RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 A0A0D9SFI3 127 aa20.89■□□□□ 0.93
COL9A1-201ENST00000320755 N4BP2Q86UW6 1770 aaPredicted RBP20.88■□□□□ 0.93
COL9A1-201ENST00000320755 HEG1Q9ULI3 1381 aa20.88■□□□□ 0.93
COL9A1-201ENST00000320755 NEURL1BA8MQ27 555 aa20.88■□□□□ 0.93
COL9A1-201ENST00000320755 CREB3L3Q68CJ9 461 aa20.88■□□□□ 0.93
COL9A1-201ENST00000320755 NPHP4O75161 1426 aaPredicted RBP20.88■□□□□ 0.93
COL9A1-201ENST00000320755 NPHP3Q7Z494 1330 aa20.88■□□□□ 0.93
COL9A1-201ENST00000320755 GCKRQ14397 625 aa20.87■□□□□ 0.93
COL9A1-201ENST00000320755 TTC5Q8N0Z6 440 aa20.87■□□□□ 0.93
COL9A1-201ENST00000320755 ME3Q16798 604 aa20.87■□□□□ 0.93
COL9A1-201ENST00000320755 ANKRD13DQ6ZTN6 518 aa20.87■□□□□ 0.93
COL9A1-201ENST00000320755 TAF6LQ9Y6J9 622 aa20.87■□□□□ 0.93
COL9A1-201ENST00000320755 LMO7Q8WWI1 1683 aa20.87■□□□□ 0.93
COL9A1-201ENST00000320755 F13A1P00488 732 aa20.86■□□□□ 0.93
COL9A1-201ENST00000320755 NCAPD2Q15021 1401 aa20.86■□□□□ 0.93
COL9A1-201ENST00000320755 NECTIN1Q15223 517 aa20.86■□□□□ 0.93
COL9A1-201ENST00000320755 UBE3BQ7Z3V4 1068 aa20.86■□□□□ 0.93
COL9A1-201ENST00000320755 DNM1Q05193 864 aaKnown RBP20.86■□□□□ 0.93
COL9A1-201ENST00000320755 ZSWIM6Q9HCJ5 1215 aa20.86■□□□□ 0.93
COL9A1-201ENST00000320755 PTMAP06454 111 aaKnown RBP20.86■□□□□ 0.93
COL9A1-201ENST00000320755 PHKG2P15735 406 aa20.86■□□□□ 0.93
COL9A1-201ENST00000320755 VPS53Q5VIR6 699 aa20.86■□□□□ 0.93
COL9A1-201ENST00000320755 FERMT3Q86UX7 667 aa20.86■□□□□ 0.93
COL9A1-201ENST00000320755 PDLIM2Q96JY6 352 aa20.86■□□□□ 0.93
COL9A1-201ENST00000320755 CHMP3Q9Y3E7 222 aa20.86■□□□□ 0.93
COL9A1-201ENST00000320755 CHGBP05060 677 aa20.85■□□□□ 0.93
COL9A1-201ENST00000320755 STK3Q13188 491 aa20.84■□□□□ 0.93
COL9A1-201ENST00000320755 C19orf44Q9H6X5 657 aa20.84■□□□□ 0.93
COL9A1-201ENST00000320755 TPCN1Q9ULQ1 816 aa20.84■□□□□ 0.93
COL9A1-201ENST00000320755 METTL22Q9BUU2 404 aaPredicted RBP20.84■□□□□ 0.93
COL9A1-201ENST00000320755 SLC27A2O14975 620 aa20.84■□□□□ 0.93
COL9A1-201ENST00000320755 ATF3P18847 181 aa20.84■□□□□ 0.93
COL9A1-201ENST00000320755 ZNF589Q86UQ0 364 aaPredicted RBP20.84■□□□□ 0.93
COL9A1-201ENST00000320755 PLCB2Q00722 1185 aa20.83■□□□□ 0.93
COL9A1-201ENST00000320755 MAP4K1Q92918 833 aa20.83■□□□□ 0.93
COL9A1-201ENST00000320755 DNAJC2Q99543 621 aaKnown RBP20.83■□□□□ 0.93
COL9A1-201ENST00000320755 PHF14O94880 888 aa20.83■□□□□ 0.92
COL9A1-201ENST00000320755 FAM173BQ6P4H8 233 aa20.83■□□□□ 0.92
COL9A1-201ENST00000320755 IFNL2Q8IZJ0 200 aa20.83■□□□□ 0.92
COL9A1-201ENST00000320755 TFCP2Q12800 502 aa20.82■□□□□ 0.92
COL9A1-201ENST00000320755 UTYO14607 1347 aa20.82■□□□□ 0.92
COL9A1-201ENST00000320755 ST3GAL1Q11201 340 aa20.82■□□□□ 0.92
COL9A1-201ENST00000320755 MTMR6Q9Y217 621 aa20.82■□□□□ 0.92
COL9A1-201ENST00000320755 LARP1BQ659C4 914 aaKnown RBP20.81■□□□□ 0.92
COL9A1-201ENST00000320755 NOL7Q9UMY1 257 aaKnown RBP20.81■□□□□ 0.92
COL9A1-201ENST00000320755 ATP6V1DQ9Y5K8 247 aa20.81■□□□□ 0.92
COL9A1-201ENST00000320755 A0A087WZG4 1122 aa20.81■□□□□ 0.92
COL9A1-201ENST00000320755 CYP27B1O15528 508 aa20.81■□□□□ 0.92
COL9A1-201ENST00000320755 SNRPA1P09661 255 aaKnown RBP20.81■□□□□ 0.92
COL9A1-201ENST00000320755 BLOC1S2Q6QNY1 142 aa20.81■□□□□ 0.92
COL9A1-201ENST00000320755 ZSCAN31Q96LW9 406 aaPredicted RBP20.81■□□□□ 0.92
COL9A1-201ENST00000320755 RGPD5Q99666 1765 aa20.81■□□□□ 0.92
COL9A1-201ENST00000320755 HIP1O00291 1037 aa20.81■□□□□ 0.92
COL9A1-201ENST00000320755 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.81■□□□□ 0.92
COL9A1-201ENST00000320755 KDM6AO15550 1401 aaPredicted RBP20.81■□□□□ 0.92
COL9A1-201ENST00000320755 HCLS1P14317 486 aaPredicted RBP20.8■□□□□ 0.92
COL9A1-201ENST00000320755 TM6SF1Q9BZW5 370 aa20.8■□□□□ 0.92
COL9A1-201ENST00000320755 SH2B1Q9NRF2 756 aaPredicted RBP20.8■□□□□ 0.92
COL9A1-201ENST00000320755 CABP4P57796 275 aa20.8■□□□□ 0.92
COL9A1-201ENST00000320755 UBE2HP62256 183 aa20.8■□□□□ 0.92
COL9A1-201ENST00000320755 CCDC183Q5T5S1 534 aa20.8■□□□□ 0.92
COL9A1-201ENST00000320755 GIMAP6Q6P9H5 292 aa20.8■□□□□ 0.92
COL9A1-201ENST00000320755 CCDC129Q6ZRS4 1044 aa20.8■□□□□ 0.92
COL9A1-201ENST00000320755 DBNLQ9UJU6 430 aaKnown RBP20.8■□□□□ 0.92
COL9A1-201ENST00000320755 C1orf167Q5SNV9 1468 aa20.79■□□□□ 0.92
COL9A1-201ENST00000320755 RNF20Q5VTR2 975 aa20.79■□□□□ 0.92
COL9A1-201ENST00000320755 SEC62Q99442 399 aaKnown RBP20.79■□□□□ 0.92
COL9A1-201ENST00000320755 USP25Q9UHP3 1055 aa20.79■□□□□ 0.92
COL9A1-201ENST00000320755 PSMA5P28066 241 aa20.79■□□□□ 0.92
COL9A1-201ENST00000320755 SLIT3O75094 1523 aa20.78■□□□□ 0.92
COL9A1-201ENST00000320755 R3HCC1Q9Y3T6 440 aaKnown RBP20.78■□□□□ 0.92
COL9A1-201ENST00000320755 PTPN12Q05209 780 aaKnown RBP20.78■□□□□ 0.92
COL9A1-201ENST00000320755 FMNL2Q96PY5 1086 aa20.78■□□□□ 0.92
COL9A1-201ENST00000320755 DBNDD2Q9BQY9 259 aa20.78■□□□□ 0.92
COL9A1-201ENST00000320755 HS1BP3Q53T59 392 aa20.77■□□□□ 0.92
COL9A1-201ENST00000320755 DDX46Q7L014 1031 aaKnown RBP20.77■□□□□ 0.92
COL9A1-201ENST00000320755 TNNI3KQ59H18 835 aa20.77■□□□□ 0.92
COL9A1-201ENST00000320755 NEUROD6Q96NK8 337 aa20.77■□□□□ 0.92
COL9A1-201ENST00000320755 CCDC39Q9UFE4 941 aa20.77■□□□□ 0.92
COL9A1-201ENST00000320755 ZKSCAN5Q9Y2L8 839 aa20.77■□□□□ 0.92
COL9A1-201ENST00000320755 FPGT-TNNI3KV9GXZ4 949 aa20.77■□□□□ 0.92
COL9A1-201ENST00000320755 OVOS2A0A0G2JMS6 1433 aa20.77■□□□□ 0.92
COL9A1-201ENST00000320755 MEGF6O75095 1541 aa20.77■□□□□ 0.91
COL9A1-201ENST00000320755 CDC37L1Q7L3B6 337 aa20.76■□□□□ 0.91
COL9A1-201ENST00000320755 TMEM87AQ8NBN3 555 aa20.76■□□□□ 0.91
COL9A1-201ENST00000320755 KCNB2Q92953 911 aa20.76■□□□□ 0.91
COL9A1-201ENST00000320755 ZNF830Q96NB3 372 aaPredicted RBP20.76■□□□□ 0.91
COL9A1-201ENST00000320755 OFD1O75665 1012 aa20.76■□□□□ 0.91
COL9A1-201ENST00000320755 LMBR1LQ6UX01 489 aa20.76■□□□□ 0.91
COL9A1-201ENST00000320755 DCAF5Q96JK2 942 aa20.76■□□□□ 0.91
COL9A1-201ENST00000320755 SLFNL1Q499Z3 407 aa20.76■□□□□ 0.91
COL9A1-201ENST00000320755 TFIP11Q9UBB9 837 aaKnown RBP20.76■□□□□ 0.91
COL9A1-201ENST00000320755 LRRC2Q9BYS8 371 aa20.75■□□□□ 0.91
COL9A1-201ENST00000320755 TAF5LO75529 589 aa20.74■□□□□ 0.91
COL9A1-201ENST00000320755 COPRSQ9NQ92 184 aa20.74■□□□□ 0.91
COL9A1-201ENST00000320755 RPS6KB1P23443 525 aa20.74■□□□□ 0.91
COL9A1-201ENST00000320755 ZNF330Q9Y3S2 320 aaPredicted RBP20.74■□□□□ 0.91
COL9A1-201ENST00000320755 PHRF1Q9P1Y6 1649 aaKnown RBP20.73■□□□□ 0.91
COL9A1-201ENST00000320755 RFX5P48382 616 aaPredicted RBP20.73■□□□□ 0.91
COL9A1-201ENST00000320755 LRP10Q7Z4F1 713 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms