RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 KDM3BQ7LBC6 1761 aa20.79■□□□□ 0.92
PTP4A3-201ENST00000329397 AP5Z1O43299 807 aa20.78■□□□□ 0.92
PTP4A3-201ENST00000329397 SLC39A6Q13433 755 aa20.78■□□□□ 0.92
PTP4A3-201ENST00000329397 C1orf141Q5JVX7 400 aa20.78■□□□□ 0.92
PTP4A3-201ENST00000329397 RUFY2Q8WXA3 655 aa20.78■□□□□ 0.92
PTP4A3-201ENST00000329397 EPB41L2O43491 1005 aaKnown RBP20.78■□□□□ 0.92
PTP4A3-201ENST00000329397 STK3Q13188 491 aa20.78■□□□□ 0.92
PTP4A3-201ENST00000329397 CREB3L3Q68CJ9 461 aa20.78■□□□□ 0.92
PTP4A3-201ENST00000329397 NECTIN1Q15223 517 aa20.77■□□□□ 0.92
PTP4A3-201ENST00000329397 KSR2Q6VAB6 950 aa20.77■□□□□ 0.92
PTP4A3-201ENST00000329397 CDC37L1Q7L3B6 337 aa20.77■□□□□ 0.92
PTP4A3-201ENST00000329397 PDCL3Q9H2J4 239 aa20.77■□□□□ 0.92
PTP4A3-201ENST00000329397 ZSWIM6Q9HCJ5 1215 aa20.77■□□□□ 0.92
PTP4A3-201ENST00000329397 USP42Q9H9J4 1324 aaKnown RBP20.77■□□□□ 0.92
PTP4A3-201ENST00000329397 MYL6BP14649 208 aa20.77■□□□□ 0.92
PTP4A3-201ENST00000329397 MCM5P33992 734 aa20.77■□□□□ 0.92
PTP4A3-201ENST00000329397 CAMK4Q16566 473 aa20.77■□□□□ 0.92
PTP4A3-201ENST00000329397 VPS53Q5VIR6 699 aa20.77■□□□□ 0.92
PTP4A3-201ENST00000329397 MED1Q15648 1581 aaPredicted RBP20.77■□□□□ 0.91
PTP4A3-201ENST00000329397 FAM177BA6PVY3 158 aa20.76■□□□□ 0.91
PTP4A3-201ENST00000329397 PLEKHO1Q53GL0 409 aaPredicted RBP20.76■□□□□ 0.91
PTP4A3-201ENST00000329397 MTX1Q13505 466 aa20.76■□□□□ 0.91
PTP4A3-201ENST00000329397 CSPP1Q1MSJ5 1256 aa20.76■□□□□ 0.91
PTP4A3-201ENST00000329397 HOXB7P09629 217 aa20.75■□□□□ 0.91
PTP4A3-201ENST00000329397 SPC24Q8NBT2 197 aa20.75■□□□□ 0.91
PTP4A3-201ENST00000329397 GPATCH3Q96I76 525 aa20.75■□□□□ 0.91
PTP4A3-201ENST00000329397 CCDC9Q9Y3X0 531 aaKnown RBP20.75■□□□□ 0.91
PTP4A3-201ENST00000329397 CRYBG1Q9Y4K1 1723 aa20.75■□□□□ 0.91
PTP4A3-201ENST00000329397 GRM8O00222 908 aa20.75■□□□□ 0.91
PTP4A3-201ENST00000329397 ZNF589Q86UQ0 364 aaPredicted RBP20.75■□□□□ 0.91
PTP4A3-201ENST00000329397 EVI5LQ96CN4 794 aa20.75■□□□□ 0.91
PTP4A3-201ENST00000329397 ORAI2Q96SN7 254 aa20.75■□□□□ 0.91
PTP4A3-201ENST00000329397 FSD1Q9BTV5 496 aa20.75■□□□□ 0.91
PTP4A3-201ENST00000329397 ZKSCAN1P17029 563 aaPredicted RBP20.74■□□□□ 0.91
PTP4A3-201ENST00000329397 NFAT5O94916 1531 aa20.74■□□□□ 0.91
PTP4A3-201ENST00000329397 LARP1BQ659C4 914 aaKnown RBP20.74■□□□□ 0.91
PTP4A3-201ENST00000329397 TTC6Q86TZ1 520 aa20.74■□□□□ 0.91
PTP4A3-201ENST00000329397 AXIN2Q9Y2T1 843 aa20.74■□□□□ 0.91
PTP4A3-201ENST00000329397 SLC27A2O14975 620 aa20.74■□□□□ 0.91
PTP4A3-201ENST00000329397 G3BP1Q13283 466 aaKnown RBP eCLIP20.74■□□□□ 0.91
PTP4A3-201ENST00000329397 FAM184AQ8NB25 1140 aa20.74■□□□□ 0.91
PTP4A3-201ENST00000329397 TFIP11Q9UBB9 837 aaKnown RBP20.74■□□□□ 0.91
PTP4A3-201ENST00000329397 ATP6V1DQ9Y5K8 247 aa20.73■□□□□ 0.91
PTP4A3-201ENST00000329397 SASS6Q6UVJ0 657 aa20.73■□□□□ 0.91
PTP4A3-201ENST00000329397 FUCA2Q9BTY2 467 aa20.73■□□□□ 0.91
PTP4A3-201ENST00000329397 GCP02774 474 aa20.72■□□□□ 0.91
PTP4A3-201ENST00000329397 LIG1P18858 919 aa20.72■□□□□ 0.91
PTP4A3-201ENST00000329397 TERF1P54274 439 aa20.72■□□□□ 0.91
PTP4A3-201ENST00000329397 EPHA10Q5JZY3 1008 aa20.72■□□□□ 0.91
PTP4A3-201ENST00000329397 ANKRD24Q8TF21 1146 aa20.72■□□□□ 0.91
PTP4A3-201ENST00000329397 KDM4AO75164 1064 aa20.72■□□□□ 0.91
PTP4A3-201ENST00000329397 ALDH1L1O75891 902 aa20.71■□□□□ 0.91
PTP4A3-201ENST00000329397 IGKV5-2P06315 115 aa20.71■□□□□ 0.91
PTP4A3-201ENST00000329397 RIC3Q7Z5B4 369 aa20.71■□□□□ 0.91
PTP4A3-201ENST00000329397 CKAP2LQ8IYA6 745 aa20.71■□□□□ 0.91
PTP4A3-201ENST00000329397 MAP4K1Q92918 833 aa20.71■□□□□ 0.91
PTP4A3-201ENST00000329397 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.7■□□□□ 0.9
PTP4A3-201ENST00000329397 NOLC1Q14978 699 aaKnown RBP eCLIP20.7■□□□□ 0.9
PTP4A3-201ENST00000329397 ERC1Q8IUD2 1116 aa20.7■□□□□ 0.9
PTP4A3-201ENST00000329397 LINS1Q8NG48 757 aa20.7■□□□□ 0.9
PTP4A3-201ENST00000329397 SH2B1Q9NRF2 756 aaPredicted RBP20.7■□□□□ 0.9
PTP4A3-201ENST00000329397 UVSSAQ2YD98 709 aa20.7■□□□□ 0.9
PTP4A3-201ENST00000329397 LARP1Q6PKG0 1096 aaKnown RBP20.69■□□□□ 0.9
PTP4A3-201ENST00000329397 CCDC129Q6ZRS4 1044 aa20.69■□□□□ 0.9
PTP4A3-201ENST00000329397 ZSCAN31Q96LW9 406 aaPredicted RBP20.69■□□□□ 0.9
PTP4A3-201ENST00000329397 PPFIA3O75145 1194 aa20.68■□□□□ 0.9
PTP4A3-201ENST00000329397 TRHP20396 242 aaPredicted RBP20.68■□□□□ 0.9
PTP4A3-201ENST00000329397 PDIA6Q15084 440 aa20.68■□□□□ 0.9
PTP4A3-201ENST00000329397 BLOC1S2Q6QNY1 142 aa20.68■□□□□ 0.9
PTP4A3-201ENST00000329397 PIBF1Q8WXW3 757 aa20.68■□□□□ 0.9
PTP4A3-201ENST00000329397 TM6SF1Q9BZW5 370 aa20.68■□□□□ 0.9
PTP4A3-201ENST00000329397 FOSBP53539 338 aa20.68■□□□□ 0.9
PTP4A3-201ENST00000329397 BBXQ8WY36 941 aaPredicted RBP20.68■□□□□ 0.9
PTP4A3-201ENST00000329397 DDX11Q96FC9 970 aa20.68■□□□□ 0.9
PTP4A3-201ENST00000329397 LMO7Q8WWI1 1683 aa20.68■□□□□ 0.9
PTP4A3-201ENST00000329397 FER1L4A9Z1Z3 1794 aa20.68■□□□□ 0.9
PTP4A3-201ENST00000329397 JAK2O60674 1132 aa20.68■□□□□ 0.9
PTP4A3-201ENST00000329397 ZC3H6P61129 1189 aaKnown RBP20.68■□□□□ 0.9
PTP4A3-201ENST00000329397 KCNH5Q8NCM2 988 aa20.68■□□□□ 0.9
PTP4A3-201ENST00000329397 SEC62Q99442 399 aaKnown RBP20.68■□□□□ 0.9
PTP4A3-201ENST00000329397 MYD88Q99836 296 aa20.68■□□□□ 0.9
PTP4A3-201ENST00000329397 LRRC2Q9BYS8 371 aa20.68■□□□□ 0.9
PTP4A3-201ENST00000329397 PYCARDQ9ULZ3 195 aa20.68■□□□□ 0.9
PTP4A3-201ENST00000329397 TOB2Q14106 344 aaPredicted RBP20.67■□□□□ 0.9
PTP4A3-201ENST00000329397 KCNB2Q92953 911 aa20.67■□□□□ 0.9
PTP4A3-201ENST00000329397 LETM1O95202 739 aaPredicted RBP20.67■□□□□ 0.9
PTP4A3-201ENST00000329397 SLFNL1Q499Z3 407 aa20.67■□□□□ 0.9
PTP4A3-201ENST00000329397 LUZP1Q86V48 1076 aa20.67■□□□□ 0.9
PTP4A3-201ENST00000329397 ARHGEF25Q86VW2 580 aa20.67■□□□□ 0.9
PTP4A3-201ENST00000329397 KCNF1Q9H3M0 494 aa20.67■□□□□ 0.9
PTP4A3-201ENST00000329397 NPHP4O75161 1426 aaPredicted RBP20.67■□□□□ 0.9
PTP4A3-201ENST00000329397 USP54Q70EL1 1684 aa20.66■□□□□ 0.9
PTP4A3-201ENST00000329397 AMOTQ4VCS5 1084 aa20.66■□□□□ 0.9
PTP4A3-201ENST00000329397 XAGE3Q8WTP9 111 aa20.66■□□□□ 0.9
PTP4A3-201ENST00000329397 KRT85P78386 507 aa20.66■□□□□ 0.9
PTP4A3-201ENST00000329397 COPS6Q7L5N1 327 aa20.65■□□□□ 0.9
PTP4A3-201ENST00000329397 DDX21Q9NR30 783 aaKnown RBP eCLIP20.65■□□□□ 0.9
PTP4A3-201ENST00000329397 DACT1Q9NYF0 836 aa20.65■□□□□ 0.9
PTP4A3-201ENST00000329397 COL15A1P39059 1388 aa20.65■□□□□ 0.9
PTP4A3-201ENST00000329397 DYNC1I1O14576 645 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms