RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 SPINK5Q9NQ38 1064 aaPredicted RBP14.51□□□□□ -0.09
SLC28A1-202ENST00000338602 TRMT112Q9UI30 125 aaKnown RBP14.51□□□□□ -0.09
SLC28A1-202ENST00000338602 KIAA1551Q9HCM1 1747 aa14.51□□□□□ -0.09
SLC28A1-202ENST00000338602 NTSR2O95665 410 aa14.5□□□□□ -0.09
SLC28A1-202ENST00000338602 NLRP3Q96P20 1036 aa14.5□□□□□ -0.09
SLC28A1-202ENST00000338602 KLRG2A4D1S0 409 aaPredicted RBP14.49□□□□□ -0.09
SLC28A1-202ENST00000338602 TCERG1O14776 1098 aaKnown RBP14.49□□□□□ -0.09
SLC28A1-202ENST00000338602 ALDH1B1P30837 517 aa14.49□□□□□ -0.09
SLC28A1-202ENST00000338602 RPGRQ92834 1020 aaKnown RBP14.49□□□□□ -0.09
SLC28A1-202ENST00000338602 SH3TC1Q8TE82 1336 aa14.49□□□□□ -0.09
SLC28A1-202ENST00000338602 HSP90B1P14625 803 aaKnown RBP14.48□□□□□ -0.09
SLC28A1-202ENST00000338602 NEXNQ0ZGT2 675 aa14.48□□□□□ -0.09
SLC28A1-202ENST00000338602 TRIM28Q13263 835 aaKnown RBP14.48□□□□□ -0.09
SLC28A1-202ENST00000338602 SOGA3Q5TF21 947 aa14.48□□□□□ -0.09
SLC28A1-202ENST00000338602 KSR2Q6VAB6 950 aa14.48□□□□□ -0.09
SLC28A1-202ENST00000338602 ISCA1Q9BUE6 129 aa14.48□□□□□ -0.09
SLC28A1-202ENST00000338602 RIC1Q4ADV7 1423 aa14.48□□□□□ -0.09
SLC28A1-202ENST00000338602 ATP5J2-PTCD1G3V325 749 aa14.47□□□□□ -0.09
SLC28A1-202ENST00000338602 PRELPP51888 382 aa14.47□□□□□ -0.09
SLC28A1-202ENST00000338602 SLFN5Q08AF3 891 aa14.47□□□□□ -0.09
SLC28A1-202ENST00000338602 SLC10A5Q5PT55 438 aa14.47□□□□□ -0.09
SLC28A1-202ENST00000338602 MYD88Q99836 296 aa14.47□□□□□ -0.09
SLC28A1-202ENST00000338602 METTL22Q9BUU2 404 aaPredicted RBP14.47□□□□□ -0.09
SLC28A1-202ENST00000338602 MAP3K2Q9Y2U5 619 aa14.47□□□□□ -0.09
SLC28A1-202ENST00000338602 BRCA1P38398 1863 aaKnown RBP14.47□□□□□ -0.09
SLC28A1-202ENST00000338602 ANKRD31Q8N7Z5 1873 aa14.47□□□□□ -0.09
SLC28A1-202ENST00000338602 PI4KAP2A4QPH2 592 aa14.47□□□□□ -0.09
SLC28A1-202ENST00000338602 APLP1P51693 650 aa14.47□□□□□ -0.09
SLC28A1-202ENST00000338602 FLIIQ13045 1269 aa14.47□□□□□ -0.09
SLC28A1-202ENST00000338602 FKBP5Q13451 457 aaPredicted RBP14.47□□□□□ -0.09
SLC28A1-202ENST00000338602 COL13A1Q5TAT6 717 aaPredicted RBP14.47□□□□□ -0.09
SLC28A1-202ENST00000338602 PI4KAP1Q8N8J0 262 aa14.47□□□□□ -0.09
SLC28A1-202ENST00000338602 CCDC191Q8NCU4 936 aa14.47□□□□□ -0.09
