RNA–Protein interactions for RNA: ENST00000328024.10

RAB11B-201, Transcript of RAB11B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11B, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-201ENST00000328024 UTP14AQ9BVJ6 771 aaKnown RBP25.69■■□□□ 1.7
RAB11B-201ENST00000328024 IBTKQ9P2D0 1353 aaPredicted RBP25.68■■□□□ 1.7
RAB11B-201ENST00000328024 CWF19L2Q2TBE0 894 aaKnown RBP25.68■■□□□ 1.7
RAB11B-201ENST00000328024 NYXQ9GZU5 481 aa25.68■■□□□ 1.7
RAB11B-201ENST00000328024 NOB1Q9ULX3 412 aaKnown RBP25.68■■□□□ 1.7
RAB11B-201ENST00000328024 NPHP1O15259 732 aa25.67■■□□□ 1.7
RAB11B-201ENST00000328024 DPEP1P16444 411 aa25.67■■□□□ 1.7
RAB11B-201ENST00000328024 KCNA3P22001 575 aa25.67■■□□□ 1.7
RAB11B-201ENST00000328024 CHRNA5P30532 468 aa25.67■■□□□ 1.7
RAB11B-201ENST00000328024 BRIP1Q9BX63 1249 aa25.67■■□□□ 1.7
RAB11B-201ENST00000328024 N4BP2Q86UW6 1770 aaPredicted RBP25.67■■□□□ 1.7
RAB11B-201ENST00000328024 TGFB2P61812 414 aa25.67■■□□□ 1.7
RAB11B-201ENST00000328024 ST5P78524 1137 aa25.67■■□□□ 1.7
RAB11B-201ENST00000328024 NEURL1BA8MQ27 555 aa25.66■■□□□ 1.7
RAB11B-201ENST00000328024 TRMT112Q9UI30 125 aaKnown RBP25.66■■□□□ 1.7
RAB11B-201ENST00000328024 PTPRCP08575 1304 aa25.66■■□□□ 1.7
RAB11B-201ENST00000328024 GTF2E1P29083 439 aaPredicted RBP25.65■■□□□ 1.7
RAB11B-201ENST00000328024 BEND3Q5T5X7 828 aa25.65■■□□□ 1.7
RAB11B-201ENST00000328024 CCDC191Q8NCU4 936 aa25.65■■□□□ 1.7
RAB11B-201ENST00000328024 FAM89AQ96GI7 184 aa25.65■■□□□ 1.7
RAB11B-201ENST00000328024 GOLGB1Q14789 3259 aaKnown RBP25.65■■□□□ 1.7
RAB11B-201ENST00000328024 JARID2Q92833 1246 aaPredicted RBP25.64■■□□□ 1.7
RAB11B-201ENST00000328024 WWC3Q9ULE0 1092 aa25.64■■□□□ 1.7
RAB11B-201ENST00000328024 NEXNQ0ZGT2 675 aa25.64■■□□□ 1.69
RAB11B-201ENST00000328024 RTL5Q5HYW3 569 aaPredicted RBP25.64■■□□□ 1.69
RAB11B-201ENST00000328024 C3orf67Q6ZVT6 689 aa25.64■■□□□ 1.69
RAB11B-201ENST00000328024 CWC25Q9NXE8 425 aaPredicted RBP25.64■■□□□ 1.69
RAB11B-201ENST00000328024 TNRC6CQ9HCJ0 1690 aaKnown RBP25.63■■□□□ 1.69
RAB11B-201ENST00000328024 SLC10A5Q5PT55 438 aa25.63■■□□□ 1.69
RAB11B-201ENST00000328024 LINS1Q8NG48 757 aa25.63■■□□□ 1.69
RAB11B-201ENST00000328024 SLC4A10Q6U841 1118 aa25.62■■□□□ 1.69
RAB11B-201ENST00000328024 C2CD5Q86YS7 1000 aa25.62■■□□□ 1.69
RAB11B-201ENST00000328024 SH3TC1Q8TE82 1336 aa25.62■■□□□ 1.69
RAB11B-201ENST00000328024 KLRG2A4D1S0 409 aaPredicted RBP25.61■■□□□ 1.69
RAB11B-201ENST00000328024 HCLS1P14317 486 aaPredicted RBP25.61■■□□□ 1.69
RAB11B-201ENST00000328024 PDE6BP35913 854 aa25.61■■□□□ 1.69
RAB11B-201ENST00000328024 TNNQ9UQP3 1299 aa25.61■■□□□ 1.69
RAB11B-201ENST00000328024 COL11A2P13942 1736 aaPredicted RBP25.61■■□□□ 1.69
RAB11B-201ENST00000328024 RNF123Q5XPI4 1314 aa25.6■■□□□ 1.69
RAB11B-201ENST00000328024 GCKRQ14397 625 aa25.6■■□□□ 1.69
RAB11B-201ENST00000328024 ZBTB38Q8NAP3 1195 aaPredicted RBP25.6■■□□□ 1.69
RAB11B-201ENST00000328024 PCCAP05165 728 aaPredicted RBP25.59■■□□□ 1.69
RAB11B-201ENST00000328024 SRGNP10124 158 aa25.59■■□□□ 1.69
RAB11B-201ENST00000328024 SUPT16HQ9Y5B9 1047 aaKnown RBP25.59■■□□□ 1.69
RAB11B-201ENST00000328024 KIF16BQ96L93 1317 aa25.58■■□□□ 1.69
RAB11B-201ENST00000328024 RIC1Q4ADV7 1423 aa25.58■■□□□ 1.69
RAB11B-201ENST00000328024 H0YIN7 160 aa25.58■■□□□ 1.69
RAB11B-201ENST00000328024 FRAT1Q92837 279 aaPredicted RBP25.58■■□□□ 1.69
RAB11B-201ENST00000328024 BRCA1P38398 1863 aaKnown RBP25.58■■□□□ 1.68
RAB11B-201ENST00000328024 H7C1W4 665 aa25.57■■□□□ 1.68
RAB11B-201ENST00000328024 ARHGAP45Q92619 1136 aa25.57■■□□□ 1.68
RAB11B-201ENST00000328024 DDX60Q8IY21 1712 aaKnown RBP25.57■■□□□ 1.68
RAB11B-201ENST00000328024 CRY2Q49AN0 593 aa25.56■■□□□ 1.68
RAB11B-201ENST00000328024 DLEC1Q9Y238 1755 aa25.56■■□□□ 1.68
RAB11B-201ENST00000328024 IRS4O14654 1257 aaPredicted RBP25.56■■□□□ 1.68
RAB11B-201ENST00000328024 YBX3P16989 372 aaKnown RBP eCLIP25.56■■□□□ 1.689e-8■■■■□ 22.6
RAB11B-201ENST00000328024 CASP7P55210 303 aa25.56■■□□□ 1.68
RAB11B-201ENST00000328024 API5Q9BZZ5 524 aaKnown RBP25.56■■□□□ 1.68
RAB11B-201ENST00000328024 SRCIN1Q9C0H9 1055 aa25.56■■□□□ 1.68
RAB11B-201ENST00000328024 RCAN3Q9UKA8 241 aa25.56■■□□□ 1.68
RAB11B-201ENST00000328024 UTRNP46939 3433 aa25.55■■□□□ 1.68
RAB11B-201ENST00000328024 TRIM27P14373 513 aa25.55■■□□□ 1.68
RAB11B-201ENST00000328024 PIM2Q9P1W9 311 aa25.55■■□□□ 1.68
RAB11B-201ENST00000328024 ZNF622Q969S3 477 aaKnown RBP eCLIP25.54■■□□□ 1.689e-10■□□□□ 8.5
RAB11B-201ENST00000328024 NLRP3Q96P20 1036 aa25.54■■□□□ 1.68
RAB11B-201ENST00000328024 ALDH1L1O75891 902 aa25.54■■□□□ 1.68
RAB11B-201ENST00000328024 UBE3BQ7Z3V4 1068 aa25.54■■□□□ 1.68
RAB11B-201ENST00000328024 PDZRN3Q9UPQ7 1066 aa25.54■■□□□ 1.68
RAB11B-201ENST00000328024 LAMB2P55268 1798 aa25.54■■□□□ 1.68
RAB11B-201ENST00000328024 ATF7IPQ6VMQ6 1270 aa25.53■■□□□ 1.68
RAB11B-201ENST00000328024 MASTLQ96GX5 879 aa25.53■■□□□ 1.68
RAB11B-201ENST00000328024 CDHR2Q9BYE9 1310 aa25.53■■□□□ 1.68
RAB11B-201ENST00000328024 IPO8O15397 1037 aaKnown RBP25.51■■□□□ 1.67
RAB11B-201ENST00000328024 NPR1P16066 1061 aa25.51■■□□□ 1.67
RAB11B-201ENST00000328024 ZKSCAN2Q63HK3 967 aa25.51■■□□□ 1.67
RAB11B-201ENST00000328024 STYK1Q6J9G0 422 aa25.51■■□□□ 1.67
RAB11B-201ENST00000328024 BCS1LQ9Y276 419 aa25.51■■□□□ 1.67
RAB11B-201ENST00000328024 ABCC4O15439 1325 aa25.51■■□□□ 1.67
RAB11B-201ENST00000328024 CLUAP1Q96AJ1 413 aa25.51■■□□□ 1.67
RAB11B-201ENST00000328024 GPR162Q16538 588 aa25.5■■□□□ 1.67
RAB11B-201ENST00000328024 GRM8O00222 908 aa25.49■■□□□ 1.67
RAB11B-201ENST00000328024 HOXA10P31260 410 aaPredicted RBP25.49■■□□□ 1.67
RAB11B-201ENST00000328024 SF3B3Q15393 1217 aaKnown RBP25.49■■□□□ 1.67
RAB11B-201ENST00000328024 DALRD3Q5D0E6 543 aaKnown RBP25.49■■□□□ 1.67
RAB11B-201ENST00000328024 TTLL6Q8N841 843 aa25.49■■□□□ 1.67
RAB11B-201ENST00000328024 PDE8AO60658 829 aa25.49■■□□□ 1.67
RAB11B-201ENST00000328024 NBPF7P0C2Y1 421 aaPredicted RBP25.49■■□□□ 1.67
RAB11B-201ENST00000328024 NEFLP07196 543 aa25.48■■□□□ 1.67
RAB11B-201ENST00000328024 USP44Q9H0E7 712 aa25.48■■□□□ 1.67
RAB11B-201ENST00000328024 SLX4Q8IY92 1834 aa25.47■■□□□ 1.67
RAB11B-201ENST00000328024 CCT4P50991 539 aaKnown RBP25.47■■□□□ 1.67
RAB11B-201ENST00000328024 INTS3Q68E01 1043 aaKnown RBP25.47■■□□□ 1.67
RAB11B-201ENST00000328024 RPGRQ92834 1020 aaKnown RBP25.47■■□□□ 1.67
RAB11B-201ENST00000328024 C9orf78Q9NZ63 289 aaPredicted RBP25.47■■□□□ 1.67
RAB11B-201ENST00000328024 SLC51AQ86UW1 340 aa25.46■■□□□ 1.67
RAB11B-201ENST00000328024 CNKSR1Q969H4 720 aa25.46■■□□□ 1.67
RAB11B-201ENST00000328024 UTYO14607 1347 aa25.46■■□□□ 1.67
RAB11B-201ENST00000328024 COL4A1P02462 1669 aa25.46■■□□□ 1.67
RAB11B-201ENST00000328024 PLIN1O60240 522 aa25.46■■□□□ 1.67
RAB11B-201ENST00000328024 RLBP1P12271 317 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 164.5 ms