.6
MUC1-202ENST00000338684 KRTAP4-7Q9BYR0 210 aa5.02□□□□□ -1.61
MUC1-202ENST00000338684 SVIPQ8NHG7 77 aa5□□□□□ -1.61
MUC1-202ENST00000338684 H3BS24 57 aa4.99□□□□□ -1.61
MUC1-202ENST00000338684 LCE3CQ5T5A8 94 aa4.97□□□□□ -1.61
MUC1-202ENST00000338684 KRTAP5-3Q6L8H2 238 aa4.97□□□□□ -1.61
MUC1-202ENST00000338684 KRTAP20-2Q3LI61 65 aa4.88□□□□□ -1.63
MUC1-202ENST00000338684 PRAC1Q96KF2 57 aa4.88□□□□□ -1.63
MUC1-202ENST00000338684 KRTAP5-5Q701N2 237 aaPredicted RBP4.86□□□□□ -1.63
MUC1-202ENST00000338684 KTN1-AS1Q86SY8 53 aa4.82□□□□□ -1.64
MUC1-202ENST00000338684 KRTAP4-2Q9BYR5 136 aa4.8□□□□□ -1.64
MUC1-202ENST00000338684 SPRR5A0A1B0GTR4 108 aa4.79□□□□□ -1.64
MUC1-202ENST00000338684 SYNE1Q8NF91 8797 aaKnown RBP4.77□□□□□ -1.65
MUC1-202ENST00000338684 KRTAP12-4P60329 112 aa4.73□□□□□ -1.65
MUC1-202ENST00000338684 KRTAP4-11Q9BYQ6 195 aa4.73□□□□□ -1.65
MUC1-202ENST00000338684 KRTAP9-6A8MVA2 160 aa4.64□□□□□ -1.67
MUC1-202ENST00000338684 MT1AP04731 61 aa4.52□□□□□ -1.69
MUC1-202ENST00000338684 KRTAP5-2Q701N4 177 aa4.47□□□□□ -1.69
MUC1-202ENST00000338684 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.7
MUC1-202ENST00000338684 AHNAKQ09666 5890 aaKnown RBP4.39□□□□□ -1.71
MUC1-202ENST00000338684 MUC5ACP98088 5654 aa4.38□□□□□ -1.71
MUC1-202ENST00000338684 MUC5BQ9HC84 5762 aaPredicted RBP4.38□□□□□ -1.71
MUC1-202ENST00000338684 KRTAP5-8O75690 187 aa4.38□□□□□ -1.71
MUC1-202ENST00000338684 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
MUC1-202ENST00000338684 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
MUC1-202ENST00000338684 MT3P25713 68 aa4.13□□□□□ -1.75
MUC1-202ENST00000338684 LUZP6Q538Z0 58 aa4.13□□□□□ -1.75
MUC1-202ENST00000338684 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
MUC1-202ENST00000338684 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
MUC1-202ENST00000338684 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
MUC1-202ENST00000338684 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
MUC1-202ENST00000338684 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
MUC1-202ENST00000338684 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.83
MUC1-202ENST00000338684 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
MUC1-202ENST00000338684 LCE1CQ5T751 118 aa3.5□□□□□ -1.85
MUC1-202ENST00000338684 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
MUC1-202ENST00000338684 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
MUC1-202ENST00000338684 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
MUC1-202ENST00000338684 INE1O15225 51 aa3.02□□□□□ -1.93
MUC1-202ENST00000338684 PHGR1C9JFL3 82 aa3□□□□□ -1.93
MUC1-202ENST00000338684 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
MUC1-202ENST00000338684 PRM1P04553 51 aa2.82□□□□□ -1.96
MUC1-202ENST00000338684 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
MUC1-202ENST00000338684 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
MUC1-202ENST00000338684 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
MUC1-202ENST00000338684 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 110.6 ms