SLC28A1-202ENST00000338602 RBM17Q96I25 401 aaKnown RBP14.47□□□□□ -0.09
SLC28A1-202ENST00000338602 ABCC12Q96J65 1359 aa14.46□□□□□ -0.09
SLC28A1-202ENST00000338602 ARFGEF1Q9Y6D6 1849 aa14.46□□□□□ -0.09
SLC28A1-202ENST00000338602 CRY2Q49AN0 593 aa14.46□□□□□ -0.1
SLC28A1-202ENST00000338602 PRPF40BQ6NWY9 871 aaKnown RBP14.46□□□□□ -0.1
SLC28A1-202ENST00000338602 ZNF428Q96B54 188 aa14.46□□□□□ -0.1
SLC28A1-202ENST00000338602 TMX4Q9H1E5 349 aaPredicted RBP14.46□□□□□ -0.1
SLC28A1-202ENST00000338602 CWC25Q9NXE8 425 aaPredicted RBP14.46□□□□□ -0.1
SLC28A1-202ENST00000338602 ZNF219Q9P2Y4 722 aaPredicted RBP14.46□□□□□ -0.1
SLC28A1-202ENST00000338602 ANKRD36CQ5JPF3 1778 aa14.45□□□□□ -0.1
SLC28A1-202ENST00000338602 DLEC1Q9Y238 1755 aa14.45□□□□□ -0.1
SLC28A1-202ENST00000338602 C21orf2O43822 256 aa14.45□□□□□ -0.1
SLC28A1-202ENST00000338602 HOXA10P31260 410 aaPredicted RBP14.45□□□□□ -0.1
SLC28A1-202ENST00000338602 ZNF526Q8TF50 670 aaPredicted RBP14.45□□□□□ -0.1
SLC28A1-202ENST00000338602 SLC34A2O95436 690 aa14.44□□□□□ -0.1
SLC28A1-202ENST00000338602 HCLS1P14317 486 aaPredicted RBP14.44□□□□□ -0.1
SLC28A1-202ENST00000338602 HNRNPUQ00839 825 aaKnown RBP eCLIP14.44□□□□□ -0.1
SLC28A1-202ENST00000338602 G2E3Q7L622 706 aa14.44□□□□□ -0.1
SLC28A1-202ENST00000338602 TNS4Q8IZW8 715 aa14.44□□□□□ -0.1
SLC28A1-202ENST00000338602 DNAJC5GQ8N7S2 189 aa14.44□□□□□ -0.1
SLC28A1-202ENST00000338602 ZBTB38Q8NAP3 1195 aaPredicted RBP14.44□□□□□ -0.1
SLC28A1-202ENST00000338602 FAM89AQ96GI7 184 aa14.44□□□□□ -0.1
SLC28A1-202ENST00000338602 CRAMP1Q96RY5 1269 aa14.44□□□□□ -0.1
SLC28A1-202ENST00000338602 CACNA1FO60840 1977 aa14.43□□□□□ -0.1
SLC28A1-202ENST00000338602 CT47B1P0C2W7 299 aaPredicted RBP14.43□□□□□ -0.1
SLC28A1-202ENST00000338602 CCDC93Q567U6 631 aa14.43□□□□□ -0.1
SLC28A1-202ENST00000338602 CC2D2BQ6DHV5 1058 aa14.43□□□□□ -0.1
SLC28A1-202ENST00000338602 DDX46Q7L014 1031 aaKnown RBP14.43□□□□□ -0.1
SLC28A1-202ENST00000338602 DNAAF4Q8WXU2 420 aa14.43□□□□□ -0.1
SLC28A1-202ENST00000338602 CDCA7LQ96GN5 454 aa14.43□□□□□ -0.1
SLC28A1-202ENST00000338602 ARFGEF2Q9Y6D5 1785 aa14.43□□□□□ -0.1
SLC28A1-202ENST00000338602 COL11A2P13942 1736 aaPredicted RBP14.42□□□□□ -0.1
SLC28A1-202ENST00000338602 IRS4O14654 1257 aaPredicted RBP14.42□□□□□ -0.1
SLC28A1-202ENST00000338602 PCCAP05165 728 aaPredicted RBP14.42□□□□□ -0.1
SLC28A1-202ENST00000338602 LMNB1P20700 586 aa14.42□□□□□ -0.1
SLC28A1-202ENST00000338602 GRIPAP1Q4V328 841 aa14.42□□□□□ -0.1
SLC28A1-202ENST00000338602 C9orf131Q5VYM1 1079 aa14.42□□□□□ -0.1
SLC28A1-202ENST00000338602 RTKN2Q8IZC4 609 aa14.42□□□□□ -0.1
SLC28A1-202ENST00000338602 ADCY9O60503 1353 aa14.41□□□□□ -0.1
SLC28A1-202ENST00000338602 RTL5Q5HYW3 569 aaPredicted RBP14.41□□□□□ -0.1
SLC28A1-202ENST00000338602 TRMT2AQ8IZ69 625 aaKnown RBP14.41□□□□□ -0.1
SLC28A1-202ENST00000338602 TAOK3Q9H2K8 898 aa14.41□□□□□ -0.1
SLC28A1-202ENST00000338602 RNF181Q9P0P0 153 aa14.41□□□□□ -0.1
SLC28A1-202ENST00000338602 BBOX1O75936 387 aa14.4□□□□□ -0.1
SLC28A1-202ENST00000338602 ALDH1L2Q3SY69 923 aa14.4□□□□□ -0.1
SLC28A1-202ENST00000338602 SYNE4Q8N205 404 aa14.4□□□□□ -0.1
SLC28A1-202ENST00000338602 LINS1Q8NG48 757 aa14.4□□□□□ -0.1
SLC28A1-202ENST00000338602 C7orf43Q8WVR3 580 aa14.4□□□□□ -0.1
SLC28A1-202ENST00000338602 LTBP3Q9NS15 1303 aa14.39□□□□□ -0.11
SLC28A1-202ENST00000338602 NEURL1BA8MQ27 555 aa14.39□□□□□ -0.11
SLC28A1-202ENST00000338602 PPEF1O14829 653 aaPredicted RBP14.39□□□□□ -0.11
SLC28A1-202ENST00000338602 RASSF7Q02833 373 aa14.39□□□□□ -0.11
SLC28A1-202ENST00000338602 SF3B3Q15393 1217 aaKnown RBP14.39□□□□□ -0.11
SLC28A1-202ENST00000338602 C3orf67Q6ZVT6 689 aa14.39□□□□□ -0.11
SLC28A1-202ENST00000338602 TNRC6CQ9HCJ0 1690 aaKnown RBP14.38□□□□□ -0.11
SLC28A1-202ENST00000338602 ZC3H4Q9UPT8 1303 aaKnown RBP14.38□□□□□ -0.11
SLC28A1-202ENST00000338602 NFKBIEO00221 500 aa14.38□□□□□ -0.11
SLC28A1-202ENST00000338602 PDE8AO60658 829 aa14.38□□□□□ -0.11
SLC28A1-202ENST00000338602 IGKV5-2P06315 115 aa14.38□□□□□ -0.11
SLC28A1-202ENST00000338602 CWF19L2Q2TBE0 894 aaKnown RBP14.38□□□□□ -0.11
SLC28A1-202ENST00000338602 CCDC152Q4G0S7 254 aa14.38□□□□□ -0.11
SLC28A1-202ENST00000338602 TMC4Q7Z404 712 aa14.38□□□□□ -0.11
SLC28A1-202ENST00000338602 SLX4Q8IY92 1834 aa14.38□□□□□ -0.11
SLC28A1-202ENST00000338602 ABCC4O15439 1325 aa14.37□□□□□ -0.11
SLC28A1-202ENST00000338602 PTPRCP08575 1304 aa14.37□□□□□ -0.11
SLC28A1-202ENST00000338602 CDHR2Q9BYE9 1310 aa14.37□□□□□ -0.11
SLC28A1-202ENST00000338602 FKBP4Q02790 459 aaKnown RBP eCLIP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms