RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 ZSWIM6Q9HCJ5 1215 aa26.88■■□□□ 1.89
PNKP-201ENST00000322344 PRPF40BQ6NWY9 871 aaKnown RBP26.87■■□□□ 1.89
PNKP-201ENST00000322344 CYP46A1Q9Y6A2 500 aa26.87■■□□□ 1.89
PNKP-201ENST00000322344 LAMB4A4D0S4 1761 aa26.87■■□□□ 1.89
PNKP-201ENST00000322344 CLCN1P35523 988 aa26.87■■□□□ 1.89
PNKP-201ENST00000322344 RABL6Q3YEC7 729 aaPredicted RBP26.87■■□□□ 1.89
PNKP-201ENST00000322344 EPHA10Q5JZY3 1008 aa26.87■■□□□ 1.89
PNKP-201ENST00000322344 SH2B1Q9NRF2 756 aaPredicted RBP26.86■■□□□ 1.89
PNKP-201ENST00000322344 PDRG1Q9NUG6 133 aa26.86■■□□□ 1.89
PNKP-201ENST00000322344 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.86■■□□□ 1.89
PNKP-201ENST00000322344 RPAP1Q9BWH6 1393 aaPredicted RBP26.86■■□□□ 1.89
PNKP-201ENST00000322344 NMIQ13287 307 aaPredicted RBP26.85■■□□□ 1.89
PNKP-201ENST00000322344 PLBD2Q8NHP8 589 aa26.85■■□□□ 1.89
PNKP-201ENST00000322344 MAP4K1Q92918 833 aa26.85■■□□□ 1.89
PNKP-201ENST00000322344 JAKMIP1Q96N16 626 aaKnown RBP26.85■■□□□ 1.89
PNKP-201ENST00000322344 TLR7Q9NYK1 1049 aaKnown RBP26.85■■□□□ 1.89
PNKP-201ENST00000322344 RFX5P48382 616 aaPredicted RBP26.84■■□□□ 1.89
PNKP-201ENST00000322344 LRSAM1Q6UWE0 723 aa26.84■■□□□ 1.89
PNKP-201ENST00000322344 SYAP1Q96A49 352 aaPredicted RBP26.84■■□□□ 1.89
PNKP-201ENST00000322344 CHAMP1Q96JM3 812 aa26.84■■□□□ 1.89
PNKP-201ENST00000322344 FSD1Q9BTV5 496 aa26.84■■□□□ 1.89
PNKP-201ENST00000322344 TMEM63CQ9P1W3 806 aa26.84■■□□□ 1.89
PNKP-201ENST00000322344 RBM27Q9P2N5 1060 aaKnown RBP26.84■■□□□ 1.89
PNKP-201ENST00000322344 RBM8AQ9Y5S9 174 aaKnown RBP26.84■■□□□ 1.89
PNKP-201ENST00000322344 GLI3P10071 1580 aa26.84■■□□□ 1.89
PNKP-201ENST00000322344 SMC3Q9UQE7 1217 aa26.83■■□□□ 1.89
PNKP-201ENST00000322344 ARFGEF2Q9Y6D5 1785 aa26.83■■□□□ 1.89
PNKP-201ENST00000322344 BOLA2Q9H3K6 86 aa26.83■■□□□ 1.89
PNKP-201ENST00000322344 ESPNB1AK53 854 aa26.82■■□□□ 1.88
PNKP-201ENST00000322344 PSMA5P28066 241 aa26.82■■□□□ 1.88
PNKP-201ENST00000322344 CREB3L3Q68CJ9 461 aa26.82■■□□□ 1.88
PNKP-201ENST00000322344 TMEM87AQ8NBN3 555 aa26.82■■□□□ 1.88
PNKP-201ENST00000322344 KLHDC4Q8TBB5 520 aa26.82■■□□□ 1.88
PNKP-201ENST00000322344 FAM227BQ96M60 508 aa26.82■■□□□ 1.88
PNKP-201ENST00000322344 PCDH11XQ9BZA7 1347 aa26.82■■□□□ 1.88
PNKP-201ENST00000322344 PCDH11YQ9BZA8 1340 aa26.82■■□□□ 1.88
PNKP-201ENST00000322344 ZSCAN22P10073 491 aaPredicted RBP26.82■■□□□ 1.88
PNKP-201ENST00000322344 KCNJ4P48050 445 aa26.82■■□□□ 1.88
PNKP-201ENST00000322344 PTPN12Q05209 780 aaKnown RBP26.82■■□□□ 1.88
PNKP-201ENST00000322344 RNF20Q5VTR2 975 aa26.82■■□□□ 1.88
PNKP-201ENST00000322344 AFDNP55196 1824 aaKnown RBP26.81■■□□□ 1.88
PNKP-201ENST00000322344 RFX7Q2KHR2 1363 aa26.81■■□□□ 1.88
PNKP-201ENST00000322344 WDR17Q8IZU2 1322 aa26.81■■□□□ 1.88
PNKP-201ENST00000322344 ATP5JP18859 108 aa26.81■■□□□ 1.88
PNKP-201ENST00000322344 PRIM1P49642 420 aaKnown RBP26.81■■□□□ 1.88
PNKP-201ENST00000322344 MED23Q9ULK4 1368 aa26.8■■□□□ 1.88
PNKP-201ENST00000322344 ADCK5Q3MIX3 580 aa26.8■■□□□ 1.88
PNKP-201ENST00000322344 UBE3BQ7Z3V4 1068 aa26.8■■□□□ 1.88
PNKP-201ENST00000322344 ATP6V1DQ9Y5K8 247 aa26.8■■□□□ 1.88
PNKP-201ENST00000322344 A0A087WZG4 1122 aa26.8■■□□□ 1.88
PNKP-201ENST00000322344 STX6O43752 255 aa26.8■■□□□ 1.88
PNKP-201ENST00000322344 TNNI3KQ59H18 835 aa26.8■■□□□ 1.88
PNKP-201ENST00000322344 RBSNQ9H1K0 784 aa26.8■■□□□ 1.88
PNKP-201ENST00000322344 NSFL1CQ9UNZ2 370 aaKnown RBP26.8■■□□□ 1.88
PNKP-201ENST00000322344 FPGT-TNNI3KV9GXZ4 949 aa26.8■■□□□ 1.88
PNKP-201ENST00000322344 JCADQ9P266 1359 aa26.79■■□□□ 1.88
PNKP-201ENST00000322344 ERVV-2B6SEH9 535 aa26.79■■□□□ 1.88
PNKP-201ENST00000322344 CASP7P55210 303 aa26.79■■□□□ 1.88
PNKP-201ENST00000322344 CPA1P15085 419 aa26.78■■□□□ 1.88
PNKP-201ENST00000322344 ZCRB1Q8TBF4 217 aaKnown RBP26.78■■□□□ 1.88
PNKP-201ENST00000322344 A0A0D9SFI3 127 aa26.78■■□□□ 1.88
PNKP-201ENST00000322344 SLC27A2O14975 620 aa26.78■■□□□ 1.88
PNKP-201ENST00000322344 SYT1P21579 422 aa26.78■■□□□ 1.88
PNKP-201ENST00000322344 PIP4K2AP48426 406 aaPredicted RBP26.78■■□□□ 1.88
PNKP-201ENST00000322344 BRINP3Q76B58 766 aa26.78■■□□□ 1.88
PNKP-201ENST00000322344 PDIA4P13667 645 aaKnown RBP26.77■■□□□ 1.88
PNKP-201ENST00000322344 HMG20BQ9P0W2 317 aa26.77■■□□□ 1.88
PNKP-201ENST00000322344 SYCE3A1L190 88 aa26.77■■□□□ 1.88
PNKP-201ENST00000322344 PHF14O94880 888 aa26.77■■□□□ 1.88
PNKP-201ENST00000322344 USP48Q86UV5 1035 aa26.77■■□□□ 1.88
PNKP-201ENST00000322344 ALDH8A1Q9H2A2 487 aaPredicted RBP26.77■■□□□ 1.88
PNKP-201ENST00000322344 PRDM11Q9NQV5 511 aa26.77■■□□□ 1.88
PNKP-201ENST00000322344 ATP5J2-PTCD1G3V325 749 aa26.76■■□□□ 1.87
PNKP-201ENST00000322344 PTCD1O75127 700 aaKnown RBP26.76■■□□□ 1.87
PNKP-201ENST00000322344 TFCP2Q12800 502 aa26.76■■□□□ 1.87
PNKP-201ENST00000322344 ANKRD1Q15327 319 aa26.76■■□□□ 1.87
PNKP-201ENST00000322344 DBNLQ9UJU6 430 aaKnown RBP26.76■■□□□ 1.87
PNKP-201ENST00000322344 LARGE1O95461 756 aa26.75■■□□□ 1.87
PNKP-201ENST00000322344 H7C1W4 665 aa26.75■■□□□ 1.87
PNKP-201ENST00000322344 F13A1P00488 732 aa26.75■■□□□ 1.87
PNKP-201ENST00000322344 NKX1-1Q15270 411 aaPredicted RBP26.75■■□□□ 1.87
PNKP-201ENST00000322344 TSGA10IPQ3SY00 556 aa26.75■■□□□ 1.87
PNKP-201ENST00000322344 TOM1L2Q6ZVM7 507 aa26.75■■□□□ 1.87
PNKP-201ENST00000322344 CCDC83Q8IWF9 413 aa26.75■■□□□ 1.87
PNKP-201ENST00000322344 LARP6Q9BRS8 491 aaKnown RBP26.74■■□□□ 1.87
PNKP-201ENST00000322344 JARID2Q92833 1246 aaPredicted RBP26.73■■□□□ 1.87
PNKP-201ENST00000322344 UBR2Q8IWV8 1755 aa26.73■■□□□ 1.87
PNKP-201ENST00000322344 NBPF26B4DH59 902 aa26.73■■□□□ 1.87
PNKP-201ENST00000322344 GJB2P29033 226 aa26.73■■□□□ 1.87
PNKP-201ENST00000322344 CSPP1Q1MSJ5 1256 aa26.73■■□□□ 1.87
PNKP-201ENST00000322344 NBPF14Q5TI25 921 aa26.73■■□□□ 1.87
PNKP-201ENST00000322344 NBPF10Q6P3W6 841 aaKnown RBP26.73■■□□□ 1.87
PNKP-201ENST00000322344 BLOC1S2Q6QNY1 142 aa26.73■■□□□ 1.87
PNKP-201ENST00000322344 NBPF15Q8N660 670 aa26.73■■□□□ 1.87
PNKP-201ENST00000322344 COL5A2P05997 1499 aaPredicted RBP26.72■■□□□ 1.87
PNKP-201ENST00000322344 HS1BP3Q53T59 392 aa26.72■■□□□ 1.87
PNKP-201ENST00000322344 CWC25Q9NXE8 425 aaPredicted RBP26.72■■□□□ 1.87
PNKP-201ENST00000322344 SOS2Q07890 1332 aaPredicted RBP26.72■■□□□ 1.87
PNKP-201ENST00000322344 XIRP1Q702N8 1843 aaKnown RBP26.72■■□□□ 1.87
PNKP-201ENST00000322344 TAF5LO75529 589 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms