RNA–Protein interactions for RNA: ENST00000333149.6

TRIM50-201, Transcript of tripartite motif containing 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM50, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-201ENST00000333149 SLIT3O75094 1523 aa21.47■■□□□ 1.03
TRIM50-201ENST00000333149 GRM8O00222 908 aa21.46■■□□□ 1.03
TRIM50-201ENST00000333149 SASH1O94885 1247 aa21.46■■□□□ 1.03
TRIM50-201ENST00000333149 LARP6Q9BRS8 491 aaKnown RBP21.46■■□□□ 1.03
TRIM50-201ENST00000333149 PA2G4Q9UQ80 394 aaKnown RBP21.46■■□□□ 1.03
TRIM50-201ENST00000333149 ZKSCAN1P17029 563 aaPredicted RBP21.46■■□□□ 1.03
TRIM50-201ENST00000333149 ST3GAL1Q11201 340 aa21.46■■□□□ 1.03
TRIM50-201ENST00000333149 CCDC83Q8IWF9 413 aa21.46■■□□□ 1.03
TRIM50-201ENST00000333149 ALDH8A1Q9H2A2 487 aaPredicted RBP21.46■■□□□ 1.03
TRIM50-201ENST00000333149 CWF19L2Q2TBE0 894 aaKnown RBP21.45■■□□□ 1.02
TRIM50-201ENST00000333149 AACSQ86V21 672 aa21.45■■□□□ 1.02
TRIM50-201ENST00000333149 DDX21Q9NR30 783 aaKnown RBP eCLIP21.45■■□□□ 1.02
TRIM50-201ENST00000333149 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.45■■□□□ 1.02
TRIM50-201ENST00000333149 CREB3L3Q68CJ9 461 aa21.45■■□□□ 1.02
TRIM50-201ENST00000333149 RBM8AQ9Y5S9 174 aaKnown RBP21.45■■□□□ 1.02
TRIM50-201ENST00000333149 DDX58O95786 925 aaKnown RBP21.44■■□□□ 1.02
TRIM50-201ENST00000333149 GCP02774 474 aa21.44■■□□□ 1.02
TRIM50-201ENST00000333149 ME3Q16798 604 aa21.44■■□□□ 1.02
TRIM50-201ENST00000333149 EAF2Q96CJ1 260 aaPredicted RBP21.44■■□□□ 1.02
TRIM50-201ENST00000333149 SUCLG2Q96I99 432 aa21.44■■□□□ 1.02
TRIM50-201ENST00000333149 PTMAP06454 111 aaKnown RBP21.43■■□□□ 1.02
TRIM50-201ENST00000333149 PSMA5P28066 241 aa21.43■■□□□ 1.02
TRIM50-201ENST00000333149 KIAA2012Q0VF49 1180 aa21.43■■□□□ 1.02
TRIM50-201ENST00000333149 G3BP1Q13283 466 aaKnown RBP eCLIP21.43■■□□□ 1.02
TRIM50-201ENST00000333149 SLAIN2Q9P270 581 aa21.43■■□□□ 1.02
TRIM50-201ENST00000333149 FIBPO43427 364 aa21.42■■□□□ 1.02
TRIM50-201ENST00000333149 DNM1Q05193 864 aaKnown RBP21.42■■□□□ 1.02
TRIM50-201ENST00000333149 PDIA6Q15084 440 aa21.42■■□□□ 1.02
TRIM50-201ENST00000333149 JCADQ9P266 1359 aa21.42■■□□□ 1.02
TRIM50-201ENST00000333149 NMIQ13287 307 aaPredicted RBP21.41■■□□□ 1.02
TRIM50-201ENST00000333149 TSGA10IPQ3SY00 556 aa21.41■■□□□ 1.02
TRIM50-201ENST00000333149 SASS6Q6UVJ0 657 aa21.41■■□□□ 1.02
TRIM50-201ENST00000333149 BICC1Q9H694 974 aaKnown RBP21.41■■□□□ 1.02
TRIM50-201ENST00000333149 MRC1P22897 1456 aa21.41■■□□□ 1.02
TRIM50-201ENST00000333149 KDM4AO75164 1064 aa21.41■■□□□ 1.02
TRIM50-201ENST00000333149 HCLS1P14317 486 aaPredicted RBP21.41■■□□□ 1.02
TRIM50-201ENST00000333149 DDX17Q92841 729 aaKnown RBP21.41■■□□□ 1.02
TRIM50-201ENST00000333149 FAM227BQ96M60 508 aa21.41■■□□□ 1.02
TRIM50-201ENST00000333149 USP25Q9UHP3 1055 aa21.41■■□□□ 1.02
TRIM50-201ENST00000333149 TPCN1Q9ULQ1 816 aa21.41■■□□□ 1.02
TRIM50-201ENST00000333149 PRAMEF22A3QJZ6 481 aa21.4■■□□□ 1.02
TRIM50-201ENST00000333149 SLC27A2O14975 620 aa21.4■■□□□ 1.02
TRIM50-201ENST00000333149 ADCY5O95622 1261 aa21.4■■□□□ 1.02
TRIM50-201ENST00000333149 ANKRD24Q8TF21 1146 aa21.4■■□□□ 1.02
TRIM50-201ENST00000333149 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.4■■□□□ 1.02
TRIM50-201ENST00000333149 NPHP3Q7Z494 1330 aa21.4■■□□□ 1.02
TRIM50-201ENST00000333149 MED23Q9ULK4 1368 aa21.4■■□□□ 1.02
TRIM50-201ENST00000333149 DYNC1I1O14576 645 aa21.39■■□□□ 1.02
TRIM50-201ENST00000333149 ANKRD1Q15327 319 aa21.39■■□□□ 1.02
TRIM50-201ENST00000333149 BRINP3Q76B58 766 aa21.39■■□□□ 1.02
TRIM50-201ENST00000333149 MAP7D2Q96T17 732 aa21.39■■□□□ 1.02
TRIM50-201ENST00000333149 TRPM3Q9HCF6 1732 aaPredicted RBP21.39■■□□□ 1.02
TRIM50-201ENST00000333149 ELP1O95163 1332 aa21.39■■□□□ 1.02
TRIM50-201ENST00000333149 UQCRHLA0A096LP55 91 aa21.39■■□□□ 1.01
TRIM50-201ENST00000333149 UQCRHP07919 91 aa21.39■■□□□ 1.01
TRIM50-201ENST00000333149 PIBF1Q8WXW3 757 aa21.39■■□□□ 1.01
TRIM50-201ENST00000333149 IGKV5-2P06315 115 aa21.38■■□□□ 1.01
TRIM50-201ENST00000333149 PDCP20941 246 aa21.38■■□□□ 1.01
TRIM50-201ENST00000333149 RNF20Q5VTR2 975 aa21.38■■□□□ 1.01
TRIM50-201ENST00000333149 LMOD2Q6P5Q4 547 aa21.38■■□□□ 1.01
TRIM50-201ENST00000333149 LARP1Q6PKG0 1096 aaKnown RBP21.38■■□□□ 1.01
TRIM50-201ENST00000333149 ZBTB7CA1YPR0 619 aa21.38■■□□□ 1.01
TRIM50-201ENST00000333149 CCDC8Q9H0W5 538 aaPredicted RBP21.37■■□□□ 1.01
TRIM50-201ENST00000333149 HMG20BQ9P0W2 317 aa21.37■■□□□ 1.01
TRIM50-201ENST00000333149 LARP1BQ659C4 914 aaKnown RBP21.36■■□□□ 1.01
TRIM50-201ENST00000333149 NECAB1Q8N987 351 aa21.36■■□□□ 1.01
TRIM50-201ENST00000333149 A0A0D9SFI3 127 aa21.36■■□□□ 1.01
TRIM50-201ENST00000333149 RPS6KB1P23443 525 aa21.36■■□□□ 1.01
TRIM50-201ENST00000333149 KCNJ4P48050 445 aa21.36■■□□□ 1.01
TRIM50-201ENST00000333149 USPL1Q5W0Q7 1092 aa21.36■■□□□ 1.01
TRIM50-201ENST00000333149 GIMAP6Q6P9H5 292 aa21.36■■□□□ 1.01
TRIM50-201ENST00000333149 BLOC1S2Q6QNY1 142 aa21.36■■□□□ 1.01
TRIM50-201ENST00000333149 KRT85P78386 507 aa21.35■■□□□ 1.01
TRIM50-201ENST00000333149 TLR7Q9NYK1 1049 aaKnown RBP21.35■■□□□ 1.01
TRIM50-201ENST00000333149 VPS37CA5D8V6 355 aaPredicted RBP21.34■■□□□ 1.01
TRIM50-201ENST00000333149 NEURL1BA8MQ27 555 aa21.34■■□□□ 1.01
TRIM50-201ENST00000333149 AEBP2Q6ZN18 517 aaPredicted RBP21.34■■□□□ 1.01
TRIM50-201ENST00000333149 TTC6Q86TZ1 520 aa21.34■■□□□ 1.01
TRIM50-201ENST00000333149 FSD1Q9BTV5 496 aa21.34■■□□□ 1.01
TRIM50-201ENST00000333149 BOLA2Q9H3K6 86 aa21.34■■□□□ 1.01
TRIM50-201ENST00000333149 COPRSQ9NQ92 184 aa21.34■■□□□ 1.01
TRIM50-201ENST00000333149 SPTLC3Q9NUV7 552 aa21.34■■□□□ 1.01
TRIM50-201ENST00000333149 AXIN2Q9Y2T1 843 aa21.34■■□□□ 1.01
TRIM50-201ENST00000333149 LTBP4Q8N2S1 1624 aa21.34■■□□□ 1.01
TRIM50-201ENST00000333149 COL15A1P39059 1388 aa21.33■■□□□ 1.01
TRIM50-201ENST00000333149 TOB2Q14106 344 aaPredicted RBP21.33■■□□□ 1.01
TRIM50-201ENST00000333149 GCKRQ14397 625 aa21.33■■□□□ 1.01
TRIM50-201ENST00000333149 NOLC1Q14978 699 aaKnown RBP eCLIP21.33■■□□□ 1.01
TRIM50-201ENST00000333149 ZNF790Q6PG37 636 aa21.33■■□□□ 1.01
TRIM50-201ENST00000333149 RIC3Q7Z5B4 369 aa21.33■■□□□ 1.01
TRIM50-201ENST00000333149 CCDC192P0DO97 292 aa21.33■■□□□ 1
TRIM50-201ENST00000333149 NEXNQ0ZGT2 675 aa21.33■■□□□ 1
TRIM50-201ENST00000333149 MTERF4Q7Z6M4 381 aaKnown RBP21.33■■□□□ 1
TRIM50-201ENST00000333149 METTL22Q9BUU2 404 aaPredicted RBP21.33■■□□□ 1
TRIM50-201ENST00000333149 RFX7Q2KHR2 1363 aa21.32■■□□□ 1
TRIM50-201ENST00000333149 TAF5LO75529 589 aa21.32■■□□□ 1
TRIM50-201ENST00000333149 TPM3P06753 285 aa21.32■■□□□ 1
TRIM50-201ENST00000333149 ATP5JP18859 108 aa21.32■■□□□ 1
TRIM50-201ENST00000333149 AIMP1Q12904 312 aaKnown RBP21.32■■□□□ 1
TRIM50-201ENST00000333149 COL9A3Q14050 684 aaPredicted RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms