RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 MYH14Q7Z406 1995 aaKnown RBP17.36■□□□□ 0.37
VRK3-201ENST00000316763 ATP8B2P98198 1209 aa17.36■□□□□ 0.37
VRK3-201ENST00000316763 REC8O95072 547 aa17.35■□□□□ 0.37
VRK3-201ENST00000316763 IGKV5-2P06315 115 aa17.35■□□□□ 0.37
VRK3-201ENST00000316763 UBTFL1P0CB47 393 aaPredicted RBP17.35■□□□□ 0.37
VRK3-201ENST00000316763 USP26Q9BXU7 913 aa17.35■□□□□ 0.37
VRK3-201ENST00000316763 CWF19L2Q2TBE0 894 aaKnown RBP17.35■□□□□ 0.37
VRK3-201ENST00000316763 L1TD1Q5T7N2 865 aaKnown RBP17.35■□□□□ 0.37
VRK3-201ENST00000316763 UTYO14607 1347 aa17.34■□□□□ 0.37
VRK3-201ENST00000316763 NBPF7P0C2Y1 421 aaPredicted RBP17.34■□□□□ 0.37
VRK3-201ENST00000316763 CRKLP46109 303 aaKnown RBP17.34■□□□□ 0.37
VRK3-201ENST00000316763 PDE1AP54750 535 aa17.34■□□□□ 0.37
VRK3-201ENST00000316763 NEXNQ0ZGT2 675 aa17.34■□□□□ 0.37
VRK3-201ENST00000316763 TTLL7Q6ZT98 887 aa17.34■□□□□ 0.37
VRK3-201ENST00000316763 LRRCC1Q9C099 1032 aa17.34■□□□□ 0.37
VRK3-201ENST00000316763 NEURL1BA8MQ27 555 aa17.33■□□□□ 0.37
VRK3-201ENST00000316763 INTS5Q6P9B9 1019 aaKnown RBP17.33■□□□□ 0.37
VRK3-201ENST00000316763 LRRFIP2Q9Y608 721 aaKnown RBP17.33■□□□□ 0.37
VRK3-201ENST00000316763 PTMSP20962 102 aa17.33■□□□□ 0.36
VRK3-201ENST00000316763 GBP4Q96PP9 640 aa17.33■□□□□ 0.36
VRK3-201ENST00000316763 C4BP0C0L5 1744 aa17.32■□□□□ 0.36
VRK3-201ENST00000316763 MYD88Q99836 296 aa17.32■□□□□ 0.36
VRK3-201ENST00000316763 CCDC87Q9NVE4 849 aa17.32■□□□□ 0.36
VRK3-201ENST00000316763 EXOC6BQ9Y2D4 811 aa17.32■□□□□ 0.36
VRK3-201ENST00000316763 GRM8O00222 908 aa17.31■□□□□ 0.36
VRK3-201ENST00000316763 ERC2O15083 957 aa17.31■□□□□ 0.36
VRK3-201ENST00000316763 RC3H1Q5TC82 1133 aaKnown RBP17.31■□□□□ 0.36
VRK3-201ENST00000316763 ZBTB1Q9Y2K1 713 aa17.31■□□□□ 0.36
VRK3-201ENST00000316763 RREB1Q92766 1687 aa17.31■□□□□ 0.36
VRK3-201ENST00000316763 CNTNAP4Q9C0A0 1308 aa17.31■□□□□ 0.36
VRK3-201ENST00000316763 GCKRQ14397 625 aa17.31■□□□□ 0.36
VRK3-201ENST00000316763 RAB3GAP1Q15042 981 aa17.31■□□□□ 0.36
VRK3-201ENST00000316763 C9orf78Q9NZ63 289 aaPredicted RBP17.31■□□□□ 0.36
VRK3-201ENST00000316763 ARFGEF2Q9Y6D5 1785 aa17.3■□□□□ 0.36
VRK3-201ENST00000316763 TRAK2O60296 914 aa17.3■□□□□ 0.36
VRK3-201ENST00000316763 CD2BP2O95400 341 aaKnown RBP17.3■□□□□ 0.36
VRK3-201ENST00000316763 HDAC5Q9UQL6 1122 aa17.3■□□□□ 0.36
VRK3-201ENST00000316763 IL6STP40189 918 aaPredicted RBP17.29■□□□□ 0.36
VRK3-201ENST00000316763 NUP188Q5SRE5 1749 aa17.29■□□□□ 0.36
VRK3-201ENST00000316763 PNMA6EA0A0J9YXQ4 647 aa17.29■□□□□ 0.36
VRK3-201ENST00000316763 MX1P20591 662 aa17.29■□□□□ 0.36
VRK3-201ENST00000316763 IL27Q8NEV9 243 aa17.29■□□□□ 0.36
VRK3-201ENST00000316763 TNPO1Q92973 898 aaKnown RBP17.29■□□□□ 0.36
VRK3-201ENST00000316763 BRPF3Q9ULD4 1205 aa17.29■□□□□ 0.36
VRK3-201ENST00000316763 ST18O60284 1047 aa17.28■□□□□ 0.36
VRK3-201ENST00000316763 HMGB2P26583 209 aaKnown RBP17.28■□□□□ 0.36
VRK3-201ENST00000316763 MTX1Q13505 466 aa17.28■□□□□ 0.36
VRK3-201ENST00000316763 SMIM5Q71RC9 77 aa17.28■□□□□ 0.36
VRK3-201ENST00000316763 GNPATO15228 680 aa17.27■□□□□ 0.36
VRK3-201ENST00000316763 RAB11FIP3O75154 756 aa17.27■□□□□ 0.36
VRK3-201ENST00000316763 SSH3Q8TE77 659 aa17.27■□□□□ 0.36
VRK3-201ENST00000316763 ZBTB3Q9H5J0 574 aa17.27■□□□□ 0.36
VRK3-201ENST00000316763 ZNF330Q9Y3S2 320 aaPredicted RBP17.27■□□□□ 0.36
VRK3-201ENST00000316763 AOX1Q06278 1338 aa17.27■□□□□ 0.36
VRK3-201ENST00000316763 SALL3Q9BXA9 1300 aa17.27■□□□□ 0.36
VRK3-201ENST00000316763 UBR3Q6ZT12 1888 aa17.27■□□□□ 0.35
VRK3-201ENST00000316763 RPS6KA4O75676 772 aa17.27■□□□□ 0.35
VRK3-201ENST00000316763 EIF5P55010 431 aaKnown RBP17.27■□□□□ 0.35
VRK3-201ENST00000316763 POLA2Q14181 598 aa17.27■□□□□ 0.35
VRK3-201ENST00000316763 KIF6Q6ZMV9 814 aa17.27■□□□□ 0.35
VRK3-201ENST00000316763 AMIGO3Q86WK7 504 aa17.27■□□□□ 0.35
VRK3-201ENST00000316763 AKT1S1Q96B36 256 aa17.27■□□□□ 0.35
VRK3-201ENST00000316763 AK7Q96M32 723 aa17.27■□□□□ 0.35
VRK3-201ENST00000316763 STAP2Q9UGK3 403 aa17.27■□□□□ 0.35
VRK3-201ENST00000316763 MAP3K15Q6ZN16 1313 aa17.27■□□□□ 0.35
VRK3-201ENST00000316763 ATP5J2-PTCD1G3V325 749 aa17.26■□□□□ 0.35
VRK3-201ENST00000316763 ZNF827Q17R98 1081 aa17.26■□□□□ 0.35
VRK3-201ENST00000316763 SKOR2Q2VWA4 1001 aaPredicted RBP17.26■□□□□ 0.35
VRK3-201ENST00000316763 KAZALD1Q96I82 304 aa17.26■□□□□ 0.35
VRK3-201ENST00000316763 FOXD4L1Q9NU39 408 aa17.26■□□□□ 0.35
VRK3-201ENST00000316763 TUBGCP6Q96RT7 1819 aa17.26■□□□□ 0.35
VRK3-201ENST00000316763 COL15A1P39059 1388 aa17.26■□□□□ 0.35
VRK3-201ENST00000316763 GOLGA6L3A6NEY3 463 aa17.25■□□□□ 0.35
VRK3-201ENST00000316763 TRIM28Q13263 835 aaKnown RBP17.25■□□□□ 0.35
VRK3-201ENST00000316763 TCIRG1Q13488 830 aa17.25■□□□□ 0.35
VRK3-201ENST00000316763 PPP1R42Q7Z4L9 355 aa17.25■□□□□ 0.35
VRK3-201ENST00000316763 ISCA1Q9BUE6 129 aa17.25■□□□□ 0.35
VRK3-201ENST00000316763 RTCBQ9Y3I0 505 aaKnown RBP17.25■□□□□ 0.35
VRK3-201ENST00000316763 CCDC191Q8NCU4 936 aa17.25■□□□□ 0.35
VRK3-201ENST00000316763 SUCLG2Q96I99 432 aa17.25■□□□□ 0.35
VRK3-201ENST00000316763 ANO8Q9HCE9 1232 aaPredicted RBP17.25■□□□□ 0.35
VRK3-201ENST00000316763 ERVV-1B6SEH8 477 aa17.24■□□□□ 0.35
VRK3-201ENST00000316763 GOLGA6L22H0YM25 854 aa17.24■□□□□ 0.35
VRK3-201ENST00000316763 MCCP23508 829 aa17.24■□□□□ 0.35
VRK3-201ENST00000316763 CASP7P55210 303 aa17.24■□□□□ 0.35
VRK3-201ENST00000316763 GIGYF2Q6Y7W6 1299 aaKnown RBP17.24■□□□□ 0.35
VRK3-201ENST00000316763 ARXQ96QS3 562 aa17.23■□□□□ 0.35
VRK3-201ENST00000316763 CWC22Q9HCG8 908 aaKnown RBP17.23■□□□□ 0.35
VRK3-201ENST00000316763 CWC25Q9NXE8 425 aaPredicted RBP17.23■□□□□ 0.35
VRK3-201ENST00000316763 A0A087WZG4 1122 aa17.23■□□□□ 0.35
VRK3-201ENST00000316763 TRIM6-TRIM34B2RNG4 842 aa17.23■□□□□ 0.35
VRK3-201ENST00000316763 H7C1W4 665 aa17.23■□□□□ 0.35
VRK3-201ENST00000316763 SRGAP3O43295 1099 aa17.23■□□□□ 0.35
VRK3-201ENST00000316763 NUCB2P80303 420 aa17.23■□□□□ 0.35
VRK3-201ENST00000316763 HSP90AB4PQ58FF6 505 aa17.23■□□□□ 0.35
VRK3-201ENST00000316763 ESYT1Q9BSJ8 1104 aa17.23■□□□□ 0.35
VRK3-201ENST00000316763 TFCP2L1Q9NZI6 479 aa17.23■□□□□ 0.35
VRK3-201ENST00000316763 PHF14O94880 888 aa17.22■□□□□ 0.35
VRK3-201ENST00000316763 SLC15A2Q16348 729 aa17.22■□□□□ 0.35
VRK3-201ENST00000316763 DZIP3Q86Y13 1208 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms