RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 ATF5Q9Y2D1 282 aaPredicted RBP23.62■■□□□ 1.37
TSSC4-201ENST00000333256 ALDH1L1O75891 902 aa23.61■■□□□ 1.37
TSSC4-201ENST00000333256 MMP10P09238 476 aa23.61■■□□□ 1.37
TSSC4-201ENST00000333256 TRIM28Q13263 835 aaKnown RBP23.61■■□□□ 1.37
TSSC4-201ENST00000333256 ANKRD36CQ5JPF3 1778 aa23.61■■□□□ 1.37
TSSC4-201ENST00000333256 CASZ1Q86V15 1759 aa23.61■■□□□ 1.37
TSSC4-201ENST00000333256 MVPQ14764 893 aaKnown RBP23.6■■□□□ 1.37
TSSC4-201ENST00000333256 PARP10Q53GL7 1025 aa23.6■■□□□ 1.37
TSSC4-201ENST00000333256 SYNE4Q8N205 404 aa23.6■■□□□ 1.37
TSSC4-201ENST00000333256 CRBNQ96SW2 442 aa23.6■■□□□ 1.37
TSSC4-201ENST00000333256 FAM89AQ96GI7 184 aa23.59■■□□□ 1.37
TSSC4-201ENST00000333256 TRMT112Q9UI30 125 aaKnown RBP23.59■■□□□ 1.37
TSSC4-201ENST00000333256 CARMIL3Q8ND23 1372 aa23.59■■□□□ 1.37
TSSC4-201ENST00000333256 POLRMTO00411 1230 aaKnown RBP23.58■■□□□ 1.37
TSSC4-201ENST00000333256 NBPF7P0C2Y1 421 aaPredicted RBP23.58■■□□□ 1.37
TSSC4-201ENST00000333256 NBPF5PQ86XG9 351 aaPredicted RBP23.58■■□□□ 1.37
TSSC4-201ENST00000333256 NUTM1Q86Y26 1132 aa23.58■■□□□ 1.37
TSSC4-201ENST00000333256 CCDC24Q8N4L8 307 aa23.58■■□□□ 1.37
TSSC4-201ENST00000333256 MEIS3Q99687 375 aa23.58■■□□□ 1.37
TSSC4-201ENST00000333256 USP44Q9H0E7 712 aa23.58■■□□□ 1.37
TSSC4-201ENST00000333256 C9orf78Q9NZ63 289 aaPredicted RBP23.58■■□□□ 1.37
TSSC4-201ENST00000333256 AFDNP55196 1824 aaKnown RBP23.57■■□□□ 1.36
TSSC4-201ENST00000333256 NTSR2O95665 410 aa23.57■■□□□ 1.36
TSSC4-201ENST00000333256 UBE3BQ7Z3V4 1068 aa23.57■■□□□ 1.36
TSSC4-201ENST00000333256 UTP14AQ9BVJ6 771 aaKnown RBP23.57■■□□□ 1.36
TSSC4-201ENST00000333256 MTFR1LQ9H019 292 aa23.57■■□□□ 1.36
TSSC4-201ENST00000333256 GRM8O00222 908 aa23.57■■□□□ 1.36
TSSC4-201ENST00000333256 SERPINB2P05120 415 aa23.57■■□□□ 1.36
TSSC4-201ENST00000333256 PPP1R42Q7Z4L9 355 aa23.57■■□□□ 1.36
TSSC4-201ENST00000333256 NPHP1O15259 732 aa23.56■■□□□ 1.36
TSSC4-201ENST00000333256 DDX19BQ9UMR2 479 aa23.55■■□□□ 1.36
TSSC4-201ENST00000333256 PARP3Q9Y6F1 533 aa23.55■■□□□ 1.36
TSSC4-201ENST00000333256 N4BP2Q86UW6 1770 aaPredicted RBP23.55■■□□□ 1.36
TSSC4-201ENST00000333256 ZBTB7BO15156 539 aaPredicted RBP23.54■■□□□ 1.36
TSSC4-201ENST00000333256 GTF2E1P29083 439 aaPredicted RBP23.54■■□□□ 1.36
TSSC4-201ENST00000333256 ERFEQ4G0M1 354 aa23.54■■□□□ 1.36
TSSC4-201ENST00000333256 ZBTB38Q8NAP3 1195 aaPredicted RBP23.54■■□□□ 1.36
TSSC4-201ENST00000333256 EXOC6Q8TAG9 804 aa23.54■■□□□ 1.36
TSSC4-201ENST00000333256 H7C1W4 665 aa23.54■■□□□ 1.36
TSSC4-201ENST00000333256 PCCAP05165 728 aaPredicted RBP23.54■■□□□ 1.36
TSSC4-201ENST00000333256 TPTE2Q6XPS3 522 aa23.54■■□□□ 1.36
TSSC4-201ENST00000333256 CNBD1Q8NA66 436 aa23.54■■□□□ 1.36
TSSC4-201ENST00000333256 COL24A1Q17RW2 1714 aa23.53■■□□□ 1.36
TSSC4-201ENST00000333256 PRR5LQ6MZQ0 368 aa23.53■■□□□ 1.36
TSSC4-201ENST00000333256 NYXQ9GZU5 481 aa23.53■■□□□ 1.36
TSSC4-201ENST00000333256 SH3TC1Q8TE82 1336 aa23.53■■□□□ 1.36
TSSC4-201ENST00000333256 UBTFL1P0CB47 393 aaPredicted RBP23.52■■□□□ 1.36
TSSC4-201ENST00000333256 CASP7P55210 303 aa23.52■■□□□ 1.36
TSSC4-201ENST00000333256 C1orf115Q9H7X2 142 aa23.52■■□□□ 1.36
TSSC4-201ENST00000333256 ABCC12Q96J65 1359 aa23.52■■□□□ 1.36
TSSC4-201ENST00000333256 HCLS1P14317 486 aaPredicted RBP23.51■■□□□ 1.35
TSSC4-201ENST00000333256 UTYO14607 1347 aa23.51■■□□□ 1.35
TSSC4-201ENST00000333256 IRS4O14654 1257 aaPredicted RBP23.5■■□□□ 1.35
TSSC4-201ENST00000333256 GNAI3P08754 354 aa23.5■■□□□ 1.35
TSSC4-201ENST00000333256 SUCLG2Q96I99 432 aa23.5■■□□□ 1.35
TSSC4-201ENST00000333256 IBTKQ9P2D0 1353 aaPredicted RBP23.5■■□□□ 1.35
TSSC4-201ENST00000333256 NEFLP07196 543 aa23.49■■□□□ 1.35
TSSC4-201ENST00000333256 POLD1P28340 1107 aa23.49■■□□□ 1.35
TSSC4-201ENST00000333256 LRRFIP2Q9Y608 721 aaKnown RBP23.49■■□□□ 1.35
TSSC4-201ENST00000333256 PTGER2P43116 358 aa23.48■■□□□ 1.35
TSSC4-201ENST00000333256 KAZALD1Q96I82 304 aa23.48■■□□□ 1.35
TSSC4-201ENST00000333256 SGIP1Q9BQI5 828 aa23.48■■□□□ 1.35
TSSC4-201ENST00000333256 ZBTB40Q9NUA8 1239 aa23.48■■□□□ 1.35
TSSC4-201ENST00000333256 EPHA10Q5JZY3 1008 aa23.48■■□□□ 1.35
TSSC4-201ENST00000333256 CDHR2Q9BYE9 1310 aa23.47■■□□□ 1.35
TSSC4-201ENST00000333256 ST5P78524 1137 aa23.47■■□□□ 1.35
TSSC4-201ENST00000333256 C3orf67Q6ZVT6 689 aa23.47■■□□□ 1.35
TSSC4-201ENST00000333256 SPON1Q9HCB6 807 aa23.47■■□□□ 1.35
TSSC4-201ENST00000333256 SRCAPQ6ZRS2 3230 aa23.46■■□□□ 1.35
TSSC4-201ENST00000333256 GNAI2P04899 355 aa23.45■■□□□ 1.34
TSSC4-201ENST00000333256 CCDC85AQ96PX6 553 aaPredicted RBP23.45■■□□□ 1.34
TSSC4-201ENST00000333256 BICC1Q9H694 974 aaKnown RBP23.45■■□□□ 1.34
TSSC4-201ENST00000333256 NRXN2Q9P2S2 1712 aa23.44■■□□□ 1.34
TSSC4-201ENST00000333256 FOXO4P98177 505 aa23.44■■□□□ 1.34
TSSC4-201ENST00000333256 SLC10A5Q5PT55 438 aa23.44■■□□□ 1.34
TSSC4-201ENST00000333256 PDE8AO60658 829 aa23.43■■□□□ 1.34
TSSC4-201ENST00000333256 CHMP4BQ9H444 224 aaKnown RBP23.43■■□□□ 1.34
TSSC4-201ENST00000333256 ANKRD44Q8N8A2 993 aa23.42■■□□□ 1.34
TSSC4-201ENST00000333256 PPP1R1BQ9UD71 204 aaPredicted RBP23.42■■□□□ 1.34
TSSC4-201ENST00000333256 CTSWP56202 376 aa23.41■■□□□ 1.34
TSSC4-201ENST00000333256 LMBR1LQ6UX01 489 aa23.41■■□□□ 1.34
TSSC4-201ENST00000333256 KLHL34Q8N239 644 aa23.41■■□□□ 1.34
TSSC4-201ENST00000333256 PLA2G12BQ9BX93 195 aa23.41■■□□□ 1.34
TSSC4-201ENST00000333256 DDX60Q8IY21 1712 aaKnown RBP23.41■■□□□ 1.34
TSSC4-201ENST00000333256 TNRC6CQ9HCJ0 1690 aaKnown RBP23.41■■□□□ 1.34
TSSC4-201ENST00000333256 NLRP3Q96P20 1036 aa23.41■■□□□ 1.34
TSSC4-201ENST00000333256 BRIP1Q9BX63 1249 aa23.41■■□□□ 1.34
TSSC4-201ENST00000333256 CHMP3Q9Y3E7 222 aa23.41■■□□□ 1.34
TSSC4-201ENST00000333256 TTLL11Q8NHH1 800 aa23.4■■□□□ 1.34
TSSC4-201ENST00000333256 HDAC5Q9UQL6 1122 aa23.39■■□□□ 1.34
TSSC4-201ENST00000333256 C10orf71Q711Q0 1435 aa23.39■■□□□ 1.33
TSSC4-201ENST00000333256 HSP90B1P14625 803 aaKnown RBP23.38■■□□□ 1.33
TSSC4-201ENST00000333256 PCDHB15Q9Y5E8 787 aa23.38■■□□□ 1.33
TSSC4-201ENST00000333256 FAM161AQ3B820 660 aa23.38■■□□□ 1.33
TSSC4-201ENST00000333256 RABL6Q3YEC7 729 aaPredicted RBP23.38■■□□□ 1.33
TSSC4-201ENST00000333256 CEP85Q6P2H3 762 aa23.38■■□□□ 1.33
TSSC4-201ENST00000333256 GREM2Q9H772 168 aa23.38■■□□□ 1.33
TSSC4-201ENST00000333256 PNMA6EA0A0J9YXQ4 647 aa23.37■■□□□ 1.33
TSSC4-201ENST00000333256 CSF1RP07333 972 aa23.37■■□□□ 1.33
TSSC4-201ENST00000333256 ANKRD31Q8N7Z5 1873 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms