RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 VWDEQ8N2E2 1590 aa11.27□□□□□ -0.61
SS18L1-201ENST00000331758 SLC5A1P13866 664 aa11.27□□□□□ -0.61
SS18L1-201ENST00000331758 PRIM1P49642 420 aaKnown RBP11.27□□□□□ -0.61
SS18L1-201ENST00000331758 TIMM10P62072 90 aa11.27□□□□□ -0.61
SS18L1-201ENST00000331758 VPS53Q5VIR6 699 aa11.27□□□□□ -0.61
SS18L1-201ENST00000331758 AXIN2Q9Y2T1 843 aa11.27□□□□□ -0.61
SS18L1-201ENST00000331758 ZNF335Q9H4Z2 1342 aaPredicted RBP11.27□□□□□ -0.61
SS18L1-201ENST00000331758 CPSF1Q10570 1443 aaKnown RBP11.27□□□□□ -0.61
SS18L1-201ENST00000331758 ADGRB1O14514 1584 aa11.27□□□□□ -0.61
SS18L1-201ENST00000331758 BRPF1P55201 1214 aaPredicted RBP11.27□□□□□ -0.61
SS18L1-201ENST00000331758 GCKRQ14397 625 aa11.27□□□□□ -0.61
SS18L1-201ENST00000331758 HELBQ8NG08 1087 aaPredicted RBP11.27□□□□□ -0.61
SS18L1-201ENST00000331758 ATP2B3Q16720 1220 aa11.26□□□□□ -0.61
SS18L1-201ENST00000331758 NIP7Q9Y221 180 aaKnown RBP eCLIP11.26□□□□□ -0.61
SS18L1-201ENST00000331758 TTC41PQ6P2S7 1318 aa11.26□□□□□ -0.61
SS18L1-201ENST00000331758 MINDY4BA8MYZ0 360 aa11.26□□□□□ -0.61
SS18L1-201ENST00000331758 MAP3K12Q12852 859 aa11.26□□□□□ -0.61
SS18L1-201ENST00000331758 NMIQ13287 307 aaPredicted RBP11.26□□□□□ -0.61
SS18L1-201ENST00000331758 STK38Q15208 465 aa11.26□□□□□ -0.61
SS18L1-201ENST00000331758 IQSEC3Q9UPP2 1182 aaPredicted RBP11.26□□□□□ -0.61
SS18L1-201ENST00000331758 ADAMTS13Q76LX8 1427 aa11.26□□□□□ -0.61
SS18L1-201ENST00000331758 CAVIN4Q5BKX8 364 aa11.26□□□□□ -0.61
SS18L1-201ENST00000331758 NAPBQ9H115 298 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 SH2B1Q9NRF2 756 aaPredicted RBP11.25□□□□□ -0.61
SS18L1-201ENST00000331758 IQGAP1P46940 1657 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 ANKARQ7Z5J8 1434 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 GSPT1P15170 499 aaKnown RBP11.25□□□□□ -0.61
SS18L1-201ENST00000331758 CCT2P78371 535 aaKnown RBP11.25□□□□□ -0.61
SS18L1-201ENST00000331758 BEND3Q5T5X7 828 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 SIRT2Q8IXJ6 389 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 NECAB1Q8N987 351 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 SNX21Q969T3 373 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 LRRC2Q9BYS8 371 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 CCDC69A6NI79 296 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 IRS4O14654 1257 aaPredicted RBP11.25□□□□□ -0.61
SS18L1-201ENST00000331758 ZNF213O14771 459 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 ME1P48163 572 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 SAMD1Q6SPF0 538 aaPredicted RBP11.25□□□□□ -0.61
SS18L1-201ENST00000331758 ZNF594Q96JF6 807 aaPredicted RBP11.25□□□□□ -0.61
SS18L1-201ENST00000331758 GRPEL1Q9HAV7 217 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 KINO60870 393 aaKnown RBP11.24□□□□□ -0.61
SS18L1-201ENST00000331758 BAG4O95429 457 aaKnown RBP11.24□□□□□ -0.61
SS18L1-201ENST00000331758 GUCY1B3Q02153 619 aa11.24□□□□□ -0.61
SS18L1-201ENST00000331758 UBAC1Q9BSL1 405 aa11.24□□□□□ -0.61
SS18L1-201ENST00000331758 RBM25P49756 843 aaKnown RBP11.24□□□□□ -0.61
SS18L1-201ENST00000331758 SSH3Q8TE77 659 aa11.24□□□□□ -0.61
SS18L1-201ENST00000331758 SPATA32Q96LK8 384 aa11.24□□□□□ -0.61
SS18L1-201ENST00000331758 NEK1Q96PY6 1258 aa11.24□□□□□ -0.61
SS18L1-201ENST00000331758 CDC5LQ99459 802 aaKnown RBP11.24□□□□□ -0.61
SS18L1-201ENST00000331758 DBNDD2Q9BQY9 259 aa11.24□□□□□ -0.61
SS18L1-201ENST00000331758 ANKIB1Q9P2G1 1089 aa11.24□□□□□ -0.61
SS18L1-201ENST00000331758 KIF24Q5T7B8 1368 aa11.24□□□□□ -0.61
SS18L1-201ENST00000331758 PES1O00541 588 aaKnown RBP11.24□□□□□ -0.61
SS18L1-201ENST00000331758 SLC3A2P08195 630 aaKnown RBP11.24□□□□□ -0.61
SS18L1-201ENST00000331758 XBP1P17861 261 aa11.24□□□□□ -0.61
SS18L1-201ENST00000331758 MPNDQ8N594 471 aa11.24□□□□□ -0.61
SS18L1-201ENST00000331758 NEURL1BA8MQ27 555 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 ANAPC15P60006 121 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 TTLL7Q6ZT98 887 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 CCDC82Q8N4S0 544 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 ZGPATQ8N5A5 531 aaKnown RBP11.23□□□□□ -0.61
SS18L1-201ENST00000331758 ZNF396Q96N95 335 aaPredicted RBP11.23□□□□□ -0.61
SS18L1-201ENST00000331758 TSPY26PQ9H489 355 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 NDUFB9Q9Y6M9 179 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 DEPDC5O75140 1603 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 CPA1P15085 419 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 TRIM22Q8IYM9 498 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 SYCE3A1L190 88 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 TPD52L1Q16890 204 aaPredicted RBP11.23□□□□□ -0.61
SS18L1-201ENST00000331758 RAB11FIP4Q86YS3 637 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 MED14O60244 1454 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 POLR1AO95602 1720 aaPredicted RBP11.23□□□□□ -0.61
SS18L1-201ENST00000331758 GJB2P29033 226 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 CCDC152Q4G0S7 254 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 BRINP3Q76B58 766 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 NBPF5PQ86XG9 351 aaPredicted RBP11.23□□□□□ -0.61
SS18L1-201ENST00000331758 SMARCC1Q92922 1105 aaPredicted RBP11.23□□□□□ -0.61
SS18L1-201ENST00000331758 BRF1Q92994 677 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 AK7Q96M32 723 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 PAG1Q9NWQ8 432 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 PREX1Q8TCU6 1659 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 MROH2AA6NES4 1674 aa11.22□□□□□ -0.61
SS18L1-201ENST00000331758 CCDC191Q8NCU4 936 aa11.22□□□□□ -0.61
SS18L1-201ENST00000331758 KIAA1210Q9ULL0 1709 aa11.22□□□□□ -0.61
SS18L1-201ENST00000331758 LRRC7Q96NW7 1537 aa11.22□□□□□ -0.61
SS18L1-201ENST00000331758 ADGRL3Q9HAR2 1447 aa11.22□□□□□ -0.61
SS18L1-201ENST00000331758 MCMDC2Q4G0Z9 681 aa11.22□□□□□ -0.61
SS18L1-201ENST00000331758 CPS1P31327 1500 aa11.22□□□□□ -0.61
SS18L1-201ENST00000331758 ERVV-2B6SEH9 535 aa11.22□□□□□ -0.61
SS18L1-201ENST00000331758 RFC4P35249 363 aa11.22□□□□□ -0.61
SS18L1-201ENST00000331758 PIBF1Q8WXW3 757 aa11.22□□□□□ -0.61
SS18L1-201ENST00000331758 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.22□□□□□ -0.61
SS18L1-201ENST00000331758 TFIP11Q9UBB9 837 aaKnown RBP11.22□□□□□ -0.61
SS18L1-201ENST00000331758 MROH1Q8NDA8 1641 aa11.22□□□□□ -0.61
SS18L1-201ENST00000331758 STX6O43752 255 aa11.21□□□□□ -0.61
SS18L1-201ENST00000331758 HMGB1P09429 215 aaKnown RBP11.21□□□□□ -0.61
SS18L1-201ENST00000331758 HCLS1P14317 486 aaPredicted RBP11.21□□□□□ -0.61
SS18L1-201ENST00000331758 EYA2O00167 538 aa11.21□□□□□ -0.61
SS18L1-201ENST00000331758 FAM98CQ17RN3 349 aaKnown RBP11.21□□□□□ -0.61
SS18L1-201ENST00000331758 BRMS1Q9HCU9 246 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms