RNA–Protein interactions for RNA: ENST00000323418.10

ME3-201, Transcript of malic enzyme 3, humanhuman

TSL 5 BASIC

Gene ME3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-201ENST00000323418 C3orf67Q6ZVT6 689 aa27.75■■■□□ 2.03
ME3-201ENST00000323418 DDNO94850 711 aaPredicted RBP27.74■■■□□ 2.03
ME3-201ENST00000323418 PARP10Q53GL7 1025 aa27.74■■■□□ 2.03
ME3-201ENST00000323418 NECTIN2Q92692 538 aa27.74■■■□□ 2.03
ME3-201ENST00000323418 COPS6Q7L5N1 327 aa27.73■■■□□ 2.03
ME3-201ENST00000323418 SLC51AQ86UW1 340 aa27.73■■■□□ 2.03
ME3-201ENST00000323418 RTKN2Q8IZC4 609 aa27.73■■■□□ 2.03
ME3-201ENST00000323418 DDX21Q9NR30 783 aaKnown RBP eCLIP27.73■■■□□ 2.03
ME3-201ENST00000323418 ZNF277Q9NRM2 450 aaPredicted RBP27.73■■■□□ 2.03
ME3-201ENST00000323418 ADAMTSL1Q8N6G6 1762 aa27.73■■■□□ 2.03
ME3-201ENST00000323418 XAGE3Q8WTP9 111 aa27.72■■■□□ 2.03
ME3-201ENST00000323418 TAF1P21675 1872 aa27.72■■■□□ 2.03
ME3-201ENST00000323418 PPP1R42Q7Z4L9 355 aa27.71■■■□□ 2.03
ME3-201ENST00000323418 ZNF541Q9H0D2 1346 aa27.7■■■□□ 2.03
ME3-201ENST00000323418 SLC10A5Q5PT55 438 aa27.7■■■□□ 2.02
ME3-201ENST00000323418 L3MBTL3Q96JM7 780 aaPredicted RBP27.7■■■□□ 2.02
ME3-201ENST00000323418 CFAP44Q96MT7 982 aa27.7■■■□□ 2.02
ME3-201ENST00000323418 CRAMP1Q96RY5 1269 aa27.7■■■□□ 2.02
ME3-201ENST00000323418 PSMD1Q99460 953 aa27.7■■■□□ 2.02
ME3-201ENST00000323418 LAS1LQ9Y4W2 734 aaKnown RBP27.7■■■□□ 2.02
ME3-201ENST00000323418 HOXB7P09629 217 aa27.69■■■□□ 2.02
ME3-201ENST00000323418 ZNF853P0CG23 659 aa27.69■■■□□ 2.02
ME3-201ENST00000323418 SYNE4Q8N205 404 aa27.69■■■□□ 2.02
ME3-201ENST00000323418 RPGRQ92834 1020 aaKnown RBP27.69■■■□□ 2.02
ME3-201ENST00000323418 CHPF2Q9P2E5 772 aa27.69■■■□□ 2.02
ME3-201ENST00000323418 RNF123Q5XPI4 1314 aa27.68■■■□□ 2.02
ME3-201ENST00000323418 IARSP41252 1262 aaKnown RBP27.68■■■□□ 2.02
ME3-201ENST00000323418 NLRP10Q86W26 655 aa27.68■■■□□ 2.02
ME3-201ENST00000323418 POTEIP0CG38 1075 aa27.67■■■□□ 2.02
ME3-201ENST00000323418 POTEJP0CG39 1038 aa27.67■■■□□ 2.02
ME3-201ENST00000323418 AIMP1Q12904 312 aaKnown RBP27.67■■■□□ 2.02
ME3-201ENST00000323418 CC2D2BQ6DHV5 1058 aa27.67■■■□□ 2.02
ME3-201ENST00000323418 KLRG1Q96E93 195 aa27.67■■■□□ 2.02
ME3-201ENST00000323418 UTP14AQ9BVJ6 771 aaKnown RBP27.67■■■□□ 2.02
ME3-201ENST00000323418 FZD9O00144 591 aa27.66■■■□□ 2.02
ME3-201ENST00000323418 HSP90AB3PQ58FF7 597 aa27.66■■■□□ 2.02
ME3-201ENST00000323418 MBIPQ9NS73 344 aa27.66■■■□□ 2.02
ME3-201ENST00000323418 LRRC37AA6NMS7 1700 aa27.66■■■□□ 2.02
ME3-201ENST00000323418 LTBP1Q14766 1721 aa27.66■■■□□ 2.02
ME3-201ENST00000323418 APAF1O14727 1248 aa27.65■■■□□ 2.02
ME3-201ENST00000323418 TCIRG1Q13488 830 aa27.65■■■□□ 2.02
ME3-201ENST00000323418 HDGFL1Q5TGJ6 251 aa27.65■■■□□ 2.02
ME3-201ENST00000323418 RBM17Q96I25 401 aaKnown RBP27.65■■■□□ 2.02
ME3-201ENST00000323418 PPEF1O14829 653 aaPredicted RBP27.63■■■□□ 2.01
ME3-201ENST00000323418 JMYQ8N9B5 988 aa27.63■■■□□ 2.01
ME3-201ENST00000323418 NLRP3Q96P20 1036 aa27.63■■■□□ 2.01
ME3-201ENST00000323418 CCDC184Q52MB2 194 aa27.62■■■□□ 2.01
ME3-201ENST00000323418 DUSP27Q5VZP5 1158 aa27.62■■■□□ 2.01
ME3-201ENST00000323418 ABCC4O15439 1325 aa27.62■■■□□ 2.01
ME3-201ENST00000323418 PLBD2Q8NHP8 589 aa27.61■■■□□ 2.01
ME3-201ENST00000323418 TAF1DQ9H5J8 278 aaPredicted RBP27.61■■■□□ 2.01
ME3-201ENST00000323418 IFT57Q9NWB7 429 aa27.61■■■□□ 2.01
ME3-201ENST00000323418 DBF4Q9UBU7 674 aaPredicted RBP27.61■■■□□ 2.01
ME3-201ENST00000323418 COL4A1P02462 1669 aa27.61■■■□□ 2.01
ME3-201ENST00000323418 GRIPAP1Q4V328 841 aa27.6■■■□□ 2.01
ME3-201ENST00000323418 CHADLQ6NUI6 762 aa27.6■■■□□ 2.01
ME3-201ENST00000323418 IQCA1LA6NCM1 817 aa27.59■■■□□ 2.01
ME3-201ENST00000323418 ISCA1Q9BUE6 129 aa27.59■■■□□ 2.01
ME3-201ENST00000323418 DUOX1Q9NRD9 1551 aa27.59■■■□□ 2.01
ME3-201ENST00000323418 HCLS1P14317 486 aaPredicted RBP27.58■■■□□ 2.01
ME3-201ENST00000323418 ATP6V0A2Q9Y487 856 aa27.58■■■□□ 2.01
ME3-201ENST00000323418 ANKRD13DQ6ZTN6 518 aa27.57■■■□□ 2
ME3-201ENST00000323418 TRMT112Q9UI30 125 aaKnown RBP27.57■■■□□ 2
ME3-201ENST00000323418 SH3TC1Q8TE82 1336 aa27.57■■■□□ 2
ME3-201ENST00000323418 TCERG1O14776 1098 aaKnown RBP27.56■■■□□ 2
ME3-201ENST00000323418 HYPKQ9NX55 129 aa27.56■■■□□ 2
ME3-201ENST00000323418 GNAI1P63096 354 aa27.55■■■□□ 2
ME3-201ENST00000323418 LDHDQ86WU2 507 aa27.55■■■□□ 2
ME3-201ENST00000323418 GPC2Q8N158 579 aa27.55■■■□□ 2
ME3-201ENST00000323418 JDP2Q8WYK2 163 aa27.54■■■□□ 2
ME3-201ENST00000323418 PASKQ96RG2 1323 aa27.54■■■□□ 2
ME3-201ENST00000323418 HACL1Q9UJ83 578 aa27.54■■■□□ 2
ME3-201ENST00000323418 PCNTO95613 3336 aa27.54■■■□□ 2
ME3-201ENST00000323418 ZNF428Q96B54 188 aa27.53■■■□□ 2
ME3-201ENST00000323418 RTFDC1Q9BY42 306 aaPredicted RBP27.53■■■□□ 2
ME3-201ENST00000323418 EPHX2P34913 555 aa27.52■■■□□ 2
ME3-201ENST00000323418 CALD1Q05682 793 aaKnown RBP27.52■■■□□ 2
ME3-201ENST00000323418 C8orf58Q8NAV2 365 aa27.52■■■□□ 2
ME3-201ENST00000323418 ATP5J2-PTCD1G3V325 749 aa27.51■■□□□ 1.99
ME3-201ENST00000323418 BBOX1O75936 387 aa27.51■■□□□ 1.99
ME3-201ENST00000323418 IFFO2Q5TF58 517 aa27.51■■□□□ 1.99
ME3-201ENST00000323418 SP8Q8IXZ3 490 aa27.51■■□□□ 1.99
ME3-201ENST00000323418 LARGE2Q8N3Y3 721 aa27.51■■□□□ 1.99
ME3-201ENST00000323418 PHAXQ9H814 394 aaKnown RBP27.51■■□□□ 1.99
ME3-201ENST00000323418 ITGBL1O95965 494 aaPredicted RBP27.5■■□□□ 1.99
ME3-201ENST00000323418 TRIM28Q13263 835 aaKnown RBP27.5■■□□□ 1.99
ME3-201ENST00000323418 GRAPQ13588 217 aa27.5■■□□□ 1.99
ME3-201ENST00000323418 GRAPLQ8TC17 118 aaPredicted RBP27.5■■□□□ 1.99
ME3-201ENST00000323418 EIF6P56537 245 aaKnown RBP27.49■■□□□ 1.99
ME3-201ENST00000323418 AOC3Q16853 763 aa27.49■■□□□ 1.99
ME3-201ENST00000323418 FAM89AQ96GI7 184 aa27.49■■□□□ 1.99
ME3-201ENST00000323418 VPS33BQ9H267 617 aa27.49■■□□□ 1.99
ME3-201ENST00000323418 ELL2O00472 640 aaPredicted RBP27.48■■□□□ 1.99
ME3-201ENST00000323418 PPIP5K2O43314 1243 aa27.48■■□□□ 1.99
ME3-201ENST00000323418 SCNN1DP51172 638 aa27.48■■□□□ 1.99
ME3-201ENST00000323418 DDX46Q7L014 1031 aaKnown RBP27.48■■□□□ 1.99
ME3-201ENST00000323418 CREBZFQ9NS37 354 aa27.48■■□□□ 1.99
ME3-201ENST00000323418 SF3B3Q15393 1217 aaKnown RBP27.47■■□□□ 1.99
ME3-201ENST00000323418 CCDC27Q2M243 656 aa27.46■■□□□ 1.99
ME3-201ENST00000323418 EAPPQ56P03 285 aaPredicted RBP27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms