RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 TTC5Q8N0Z6 440 aa16.8■□□□□ 0.28
ATP2C1-201ENST00000328560 CABLES1Q8TDN4 633 aa16.8■□□□□ 0.28
ATP2C1-201ENST00000328560 CCDC39Q9UFE4 941 aa16.8■□□□□ 0.28
ATP2C1-201ENST00000328560 ATP6V1DQ9Y5K8 247 aa16.8■□□□□ 0.28
ATP2C1-201ENST00000328560 ATP5J2-PTCD1G3V325 749 aa16.8■□□□□ 0.28
ATP2C1-201ENST00000328560 PTCD1O75127 700 aaKnown RBP16.8■□□□□ 0.28
ATP2C1-201ENST00000328560 EPHA10Q5JZY3 1008 aa16.8■□□□□ 0.28
ATP2C1-201ENST00000328560 LARP1Q6PKG0 1096 aaKnown RBP16.8■□□□□ 0.28
ATP2C1-201ENST00000328560 IL17RAQ96F46 866 aa16.8■□□□□ 0.28
ATP2C1-201ENST00000328560 LTN1O94822 1766 aa16.8■□□□□ 0.28
ATP2C1-201ENST00000328560 OFD1O75665 1012 aa16.8■□□□□ 0.28
ATP2C1-201ENST00000328560 VPS53Q5VIR6 699 aa16.8■□□□□ 0.28
ATP2C1-201ENST00000328560 GIMAP6Q6P9H5 292 aa16.8■□□□□ 0.28
ATP2C1-201ENST00000328560 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.8■□□□□ 0.28
ATP2C1-201ENST00000328560 ZKSCAN5Q9Y2L8 839 aa16.8■□□□□ 0.28
ATP2C1-201ENST00000328560 USP42Q9H9J4 1324 aaKnown RBP16.8■□□□□ 0.28
ATP2C1-201ENST00000328560 CCDC183Q5T5S1 534 aa16.79■□□□□ 0.28
ATP2C1-201ENST00000328560 ZNF830Q96NB3 372 aaPredicted RBP16.79■□□□□ 0.28
ATP2C1-201ENST00000328560 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.79■□□□□ 0.28
ATP2C1-201ENST00000328560 CHRNA2Q15822 529 aa16.79■□□□□ 0.28
ATP2C1-201ENST00000328560 LARP1BQ659C4 914 aaKnown RBP16.79■□□□□ 0.28
ATP2C1-201ENST00000328560 ZNF496Q96IT1 587 aaPredicted RBP16.79■□□□□ 0.28
ATP2C1-201ENST00000328560 ZSWIM6Q9HCJ5 1215 aa16.79■□□□□ 0.28
ATP2C1-201ENST00000328560 TAF6LQ9Y6J9 622 aa16.79■□□□□ 0.28
ATP2C1-201ENST00000328560 NECTIN1Q15223 517 aa16.79■□□□□ 0.28
ATP2C1-201ENST00000328560 DNAJC2Q99543 621 aaKnown RBP16.79■□□□□ 0.28
ATP2C1-201ENST00000328560 TPCN1Q9ULQ1 816 aa16.79■□□□□ 0.28
ATP2C1-201ENST00000328560 USP16Q9Y5T5 823 aa16.79■□□□□ 0.28
ATP2C1-201ENST00000328560 NFAT5O94916 1531 aa16.79■□□□□ 0.28
ATP2C1-201ENST00000328560 UBE2HP62256 183 aa16.78■□□□□ 0.28
ATP2C1-201ENST00000328560 PDIA6Q15084 440 aa16.78■□□□□ 0.28
ATP2C1-201ENST00000328560 SLC27A2O14975 620 aa16.78■□□□□ 0.28
ATP2C1-201ENST00000328560 HS1BP3Q53T59 392 aa16.78■□□□□ 0.28
ATP2C1-201ENST00000328560 BLOC1S2Q6QNY1 142 aa16.78■□□□□ 0.28
ATP2C1-201ENST00000328560 UBE3BQ7Z3V4 1068 aa16.78■□□□□ 0.28
ATP2C1-201ENST00000328560 MTMR6Q9Y217 621 aa16.78■□□□□ 0.28
ATP2C1-201ENST00000328560 MARF1Q9Y4F3 1742 aaKnown RBP16.78■□□□□ 0.28
ATP2C1-201ENST00000328560 ZSCAN31Q96LW9 406 aaPredicted RBP16.78■□□□□ 0.28
ATP2C1-201ENST00000328560 NEURL1BA8MQ27 555 aa16.77■□□□□ 0.28
ATP2C1-201ENST00000328560 CHGBP05060 677 aa16.77■□□□□ 0.27
ATP2C1-201ENST00000328560 RBM10P98175 930 aaKnown RBP16.77■□□□□ 0.27
ATP2C1-201ENST00000328560 GCKRQ14397 625 aa16.77■□□□□ 0.27
ATP2C1-201ENST00000328560 SH2B1Q9NRF2 756 aaPredicted RBP16.77■□□□□ 0.27
ATP2C1-201ENST00000328560 RGPD2P0DJD1 1756 aa16.76■□□□□ 0.27
ATP2C1-201ENST00000328560 DNTTIP2Q5QJE6 756 aaKnown RBP16.76■□□□□ 0.27
ATP2C1-201ENST00000328560 ANKRD13DQ6ZTN6 518 aa16.76■□□□□ 0.27
ATP2C1-201ENST00000328560 ZNF589Q86UQ0 364 aaPredicted RBP16.76■□□□□ 0.27
ATP2C1-201ENST00000328560 HIP1O00291 1037 aa16.76■□□□□ 0.27
ATP2C1-201ENST00000328560 RNF20Q5VTR2 975 aa16.76■□□□□ 0.27
ATP2C1-201ENST00000328560 SLC52A2Q9HAB3 445 aa16.76■□□□□ 0.27
ATP2C1-201ENST00000328560 PODXL2Q9NZ53 605 aa16.76■□□□□ 0.27
ATP2C1-201ENST00000328560 PSMA5P28066 241 aa16.76■□□□□ 0.27
ATP2C1-201ENST00000328560 MAP4K1Q92918 833 aa16.76■□□□□ 0.27
ATP2C1-201ENST00000328560 ERBB3P21860 1342 aa16.76■□□□□ 0.27
ATP2C1-201ENST00000328560 ST3GAL1Q11201 340 aa16.75■□□□□ 0.27
ATP2C1-201ENST00000328560 TFIP11Q9UBB9 837 aaKnown RBP16.75■□□□□ 0.27
ATP2C1-201ENST00000328560 TCHHQ07283 1943 aa16.75■□□□□ 0.27
ATP2C1-201ENST00000328560 TPM2P07951 284 aa16.75■□□□□ 0.27
ATP2C1-201ENST00000328560 TFCP2Q12800 502 aa16.75■□□□□ 0.27
ATP2C1-201ENST00000328560 CCDC129Q6ZRS4 1044 aa16.75■□□□□ 0.27
ATP2C1-201ENST00000328560 PKNOX2Q96KN3 472 aa16.75■□□□□ 0.27
ATP2C1-201ENST00000328560 TM6SF1Q9BZW5 370 aa16.75■□□□□ 0.27
ATP2C1-201ENST00000328560 NPHP3Q7Z494 1330 aa16.74■□□□□ 0.27
ATP2C1-201ENST00000328560 TUBGCP6Q96RT7 1819 aa16.74■□□□□ 0.27
ATP2C1-201ENST00000328560 ADCY5O95622 1261 aa16.74■□□□□ 0.27
ATP2C1-201ENST00000328560 FGD1P98174 961 aa16.74■□□□□ 0.27
ATP2C1-201ENST00000328560 CAMK4Q16566 473 aa16.74■□□□□ 0.27
ATP2C1-201ENST00000328560 CDC37L1Q7L3B6 337 aa16.74■□□□□ 0.27
ATP2C1-201ENST00000328560 IFNL2Q8IZJ0 200 aa16.74■□□□□ 0.27
ATP2C1-201ENST00000328560 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.74■□□□□ 0.27
ATP2C1-201ENST00000328560 A0A087WZG4 1122 aa16.73■□□□□ 0.27
ATP2C1-201ENST00000328560 HSP90B1P14625 803 aaKnown RBP16.73■□□□□ 0.27
ATP2C1-201ENST00000328560 FOSBP53539 338 aa16.73■□□□□ 0.27
ATP2C1-201ENST00000328560 METTL22Q9BUU2 404 aaPredicted RBP16.73■□□□□ 0.27
ATP2C1-201ENST00000328560 GOLGA6L4A6NEF3 574 aa16.73■□□□□ 0.27
ATP2C1-201ENST00000328560 CSPP1Q1MSJ5 1256 aa16.73■□□□□ 0.27
ATP2C1-201ENST00000328560 CADPS2Q86UW7 1296 aa16.73■□□□□ 0.27
ATP2C1-201ENST00000328560 TMEM87AQ8NBN3 555 aa16.73■□□□□ 0.27
ATP2C1-201ENST00000328560 NEUROD6Q96NK8 337 aa16.73■□□□□ 0.27
ATP2C1-201ENST00000328560 PHKG2P15735 406 aa16.73■□□□□ 0.27
ATP2C1-201ENST00000328560 DDX46Q7L014 1031 aaKnown RBP16.73■□□□□ 0.27
ATP2C1-201ENST00000328560 SEC62Q99442 399 aaKnown RBP16.73■□□□□ 0.27
ATP2C1-201ENST00000328560 ZNF500O60304 480 aaPredicted RBP16.72■□□□□ 0.27
ATP2C1-201ENST00000328560 LRRC2Q9BYS8 371 aa16.72■□□□□ 0.27
ATP2C1-201ENST00000328560 TTC12Q9H892 705 aaPredicted RBP16.72■□□□□ 0.27
ATP2C1-201ENST00000328560 DBNLQ9UJU6 430 aaKnown RBP16.72■□□□□ 0.27
ATP2C1-201ENST00000328560 NAP1L2Q9ULW6 460 aaPredicted RBP16.72■□□□□ 0.27
ATP2C1-201ENST00000328560 MED1Q15648 1581 aaPredicted RBP16.72■□□□□ 0.27
ATP2C1-201ENST00000328560 FAM184AQ8NB25 1140 aa16.72■□□□□ 0.27
ATP2C1-201ENST00000328560 DBNDD2Q9BQY9 259 aa16.72■□□□□ 0.27
ATP2C1-201ENST00000328560 FAM13BQ9NYF5 915 aa16.72■□□□□ 0.27
ATP2C1-201ENST00000328560 HEG1Q9ULI3 1381 aa16.72■□□□□ 0.27
ATP2C1-201ENST00000328560 NCAPD2Q15021 1401 aa16.71■□□□□ 0.27
ATP2C1-201ENST00000328560 SNRPA1P09661 255 aaKnown RBP16.71■□□□□ 0.27
ATP2C1-201ENST00000328560 CABP4P57796 275 aa16.71■□□□□ 0.27
ATP2C1-201ENST00000328560 ARID3AQ99856 593 aa16.71■□□□□ 0.27
ATP2C1-201ENST00000328560 PPFIA3O75145 1194 aa16.71■□□□□ 0.27
ATP2C1-201ENST00000328560 KRT85P78386 507 aa16.71■□□□□ 0.27
ATP2C1-201ENST00000328560 C17orf53Q8N3J3 647 aaPredicted RBP16.71■□□□□ 0.27
ATP2C1-201ENST00000328560 DDX11Q96FC9 970 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms