RNA–Protein interactions for RNA: ENST00000334409.9

PDCD1-201, Transcript of programmed cell death 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD1, Length 2,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-201ENST00000334409 RIC3Q7Z5B4 369 aa20.65■□□□□ 0.9
PDCD1-201ENST00000334409 ZBTB1Q9Y2K1 713 aa20.65■□□□□ 0.9
PDCD1-201ENST00000334409 A0A0U1RQG5 324 aaPredicted RBP20.65■□□□□ 0.9
PDCD1-201ENST00000334409 BCL11BQ9C0K0 894 aaPredicted RBP20.65■□□□□ 0.9
PDCD1-201ENST00000334409 R3HCC1Q9Y3T6 440 aaKnown RBP20.65■□□□□ 0.9
PDCD1-201ENST00000334409 UQCRHLA0A096LP55 91 aa20.64■□□□□ 0.89
PDCD1-201ENST00000334409 UQCRHP07919 91 aa20.64■□□□□ 0.89
PDCD1-201ENST00000334409 LNPKQ9C0E8 428 aa20.64■□□□□ 0.89
PDCD1-201ENST00000334409 TJP1Q07157 1748 aa20.64■□□□□ 0.89
PDCD1-201ENST00000334409 DMTNQ08495 405 aa20.63■□□□□ 0.89
PDCD1-201ENST00000334409 MEIS3Q99687 375 aa20.63■□□□□ 0.89
PDCD1-201ENST00000334409 KLHL40Q2TBA0 621 aa20.63■□□□□ 0.89
PDCD1-201ENST00000334409 ANKRD13DQ6ZTN6 518 aa20.63■□□□□ 0.89
PDCD1-201ENST00000334409 DDX58O95786 925 aaKnown RBP20.62■□□□□ 0.89
PDCD1-201ENST00000334409 CRKLP46109 303 aaKnown RBP20.62■□□□□ 0.89
PDCD1-201ENST00000334409 CCT4P50991 539 aaKnown RBP20.62■□□□□ 0.89
PDCD1-201ENST00000334409 LINC00116Q8NCU8 138 aa20.62■□□□□ 0.89
PDCD1-201ENST00000334409 ZBTB3Q9H5J0 574 aa20.62■□□□□ 0.89
PDCD1-201ENST00000334409 CWF19L2Q2TBE0 894 aaKnown RBP20.62■□□□□ 0.89
PDCD1-201ENST00000334409 SMIM5Q71RC9 77 aa20.62■□□□□ 0.89
PDCD1-201ENST00000334409 ZNF445P59923 1031 aa20.61■□□□□ 0.89
PDCD1-201ENST00000334409 BEND3Q5T5X7 828 aa20.61■□□□□ 0.89
PDCD1-201ENST00000334409 INTS5Q6P9B9 1019 aaKnown RBP20.61■□□□□ 0.89
PDCD1-201ENST00000334409 CCNL1Q9UK58 526 aaPredicted RBP20.61■□□□□ 0.89
PDCD1-201ENST00000334409 SASS6Q6UVJ0 657 aa20.6■□□□□ 0.89
PDCD1-201ENST00000334409 CCDC94Q9BW85 323 aaPredicted RBP20.6■□□□□ 0.89
PDCD1-201ENST00000334409 SRCIN1Q9C0H9 1055 aa20.6■□□□□ 0.89
PDCD1-201ENST00000334409 MYD88Q99836 296 aa20.6■□□□□ 0.89
PDCD1-201ENST00000334409 CCDC87Q9NVE4 849 aa20.59■□□□□ 0.89
PDCD1-201ENST00000334409 ATP5J2-PTCD1G3V325 749 aa20.59■□□□□ 0.89
PDCD1-201ENST00000334409 PDLIM2Q96JY6 352 aa20.59■□□□□ 0.89
PDCD1-201ENST00000334409 MYH14Q7Z406 1995 aaKnown RBP20.58■□□□□ 0.89
PDCD1-201ENST00000334409 ANKRD45Q5TZF3 282 aa20.58■□□□□ 0.89
PDCD1-201ENST00000334409 TBC1D2BQ9UPU7 963 aa20.58■□□□□ 0.89
PDCD1-201ENST00000334409 PLBD2Q8NHP8 589 aa20.57■□□□□ 0.88
PDCD1-201ENST00000334409 GTPBP4Q9BZE4 634 aaKnown RBP20.57■□□□□ 0.88
PDCD1-201ENST00000334409 IGKV5-2P06315 115 aa20.56■□□□□ 0.88
PDCD1-201ENST00000334409 JARID2Q92833 1246 aaPredicted RBP20.56■□□□□ 0.88
PDCD1-201ENST00000334409 METTL22Q9BUU2 404 aaPredicted RBP20.56■□□□□ 0.88
PDCD1-201ENST00000334409 USP44Q9H0E7 712 aa20.56■□□□□ 0.88
PDCD1-201ENST00000334409 LRRC4BQ9NT99 713 aa20.56■□□□□ 0.88
PDCD1-201ENST00000334409 ZKSCAN5Q9Y2L8 839 aa20.56■□□□□ 0.88
PDCD1-201ENST00000334409 KIF20AO95235 890 aa20.55■□□□□ 0.88
PDCD1-201ENST00000334409 SIRT2Q8IXJ6 389 aa20.55■□□□□ 0.88
PDCD1-201ENST00000334409 APBA3O96018 575 aa20.54■□□□□ 0.88
PDCD1-201ENST00000334409 NBPF7P0C2Y1 421 aaPredicted RBP20.54■□□□□ 0.88
PDCD1-201ENST00000334409 NEXNQ0ZGT2 675 aa20.54■□□□□ 0.88
PDCD1-201ENST00000334409 HLFQ16534 295 aa20.54■□□□□ 0.88
PDCD1-201ENST00000334409 KIF6Q6ZMV9 814 aa20.54■□□□□ 0.88
PDCD1-201ENST00000334409 PXDNLA1KZ92 1463 aa20.53■□□□□ 0.88
PDCD1-201ENST00000334409 IL6STP40189 918 aaPredicted RBP20.53■□□□□ 0.88
PDCD1-201ENST00000334409 DZIP3Q86Y13 1208 aaKnown RBP20.53■□□□□ 0.88
PDCD1-201ENST00000334409 LINS1Q8NG48 757 aa20.53■□□□□ 0.88
PDCD1-201ENST00000334409 EIF5P55010 431 aaKnown RBP20.53■□□□□ 0.88
PDCD1-201ENST00000334409 ARFGEF2Q9Y6D5 1785 aa20.52■□□□□ 0.88
PDCD1-201ENST00000334409 NEURL1BA8MQ27 555 aa20.52■□□□□ 0.88
PDCD1-201ENST00000334409 C9orf78Q9NZ63 289 aaPredicted RBP20.52■□□□□ 0.88
PDCD1-201ENST00000334409 DDX49Q9Y6V7 483 aaKnown RBP20.52■□□□□ 0.88
PDCD1-201ENST00000334409 AMIGO3Q86WK7 504 aa20.51■□□□□ 0.87
PDCD1-201ENST00000334409 PROM2Q8N271 834 aa20.51■□□□□ 0.87
PDCD1-201ENST00000334409 KIF2CQ99661 725 aa20.51■□□□□ 0.87
PDCD1-201ENST00000334409 CCDC39Q9UFE4 941 aa20.51■□□□□ 0.87
PDCD1-201ENST00000334409 LRRFIP2Q9Y608 721 aaKnown RBP20.51■□□□□ 0.87
PDCD1-201ENST00000334409 LY75O60449 1722 aa20.51■□□□□ 0.87
PDCD1-201ENST00000334409 COL5A3P25940 1745 aaPredicted RBP20.51■□□□□ 0.87
PDCD1-201ENST00000334409 GNPATO15228 680 aa20.51■□□□□ 0.87
PDCD1-201ENST00000334409 UBTFL1P0CB47 393 aaPredicted RBP20.51■□□□□ 0.87
PDCD1-201ENST00000334409 TBC1D9Q6ZT07 1266 aa20.51■□□□□ 0.87
PDCD1-201ENST00000334409 ATP10DQ9P241 1426 aa20.51■□□□□ 0.87
PDCD1-201ENST00000334409 MAP3K15Q6ZN16 1313 aa20.5■□□□□ 0.87
PDCD1-201ENST00000334409 ALDH1L1O75891 902 aa20.5■□□□□ 0.87
PDCD1-201ENST00000334409 GPTP24298 496 aa20.5■□□□□ 0.87
PDCD1-201ENST00000334409 LETM1O95202 739 aaPredicted RBP20.49■□□□□ 0.87
PDCD1-201ENST00000334409 GNAI2P04899 355 aa20.49■□□□□ 0.87
PDCD1-201ENST00000334409 GNAI3P08754 354 aa20.49■□□□□ 0.87
PDCD1-201ENST00000334409 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.49■□□□□ 0.87
PDCD1-201ENST00000334409 PHF14O94880 888 aa20.48■□□□□ 0.87
PDCD1-201ENST00000334409 ZSCAN20P17040 1043 aaPredicted RBP20.48■□□□□ 0.87
PDCD1-201ENST00000334409 GCKRQ14397 625 aa20.48■□□□□ 0.87
PDCD1-201ENST00000334409 TXNRD1Q16881 649 aa20.48■□□□□ 0.87
PDCD1-201ENST00000334409 N4BP2Q86UW6 1770 aaPredicted RBP20.48■□□□□ 0.87
PDCD1-201ENST00000334409 NUP188Q5SRE5 1749 aa20.48■□□□□ 0.87
PDCD1-201ENST00000334409 K7ELQ4 463 aaPredicted RBP20.48■□□□□ 0.87
PDCD1-201ENST00000334409 CDC45O75419 566 aa20.48■□□□□ 0.87
PDCD1-201ENST00000334409 CNTNAP4Q9C0A0 1308 aa20.47■□□□□ 0.87
PDCD1-201ENST00000334409 GRM8O00222 908 aa20.47■□□□□ 0.87
PDCD1-201ENST00000334409 PDE4CQ08493 712 aa20.47■□□□□ 0.87
PDCD1-201ENST00000334409 CEP85Q6P2H3 762 aa20.47■□□□□ 0.87
PDCD1-201ENST00000334409 DCTPP1Q9H773 170 aa20.47■□□□□ 0.87
PDCD1-201ENST00000334409 COL15A1P39059 1388 aa20.47■□□□□ 0.87
PDCD1-201ENST00000334409 TCIRG1Q13488 830 aa20.47■□□□□ 0.87
PDCD1-201ENST00000334409 TAF3Q5VWG9 929 aa20.47■□□□□ 0.87
PDCD1-201ENST00000334409 GIGYF2Q6Y7W6 1299 aaKnown RBP20.47■□□□□ 0.87
PDCD1-201ENST00000334409 TAF1LQ8IZX4 1826 aa20.46■□□□□ 0.87
PDCD1-201ENST00000334409 ZNF831Q5JPB2 1677 aa20.46■□□□□ 0.87
PDCD1-201ENST00000334409 AFDNP55196 1824 aaKnown RBP20.46■□□□□ 0.87
PDCD1-201ENST00000334409 A0A087WZG4 1122 aa20.46■□□□□ 0.87
PDCD1-201ENST00000334409 ZHX1Q9UKY1 873 aaPredicted RBP20.46■□□□□ 0.87
PDCD1-201ENST00000334409 CICQ96RK0 1608 aaPredicted RBP20.46■□□□□ 0.87
PDCD1-201ENST00000334409 BAG4O95429 457 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms