RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 CUL4AQ13619 759 aa21.06■□□□□ 0.96
DDX28-201ENST00000332395 RFX5P48382 616 aaPredicted RBP21.05■□□□□ 0.96
DDX28-201ENST00000332395 FSD2A1L4K1 749 aa21.04■□□□□ 0.96
DDX28-201ENST00000332395 GOLGA6L3A6NEY3 463 aa21.04■□□□□ 0.96
DDX28-201ENST00000332395 SNX14Q9Y5W7 946 aa21.04■□□□□ 0.96
DDX28-201ENST00000332395 TNS2Q63HR2 1409 aa21.04■□□□□ 0.96
DDX28-201ENST00000332395 CASP7P55210 303 aa21.04■□□□□ 0.96
DDX28-201ENST00000332395 PTPN12Q05209 780 aaKnown RBP21.04■□□□□ 0.96
DDX28-201ENST00000332395 NOL8Q76FK4 1167 aaKnown RBP21.04■□□□□ 0.96
DDX28-201ENST00000332395 NUP188Q5SRE5 1749 aa21.04■□□□□ 0.96
DDX28-201ENST00000332395 TTLL7Q6ZT98 887 aa21.03■□□□□ 0.96
DDX28-201ENST00000332395 A1BGP04217 495 aa21.03■□□□□ 0.96
DDX28-201ENST00000332395 ZDHHC9Q9Y397 364 aa21.03■□□□□ 0.96
DDX28-201ENST00000332395 TOGARAM1Q9Y4F4 1720 aa21.02■□□□□ 0.96
DDX28-201ENST00000332395 RASEFQ8IZ41 740 aa21.02■□□□□ 0.96
DDX28-201ENST00000332395 INTS4Q96HW7 963 aaKnown RBP21.02■□□□□ 0.96
DDX28-201ENST00000332395 BOLA2Q9H3K6 86 aa21.01■□□□□ 0.95
DDX28-201ENST00000332395 HIP1O00291 1037 aa21■□□□□ 0.95
DDX28-201ENST00000332395 H7C1W4 665 aa21■□□□□ 0.95
DDX28-201ENST00000332395 PTH1RQ03431 593 aa21■□□□□ 0.95
DDX28-201ENST00000332395 MCTP1Q6DN14 999 aa21■□□□□ 0.95
DDX28-201ENST00000332395 ARXQ96QS3 562 aa21■□□□□ 0.95
DDX28-201ENST00000332395 CWC25Q9NXE8 425 aaPredicted RBP20.99■□□□□ 0.95
DDX28-201ENST00000332395 TFCP2Q12800 502 aa20.99■□□□□ 0.95
DDX28-201ENST00000332395 TNNI3KQ59H18 835 aa20.99■□□□□ 0.95
DDX28-201ENST00000332395 LMBR1LQ6UX01 489 aa20.99■□□□□ 0.95
DDX28-201ENST00000332395 TMOD3Q9NYL9 352 aa20.99■□□□□ 0.95
DDX28-201ENST00000332395 FPGT-TNNI3KV9GXZ4 949 aa20.99■□□□□ 0.95
DDX28-201ENST00000332395 TJP1Q07157 1748 aa20.98■□□□□ 0.95
DDX28-201ENST00000332395 FOXO4P98177 505 aa20.98■□□□□ 0.95
DDX28-201ENST00000332395 FAM227BQ96M60 508 aa20.98■□□□□ 0.95
DDX28-201ENST00000332395 TTC14Q96N46 770 aa20.98■□□□□ 0.95
DDX28-201ENST00000332395 DBNLQ9UJU6 430 aaKnown RBP20.98■□□□□ 0.95
DDX28-201ENST00000332395 NMIQ13287 307 aaPredicted RBP20.97■□□□□ 0.95
DDX28-201ENST00000332395 FSD1Q9BTV5 496 aa20.97■□□□□ 0.95
DDX28-201ENST00000332395 ZBTB3Q9H5J0 574 aa20.97■□□□□ 0.95
DDX28-201ENST00000332395 BTG4Q9NY30 223 aa20.97■□□□□ 0.95
DDX28-201ENST00000332395 CCDC171Q6TFL3 1326 aa20.97■□□□□ 0.95
DDX28-201ENST00000332395 KLHL40Q2TBA0 621 aa20.97■□□□□ 0.95
DDX28-201ENST00000332395 XRCC6P12956 609 aaKnown RBP eCLIP20.96■□□□□ 0.95
DDX28-201ENST00000332395 DDX49Q9Y6V7 483 aaKnown RBP20.96■□□□□ 0.95
DDX28-201ENST00000332395 PRPF40BQ6NWY9 871 aaKnown RBP20.96■□□□□ 0.95
DDX28-201ENST00000332395 CCDC191Q8NCU4 936 aa20.96■□□□□ 0.95
DDX28-201ENST00000332395 SNRKQ9NRH2 765 aa20.96■□□□□ 0.95
DDX28-201ENST00000332395 ISY1Q9ULR0 285 aaKnown RBP20.96■□□□□ 0.95
DDX28-201ENST00000332395 ATP5JP18859 108 aa20.95■□□□□ 0.94
DDX28-201ENST00000332395 KCNB2Q92953 911 aa20.95■□□□□ 0.94
DDX28-201ENST00000332395 LMBRD1Q9NUN5 540 aa20.95■□□□□ 0.94
DDX28-201ENST00000332395 CHMP3Q9Y3E7 222 aa20.95■□□□□ 0.94
DDX28-201ENST00000332395 BRD1O95696 1058 aa20.95■□□□□ 0.94
DDX28-201ENST00000332395 CASTP20810 708 aaKnown RBP20.95■□□□□ 0.94
DDX28-201ENST00000332395 AK2P54819 239 aa20.95■□□□□ 0.94
DDX28-201ENST00000332395 NECTIN1Q15223 517 aa20.95■□□□□ 0.94
DDX28-201ENST00000332395 A0A0D9SFI3 127 aa20.94■□□□□ 0.94
DDX28-201ENST00000332395 RRAGDQ9NQL2 400 aaPredicted RBP20.94■□□□□ 0.94
DDX28-201ENST00000332395 MRE11P49959 708 aa20.93■□□□□ 0.94
DDX28-201ENST00000332395 PIGBQ92521 554 aa20.93■□□□□ 0.94
DDX28-201ENST00000332395 MAP4K1Q92918 833 aa20.93■□□□□ 0.94
DDX28-201ENST00000332395 RBM8AQ9Y5S9 174 aaKnown RBP20.93■□□□□ 0.94
DDX28-201ENST00000332395 MED23Q9ULK4 1368 aa20.92■□□□□ 0.94
DDX28-201ENST00000332395 ADCK5Q3MIX3 580 aa20.92■□□□□ 0.94
DDX28-201ENST00000332395 FOXD4L5Q5VV16 416 aaPredicted RBP20.92■□□□□ 0.94
DDX28-201ENST00000332395 RUFY3Q7L099 469 aa20.92■□□□□ 0.94
DDX28-201ENST00000332395 FOXD4L4Q8WXT5 416 aaPredicted RBP20.92■□□□□ 0.94
DDX28-201ENST00000332395 EDC3Q96F86 508 aaKnown RBP20.92■□□□□ 0.94
DDX28-201ENST00000332395 JAKMIP1Q96N16 626 aaKnown RBP20.92■□□□□ 0.94
DDX28-201ENST00000332395 DBNDD2Q9BQY9 259 aa20.92■□□□□ 0.94
DDX28-201ENST00000332395 TM6SF1Q9BZW5 370 aa20.92■□□□□ 0.94
DDX28-201ENST00000332395 ASAP1Q9ULH1 1129 aa20.92■□□□□ 0.94
DDX28-201ENST00000332395 LIMCH1Q9UPQ0 1083 aa20.92■□□□□ 0.94
DDX28-201ENST00000332395 COL14A1Q05707 1796 aaKnown RBP20.92■□□□□ 0.94
DDX28-201ENST00000332395 CPA1P15085 419 aa20.92■□□□□ 0.94
DDX28-201ENST00000332395 ZKSCAN1P17029 563 aaPredicted RBP20.91■□□□□ 0.94
DDX28-201ENST00000332395 KCNJ4P48050 445 aa20.91■□□□□ 0.94
DDX28-201ENST00000332395 VSIG10Q8N0Z9 540 aa20.91■□□□□ 0.94
DDX28-201ENST00000332395 GRPEL1Q9HAV7 217 aa20.91■□□□□ 0.94
DDX28-201ENST00000332395 ZSWIM6Q9HCJ5 1215 aa20.91■□□□□ 0.94
DDX28-201ENST00000332395 DISP2A7MBM2 1401 aa20.91■□□□□ 0.94
DDX28-201ENST00000332395 CREB3L3Q68CJ9 461 aa20.9■□□□□ 0.94
DDX28-201ENST00000332395 ATG9AQ7Z3C6 839 aa20.9■□□□□ 0.94
DDX28-201ENST00000332395 TEX13AQ9BXU3 409 aaPredicted RBP20.9■□□□□ 0.94
DDX28-201ENST00000332395 ITGB4P16144 1822 aa20.9■□□□□ 0.94
DDX28-201ENST00000332395 VPS53Q5VIR6 699 aa20.9■□□□□ 0.94
DDX28-201ENST00000332395 DNAJC10Q8IXB1 793 aa20.9■□□□□ 0.94
DDX28-201ENST00000332395 ISCA1Q9BUE6 129 aa20.9■□□□□ 0.94
DDX28-201ENST00000332395 ZNF330Q9Y3S2 320 aaPredicted RBP20.9■□□□□ 0.94
DDX28-201ENST00000332395 PRPF40AO75400 957 aaKnown RBP20.89■□□□□ 0.94
DDX28-201ENST00000332395 GAS2L3Q86XJ1 694 aa20.89■□□□□ 0.94
DDX28-201ENST00000332395 CHAMP1Q96JM3 812 aa20.89■□□□□ 0.94
DDX28-201ENST00000332395 ATG3Q9NT62 314 aa20.89■□□□□ 0.94
DDX28-201ENST00000332395 CYP46A1Q9Y6A2 500 aa20.89■□□□□ 0.94
DDX28-201ENST00000332395 TCIRG1Q13488 830 aa20.89■□□□□ 0.93
DDX28-201ENST00000332395 LARP6Q9BRS8 491 aaKnown RBP20.89■□□□□ 0.93
DDX28-201ENST00000332395 PANK2Q9BZ23 570 aa20.89■□□□□ 0.93
DDX28-201ENST00000332395 PDRG1Q9NUG6 133 aa20.89■□□□□ 0.93
DDX28-201ENST00000332395 RFX7Q2KHR2 1363 aa20.88■□□□□ 0.93
DDX28-201ENST00000332395 JCADQ9P266 1359 aa20.88■□□□□ 0.93
DDX28-201ENST00000332395 IL15P40933 162 aaPredicted RBP20.88■□□□□ 0.93
DDX28-201ENST00000332395 ZNF589Q86UQ0 364 aaPredicted RBP20.88■□□□□ 0.93
DDX28-201ENST00000332395 HAUS7Q99871 368 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms