RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 ZNF34Q8IZ26 560 aa18.33■□□□□ 0.53
CDK5RAP3-201ENST00000338399 RTCBQ9Y3I0 505 aaKnown RBP18.33■□□□□ 0.53
CDK5RAP3-201ENST00000338399 TXNRD1Q16881 649 aa18.32■□□□□ 0.52
CDK5RAP3-201ENST00000338399 AMIGO3Q86WK7 504 aa18.32■□□□□ 0.52
CDK5RAP3-201ENST00000338399 AK7Q96M32 723 aa18.32■□□□□ 0.52
CDK5RAP3-201ENST00000338399 UBN2Q6ZU65 1347 aa18.32■□□□□ 0.52
CDK5RAP3-201ENST00000338399 SURF6O75683 361 aaKnown RBP18.31■□□□□ 0.52
CDK5RAP3-201ENST00000338399 PCCAP05165 728 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP3-201ENST00000338399 PROM2Q8N271 834 aa18.31■□□□□ 0.52
CDK5RAP3-201ENST00000338399 ZBTB38Q8NAP3 1195 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP3-201ENST00000338399 FAM89AQ96GI7 184 aa18.31■□□□□ 0.52
CDK5RAP3-201ENST00000338399 BCL11AQ9H165 835 aa18.31■□□□□ 0.52
CDK5RAP3-201ENST00000338399 ZBTB47Q9UFB7 747 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP3-201ENST00000338399 PLSCR1O15162 318 aa18.31■□□□□ 0.52
CDK5RAP3-201ENST00000338399 SMARCA5O60264 1052 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP3-201ENST00000338399 TNS1Q9HBL0 1735 aaKnown RBP18.31■□□□□ 0.52
CDK5RAP3-201ENST00000338399 FOXO4P98177 505 aa18.3■□□□□ 0.52
CDK5RAP3-201ENST00000338399 RABL6Q3YEC7 729 aaPredicted RBP18.3■□□□□ 0.52
CDK5RAP3-201ENST00000338399 ZNF652Q9Y2D9 606 aa18.3■□□□□ 0.52
CDK5RAP3-201ENST00000338399 SCN7AQ01118 1682 aa18.29■□□□□ 0.52
CDK5RAP3-201ENST00000338399 PHF14O94880 888 aa18.29■□□□□ 0.52
CDK5RAP3-201ENST00000338399 CLEC4GQ6UXB4 293 aa18.29■□□□□ 0.52
CDK5RAP3-201ENST00000338399 ARHGEF1Q92888 912 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP3-201ENST00000338399 NARFQ9UHQ1 456 aa18.29■□□□□ 0.52
CDK5RAP3-201ENST00000338399 TRMT112Q9UI30 125 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP3-201ENST00000338399 LMBR1LQ6UX01 489 aa18.29■□□□□ 0.52
CDK5RAP3-201ENST00000338399 SYNE4Q8N205 404 aa18.29■□□□□ 0.52
CDK5RAP3-201ENST00000338399 SRP68Q9UHB9 627 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP3-201ENST00000338399 PA2G4Q9UQ80 394 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP3-201ENST00000338399 NIP7Q9Y221 180 aaKnown RBP eCLIP18.29■□□□□ 0.52
CDK5RAP3-201ENST00000338399 UBR3Q6ZT12 1888 aa18.28■□□□□ 0.52
CDK5RAP3-201ENST00000338399 ZPR1O75312 459 aa18.28■□□□□ 0.52
CDK5RAP3-201ENST00000338399 TRAPPC3LQ5T215 181 aa18.28■□□□□ 0.52
CDK5RAP3-201ENST00000338399 SUSD4Q5VX71 490 aa18.28■□□□□ 0.52
CDK5RAP3-201ENST00000338399 USPL1Q5W0Q7 1092 aa18.28■□□□□ 0.52
CDK5RAP3-201ENST00000338399 LRRCC1Q9C099 1032 aa18.28■□□□□ 0.52
CDK5RAP3-201ENST00000338399 C4AP0C0L4 1744 aa18.27■□□□□ 0.52
CDK5RAP3-201ENST00000338399 FAM177BA6PVY3 158 aa18.27■□□□□ 0.52
CDK5RAP3-201ENST00000338399 C16orf71Q8IYS4 520 aaPredicted RBP18.27■□□□□ 0.52
CDK5RAP3-201ENST00000338399 BCL2L12Q9HB09 334 aa18.27■□□□□ 0.52
CDK5RAP3-201ENST00000338399 NOP58Q9Y2X3 529 aaKnown RBP18.27■□□□□ 0.52
CDK5RAP3-201ENST00000338399 CHMP3Q9Y3E7 222 aa18.27■□□□□ 0.52
CDK5RAP3-201ENST00000338399 CDHR2Q9BYE9 1310 aa18.27■□□□□ 0.52
CDK5RAP3-201ENST00000338399 RAB11FIP3O75154 756 aa18.26■□□□□ 0.51
CDK5RAP3-201ENST00000338399 PARP10Q53GL7 1025 aa18.26■□□□□ 0.51
CDK5RAP3-201ENST00000338399 RFC4P35249 363 aa18.26■□□□□ 0.51
CDK5RAP3-201ENST00000338399 HSP90AB4PQ58FF6 505 aa18.26■□□□□ 0.51
CDK5RAP3-201ENST00000338399 ILDR1Q86SU0 546 aaPredicted RBP18.26■□□□□ 0.51
CDK5RAP3-201ENST00000338399 KLHDC4Q8TBB5 520 aa18.26■□□□□ 0.51
CDK5RAP3-201ENST00000338399 RGL2O15211 777 aa18.25■□□□□ 0.51
CDK5RAP3-201ENST00000338399 RFX5P48382 616 aaPredicted RBP18.25■□□□□ 0.51
CDK5RAP3-201ENST00000338399 OS9Q13438 667 aaPredicted RBP18.25■□□□□ 0.51
CDK5RAP3-201ENST00000338399 UTP14AQ9BVJ6 771 aaKnown RBP18.25■□□□□ 0.51
CDK5RAP3-201ENST00000338399 PLA2G12BQ9BX93 195 aa18.25■□□□□ 0.51
CDK5RAP3-201ENST00000338399 TSHZ2Q9NRE2 1034 aa18.25■□□□□ 0.51
CDK5RAP3-201ENST00000338399 MYH3P11055 1940 aa18.25■□□□□ 0.51
CDK5RAP3-201ENST00000338399 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.24■□□□□ 0.51
CDK5RAP3-201ENST00000338399 IRS4O14654 1257 aaPredicted RBP18.24■□□□□ 0.51
CDK5RAP3-201ENST00000338399 RHPN1Q8TCX5 695 aa18.24■□□□□ 0.51
CDK5RAP3-201ENST00000338399 ADRA2BP18089 450 aa18.24■□□□□ 0.51
CDK5RAP3-201ENST00000338399 HMGB2P26583 209 aaKnown RBP18.24■□□□□ 0.51
CDK5RAP3-201ENST00000338399 TBC1D9BQ66K14 1250 aa18.24■□□□□ 0.51
CDK5RAP3-201ENST00000338399 BICDL1Q6ZP65 573 aa18.24■□□□□ 0.51
CDK5RAP3-201ENST00000338399 OTUD7AQ8TE49 926 aaPredicted RBP18.24■□□□□ 0.51
CDK5RAP3-201ENST00000338399 KIF1BPQ96EK5 621 aa18.24■□□□□ 0.51
CDK5RAP3-201ENST00000338399 SIL1Q9H173 461 aa18.24■□□□□ 0.51
CDK5RAP3-201ENST00000338399 USP42Q9H9J4 1324 aaKnown RBP18.24■□□□□ 0.51
CDK5RAP3-201ENST00000338399 PTPN12Q05209 780 aaKnown RBP18.23■□□□□ 0.51
CDK5RAP3-201ENST00000338399 G3BP1Q13283 466 aaKnown RBP eCLIP18.23■□□□□ 0.51
CDK5RAP3-201ENST00000338399 PLEKHM2Q8IWE5 1019 aa18.23■□□□□ 0.51
CDK5RAP3-201ENST00000338399 IL1RAPL2Q9NP60 686 aa18.23■□□□□ 0.51
CDK5RAP3-201ENST00000338399 COPRSQ9NQ92 184 aa18.23■□□□□ 0.51
CDK5RAP3-201ENST00000338399 SH3TC1Q8TE82 1336 aa18.23■□□□□ 0.51
CDK5RAP3-201ENST00000338399 RGPD3A6NKT7 1758 aaPredicted RBP18.22■□□□□ 0.51
CDK5RAP3-201ENST00000338399 RGPD4Q7Z3J3 1758 aa18.22■□□□□ 0.51
CDK5RAP3-201ENST00000338399 NTSR2O95665 410 aa18.22■□□□□ 0.51
CDK5RAP3-201ENST00000338399 SSFA2P28290 1259 aa18.22■□□□□ 0.51
CDK5RAP3-201ENST00000338399 CCDC85AQ96PX6 553 aaPredicted RBP18.22■□□□□ 0.51
CDK5RAP3-201ENST00000338399 PDE8AO60658 829 aa18.21■□□□□ 0.51
CDK5RAP3-201ENST00000338399 CSF1RP07333 972 aa18.21■□□□□ 0.51
CDK5RAP3-201ENST00000338399 NUTM1Q86Y26 1132 aa18.21■□□□□ 0.51
CDK5RAP3-201ENST00000338399 ERC1Q8IUD2 1116 aa18.21■□□□□ 0.51
CDK5RAP3-201ENST00000338399 CTSWP56202 376 aa18.2■□□□□ 0.5
CDK5RAP3-201ENST00000338399 ZNF827Q17R98 1081 aa18.2■□□□□ 0.5
CDK5RAP3-201ENST00000338399 TTLL11Q8NHH1 800 aa18.2■□□□□ 0.5
CDK5RAP3-201ENST00000338399 SETDB2Q96T68 719 aa18.2■□□□□ 0.5
CDK5RAP3-201ENST00000338399 DDX60Q8IY21 1712 aaKnown RBP18.2■□□□□ 0.5
CDK5RAP3-201ENST00000338399 SASH1O94885 1247 aa18.2■□□□□ 0.5
CDK5RAP3-201ENST00000338399 HCLS1P14317 486 aaPredicted RBP18.2■□□□□ 0.5
CDK5RAP3-201ENST00000338399 FAM161AQ3B820 660 aa18.2■□□□□ 0.5
CDK5RAP3-201ENST00000338399 EN1Q05925 392 aaPredicted RBP18.19■□□□□ 0.5
CDK5RAP3-201ENST00000338399 CCDC57Q2TAC2 916 aa18.19■□□□□ 0.5
CDK5RAP3-201ENST00000338399 AKT1S1Q96B36 256 aa18.19■□□□□ 0.5
CDK5RAP3-201ENST00000338399 ZNF594Q96JF6 807 aaPredicted RBP18.19■□□□□ 0.5
CDK5RAP3-201ENST00000338399 TFCP2L1Q9NZI6 479 aa18.19■□□□□ 0.5
CDK5RAP3-201ENST00000338399 COL24A1Q17RW2 1714 aa18.18■□□□□ 0.5
CDK5RAP3-201ENST00000338399 EZH2Q15910 746 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-201ENST00000338399 BACH2Q9BYV9 841 aa18.18■□□□□ 0.5
CDK5RAP3-201ENST00000338399 TUBGCP6Q96RT7 1819 aa18.18■□□□□ 0.5
CDK5RAP3-201ENST00000338399 LAMB2P55268 1798 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms