RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 NYXQ9GZU5 481 aa16.22■□□□□ 0.19
TPM3-204ENST00000323144 TRIM35Q9UPQ4 493 aa16.22■□□□□ 0.19
TPM3-204ENST00000323144 DDNO94850 711 aaPredicted RBP16.21■□□□□ 0.19
TPM3-204ENST00000323144 GTF2E1P29083 439 aaPredicted RBP16.21■□□□□ 0.19
TPM3-204ENST00000323144 GIGYF2Q6Y7W6 1299 aaKnown RBP16.21■□□□□ 0.19
TPM3-204ENST00000323144 ZNF34Q8IZ26 560 aa16.21■□□□□ 0.19
TPM3-204ENST00000323144 RUNDC1Q96C34 613 aa16.2■□□□□ 0.18
TPM3-204ENST00000323144 PRKRIP1Q9H875 184 aaPredicted RBP16.2■□□□□ 0.18
TPM3-204ENST00000323144 ADAMTS8Q9UP79 889 aa16.19■□□□□ 0.18
TPM3-204ENST00000323144 LAS1LQ9Y4W2 734 aaKnown RBP16.19■□□□□ 0.18
TPM3-204ENST00000323144 SPEF2Q9C093 1822 aa16.19■□□□□ 0.18
TPM3-204ENST00000323144 XAGE3Q8WTP9 111 aa16.18■□□□□ 0.18
TPM3-204ENST00000323144 RPGRQ92834 1020 aaKnown RBP16.18■□□□□ 0.18
TPM3-204ENST00000323144 ZNF428Q96B54 188 aa16.18■□□□□ 0.18
TPM3-204ENST00000323144 KLRG1Q96E93 195 aa16.18■□□□□ 0.18
TPM3-204ENST00000323144 BABAM1Q9NWV8 329 aa16.18■□□□□ 0.18
TPM3-204ENST00000323144 CHPF2Q9P2E5 772 aa16.18■□□□□ 0.18
TPM3-204ENST00000323144 IARSP41252 1262 aaKnown RBP16.17■□□□□ 0.18
TPM3-204ENST00000323144 AIMP1Q12904 312 aaKnown RBP16.17■□□□□ 0.18
TPM3-204ENST00000323144 DPY19L2Q6NUT2 758 aa16.17■□□□□ 0.18
TPM3-204ENST00000323144 CHL1O00533 1208 aa16.16■□□□□ 0.18
TPM3-204ENST00000323144 PPEF1O14829 653 aaPredicted RBP16.16■□□□□ 0.18
TPM3-204ENST00000323144 ABCC4O15439 1325 aa16.16■□□□□ 0.18
TPM3-204ENST00000323144 ALDH1B1P30837 517 aa16.15■□□□□ 0.18
TPM3-204ENST00000323144 HOXA10P31260 410 aaPredicted RBP16.15■□□□□ 0.18
TPM3-204ENST00000323144 PARP10Q53GL7 1025 aa16.15■□□□□ 0.18
TPM3-204ENST00000323144 COPS6Q7L5N1 327 aa16.15■□□□□ 0.18
TPM3-204ENST00000323144 RTKN2Q8IZC4 609 aa16.15■□□□□ 0.18
TPM3-204ENST00000323144 SYNE4Q8N205 404 aa16.15■□□□□ 0.18
TPM3-204ENST00000323144 L3MBTL3Q96JM7 780 aaPredicted RBP16.15■□□□□ 0.18
TPM3-204ENST00000323144 RNF123Q5XPI4 1314 aa16.15■□□□□ 0.18
TPM3-204ENST00000323144 TCERG1O14776 1098 aaKnown RBP16.14■□□□□ 0.17
TPM3-204ENST00000323144 HDGFL1Q5TGJ6 251 aa16.14■□□□□ 0.17
TPM3-204ENST00000323144 PPP1R42Q7Z4L9 355 aa16.14■□□□□ 0.17
TPM3-204ENST00000323144 NLRP10Q86W26 655 aa16.14■□□□□ 0.17
TPM3-204ENST00000323144 PSMD1Q99460 953 aa16.14■□□□□ 0.17
TPM3-204ENST00000323144 DDX21Q9NR30 783 aaKnown RBP eCLIP16.14■□□□□ 0.17
TPM3-204ENST00000323144 THSD7BQ9C0I4 1608 aa16.14■□□□□ 0.17
TPM3-204ENST00000323144 UTP14AQ9BVJ6 771 aaKnown RBP16.13■□□□□ 0.17
TPM3-204ENST00000323144 TAF1DQ9H5J8 278 aaPredicted RBP16.13■□□□□ 0.17
TPM3-204ENST00000323144 MBIPQ9NS73 344 aa16.13■□□□□ 0.17
TPM3-204ENST00000323144 MYH3P11055 1940 aa16.12■□□□□ 0.17
TPM3-204ENST00000323144 HCLS1P14317 486 aaPredicted RBP16.12■□□□□ 0.17
TPM3-204ENST00000323144 CHADLQ6NUI6 762 aa16.12■□□□□ 0.17
TPM3-204ENST00000323144 JMYQ8N9B5 988 aa16.12■□□□□ 0.17
TPM3-204ENST00000323144 RBM17Q96I25 401 aaKnown RBP16.12■□□□□ 0.17
TPM3-204ENST00000323144 CRAMP1Q96RY5 1269 aa16.12■□□□□ 0.17
TPM3-204ENST00000323144 TRPM7Q96QT4 1865 aa16.12■□□□□ 0.17
TPM3-204ENST00000323144 FZD9O00144 591 aa16.11■□□□□ 0.17
TPM3-204ENST00000323144 CCDC184Q52MB2 194 aa16.11■□□□□ 0.17
TPM3-204ENST00000323144 PCNTO95613 3336 aa16.11■□□□□ 0.17
TPM3-204ENST00000323144 IQCA1LA6NCM1 817 aa16.1■□□□□ 0.17
TPM3-204ENST00000323144 APAF1O14727 1248 aa16.1■□□□□ 0.17
TPM3-204ENST00000323144 HOXB7P09629 217 aa16.1■□□□□ 0.17
TPM3-204ENST00000323144 EAPPQ56P03 285 aaPredicted RBP16.1■□□□□ 0.17
TPM3-204ENST00000323144 LDHDQ86WU2 507 aa16.1■□□□□ 0.17
TPM3-204ENST00000323144 ZNF853P0CG23 659 aa16.09■□□□□ 0.17
TPM3-204ENST00000323144 AOC3Q16853 763 aa16.09■□□□□ 0.17
TPM3-204ENST00000323144 HSP90AB3PQ58FF7 597 aa16.09■□□□□ 0.17
TPM3-204ENST00000323144 IFFO2Q5TF58 517 aa16.09■□□□□ 0.17
TPM3-204ENST00000323144 DUSP27Q5VZP5 1158 aa16.09■□□□□ 0.17
TPM3-204ENST00000323144 CFAP44Q96MT7 982 aa16.09■□□□□ 0.17
TPM3-204ENST00000323144 NLRP3Q96P20 1036 aa16.09■□□□□ 0.17
TPM3-204ENST00000323144 HACL1Q9UJ83 578 aa16.09■□□□□ 0.17
TPM3-204ENST00000323144 PSME4Q14997 1843 aa16.09■□□□□ 0.17
TPM3-204ENST00000323144 SH3TC1Q8TE82 1336 aa16.09■□□□□ 0.17
TPM3-204ENST00000323144 PASKQ96RG2 1323 aa16.09■□□□□ 0.17
TPM3-204ENST00000323144 ZNF646O15015 1829 aaPredicted RBP16.08■□□□□ 0.17
TPM3-204ENST00000323144 EPHX2P34913 555 aa16.08■□□□□ 0.16
TPM3-204ENST00000323144 TCIRG1Q13488 830 aa16.08■□□□□ 0.16
TPM3-204ENST00000323144 SLC10A5Q5PT55 438 aa16.08■□□□□ 0.16
TPM3-204ENST00000323144 CC2D2BQ6DHV5 1058 aa16.08■□□□□ 0.16
TPM3-204ENST00000323144 LARGE2Q8N3Y3 721 aa16.08■□□□□ 0.16
TPM3-204ENST00000323144 TRMT112Q9UI30 125 aaKnown RBP16.08■□□□□ 0.16
TPM3-204ENST00000323144 A0A1B0GUL6 1792 aa16.08■□□□□ 0.16
TPM3-204ENST00000323144 ATP5J2-PTCD1G3V325 749 aa16.07■□□□□ 0.16
TPM3-204ENST00000323144 PPIP5K2O43314 1243 aa16.07■□□□□ 0.16
TPM3-204ENST00000323144 GPC2Q8N158 579 aa16.07■□□□□ 0.16
TPM3-204ENST00000323144 PLBD2Q8NHP8 589 aa16.07■□□□□ 0.16
TPM3-204ENST00000323144 IFT57Q9NWB7 429 aa16.07■□□□□ 0.16
TPM3-204ENST00000323144 DBF4Q9UBU7 674 aaPredicted RBP16.07■□□□□ 0.16
TPM3-204ENST00000323144 ATP6V0A2Q9Y487 856 aa16.07■□□□□ 0.16
TPM3-204ENST00000323144 GJA3Q9Y6H8 435 aa16.07■□□□□ 0.16
TPM3-204ENST00000323144 SCN9AQ15858 1988 aa16.07■□□□□ 0.16
TPM3-204ENST00000323144 SCNN1DP51172 638 aa16.06■□□□□ 0.16
TPM3-204ENST00000323144 JDP2Q8WYK2 163 aa16.06■□□□□ 0.16
TPM3-204ENST00000323144 ISCA1Q9BUE6 129 aa16.06■□□□□ 0.16
TPM3-204ENST00000323144 MKRN1Q9UHC7 482 aaKnown RBP16.06■□□□□ 0.16
TPM3-204ENST00000323144 CNTNAP1P78357 1384 aa16.05■□□□□ 0.16
TPM3-204ENST00000323144 EIF6P56537 245 aaKnown RBP16.05■□□□□ 0.16
TPM3-204ENST00000323144 GRAPQ13588 217 aa16.05■□□□□ 0.16
TPM3-204ENST00000323144 RTL5Q5HYW3 569 aaPredicted RBP16.05■□□□□ 0.16
TPM3-204ENST00000323144 NIM1KQ8IY84 436 aa16.05■□□□□ 0.16
TPM3-204ENST00000323144 GRAPLQ8TC17 118 aaPredicted RBP16.05■□□□□ 0.16
TPM3-204ENST00000323144 CREBZFQ9NS37 354 aa16.05■□□□□ 0.16
TPM3-204ENST00000323144 ELL2O00472 640 aaPredicted RBP16.04■□□□□ 0.16
TPM3-204ENST00000323144 HSPA1AP0DMV8 641 aaKnown RBP16.04■□□□□ 0.16
TPM3-204ENST00000323144 HSPA1BP0DMV9 641 aaKnown RBP16.04■□□□□ 0.16
TPM3-204ENST00000323144 MAP1SQ66K74 1059 aaPredicted RBP16.04■□□□□ 0.16
TPM3-204ENST00000323144 FAM89AQ96GI7 184 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms