RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 STX1AQ16623 288 aa19.01■□□□□ 0.63
BRD3-201ENST00000303407 CWC15Q9P013 229 aaKnown RBP19.01■□□□□ 0.63
BRD3-201ENST00000303407 CNPY2Q9Y2B0 182 aa19.01■□□□□ 0.63
BRD3-201ENST00000303407 KDM2BQ8NHM5 1336 aa19.01■□□□□ 0.63
BRD3-201ENST00000303407 ZBTB7BO15156 539 aaPredicted RBP19.01■□□□□ 0.63
BRD3-201ENST00000303407 TMEM132AQ24JP5 1023 aa19.01■□□□□ 0.63
BRD3-201ENST00000303407 LRSAM1Q6UWE0 723 aa19.01■□□□□ 0.63
BRD3-201ENST00000303407 KDM6BO15054 1643 aa19.01■□□□□ 0.63
BRD3-201ENST00000303407 ZMYM3Q14202 1370 aa19.01■□□□□ 0.63
BRD3-201ENST00000303407 EIF5P55010 431 aaKnown RBP19.01■□□□□ 0.63
BRD3-201ENST00000303407 CNNM3Q8NE01 707 aa19.01■□□□□ 0.63
BRD3-201ENST00000303407 ZCRB1Q8TBF4 217 aaKnown RBP19.01■□□□□ 0.63
BRD3-201ENST00000303407 KLHL10Q6JEL2 608 aa19■□□□□ 0.63
BRD3-201ENST00000303407 IL13P35225 146 aa19■□□□□ 0.63
BRD3-201ENST00000303407 PTPN14Q15678 1187 aa19■□□□□ 0.63
BRD3-201ENST00000303407 EDC4Q6P2E9 1401 aaKnown RBP19■□□□□ 0.63
BRD3-201ENST00000303407 METAP2P50579 478 aaKnown RBP eCLIP19■□□□□ 0.63
BRD3-201ENST00000303407 NMIQ13287 307 aaPredicted RBP19■□□□□ 0.63
BRD3-201ENST00000303407 CATIPQ7Z7H3 387 aa19■□□□□ 0.63
BRD3-201ENST00000303407 ZNF76P36508 570 aa19■□□□□ 0.63
BRD3-201ENST00000303407 DMRT2Q9Y5R5 561 aa18.99■□□□□ 0.63
BRD3-201ENST00000303407 BRF1Q92994 677 aa18.99■□□□□ 0.63
BRD3-201ENST00000303407 ORC3Q9UBD5 711 aaPredicted RBP18.99■□□□□ 0.63
BRD3-201ENST00000303407 TRIM35Q9UPQ4 493 aa18.99■□□□□ 0.63
BRD3-201ENST00000303407 TARBP1Q13395 1621 aaKnown RBP18.99■□□□□ 0.63
BRD3-201ENST00000303407 ERLIN1O75477 346 aa18.99■□□□□ 0.63
BRD3-201ENST00000303407 IARSP41252 1262 aaKnown RBP18.99■□□□□ 0.63
BRD3-201ENST00000303407 USP48Q86UV5 1035 aa18.99■□□□□ 0.63
BRD3-201ENST00000303407 TTC41PQ6P2S7 1318 aa18.99■□□□□ 0.63
BRD3-201ENST00000303407 INSRP06213 1382 aa18.99■□□□□ 0.63
BRD3-201ENST00000303407 AXDND1Q5T1B0 1012 aaPredicted RBP18.98■□□□□ 0.63
BRD3-201ENST00000303407 PLXNC1O60486 1568 aa18.98■□□□□ 0.63
BRD3-201ENST00000303407 TOP1P11387 765 aaKnown RBP18.98■□□□□ 0.63
BRD3-201ENST00000303407 UVSSAQ2YD98 709 aa18.98■□□□□ 0.63
BRD3-201ENST00000303407 MCMDC2Q4G0Z9 681 aa18.98■□□□□ 0.63
BRD3-201ENST00000303407 KIAA1328Q86T90 577 aa18.98■□□□□ 0.63
BRD3-201ENST00000303407 ZNF444Q8N0Y2 327 aaPredicted RBP18.98■□□□□ 0.63
BRD3-201ENST00000303407 NLRP5P59047 1200 aa18.98■□□□□ 0.63
BRD3-201ENST00000303407 MICU3Q86XE3 530 aa18.98■□□□□ 0.63
BRD3-201ENST00000303407 TCEANC2Q96MN5 208 aa18.98■□□□□ 0.63
BRD3-201ENST00000303407 LRRC2Q9BYS8 371 aa18.98■□□□□ 0.63
BRD3-201ENST00000303407 ZSCAN16Q9H4T2 348 aaPredicted RBP18.98■□□□□ 0.63
BRD3-201ENST00000303407 MAP3K19Q56UN5 1328 aa18.98■□□□□ 0.63
BRD3-201ENST00000303407 PPP1R1BQ9UD71 204 aaPredicted RBP18.98■□□□□ 0.63
BRD3-201ENST00000303407 ARHGAP29Q52LW3 1261 aa18.97■□□□□ 0.63
BRD3-201ENST00000303407 LMBR1LQ6UX01 489 aa18.97■□□□□ 0.63
BRD3-201ENST00000303407 MFSD6Q6ZSS7 791 aa18.97■□□□□ 0.63
BRD3-201ENST00000303407 CDC5LQ99459 802 aaKnown RBP18.97■□□□□ 0.63
BRD3-201ENST00000303407 CWF19L2Q2TBE0 894 aaKnown RBP18.97■□□□□ 0.63
BRD3-201ENST00000303407 GIMAP6Q6P9H5 292 aa18.97■□□□□ 0.63
BRD3-201ENST00000303407 KIF2AO00139 706 aaPredicted RBP18.97■□□□□ 0.63
BRD3-201ENST00000303407 BIN1O00499 593 aa18.97■□□□□ 0.63
BRD3-201ENST00000303407 MCM5P33992 734 aa18.97■□□□□ 0.63
BRD3-201ENST00000303407 RAB3GAP1Q15042 981 aa18.97■□□□□ 0.63
BRD3-201ENST00000303407 CCDC66A2RUB6 948 aa18.97■□□□□ 0.63
BRD3-201ENST00000303407 ZSCAN12O43309 604 aa18.97■□□□□ 0.63
BRD3-201ENST00000303407 UQCRFS1P1P0C7P4 283 aa18.97■□□□□ 0.63
BRD3-201ENST00000303407 LEKR1Q6ZMV7 388 aa18.96■□□□□ 0.63
BRD3-201ENST00000303407 PTPRTO14522 1441 aa18.96■□□□□ 0.63
BRD3-201ENST00000303407 PDCL2Q8N4E4 241 aa18.96■□□□□ 0.63
BRD3-201ENST00000303407 SPATA31E1Q6ZUB1 1445 aa18.96■□□□□ 0.63
BRD3-201ENST00000303407 Q6ZUG5 572 aa18.96■□□□□ 0.63
BRD3-201ENST00000303407 PHF23Q9BUL5 403 aaPredicted RBP18.96■□□□□ 0.63
BRD3-201ENST00000303407 RPGRQ92834 1020 aaKnown RBP18.96■□□□□ 0.63
BRD3-201ENST00000303407 MYO5CQ9NQX4 1742 aa18.96■□□□□ 0.63
BRD3-201ENST00000303407 ZNF397Q8NF99 534 aaPredicted RBP18.96■□□□□ 0.63
BRD3-201ENST00000303407 SLC26A6Q9BXS9 759 aa18.96■□□□□ 0.63
BRD3-201ENST00000303407 RRP9O43818 475 aaKnown RBP18.95■□□□□ 0.62
BRD3-201ENST00000303407 NPHP3Q7Z494 1330 aa18.95■□□□□ 0.62
BRD3-201ENST00000303407 KLF18A0A0U1RQI7 1052 aa18.95■□□□□ 0.62
BRD3-201ENST00000303407 NFATC2IPQ8NCF5 419 aa18.95■□□□□ 0.62
BRD3-201ENST00000303407 LINS1Q8NG48 757 aa18.95■□□□□ 0.62
BRD3-201ENST00000303407 USP26Q9BXU7 913 aa18.95■□□□□ 0.62
BRD3-201ENST00000303407 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.95■□□□□ 0.621e-5■■■■□ 25.8
BRD3-201ENST00000303407 G2E3Q7L622 706 aa18.95■□□□□ 0.62
BRD3-201ENST00000303407 F13A1P00488 732 aa18.95■□□□□ 0.62
BRD3-201ENST00000303407 IQCEQ6IPM2 695 aa18.95■□□□□ 0.62
BRD3-201ENST00000303407 SOS1Q07889 1333 aaPredicted RBP18.94■□□□□ 0.62
BRD3-201ENST00000303407 RNF123Q5XPI4 1314 aa18.94■□□□□ 0.62
BRD3-201ENST00000303407 RNMTO43148 476 aaKnown RBP18.94■□□□□ 0.62
BRD3-201ENST00000303407 CASQ1P31415 396 aa18.94■□□□□ 0.62
BRD3-201ENST00000303407 CRACR2BQ8N4Y2 399 aaPredicted RBP18.94■□□□□ 0.62
BRD3-201ENST00000303407 ZFYP08048 801 aaPredicted RBP18.94■□□□□ 0.62
BRD3-201ENST00000303407 HCLS1P14317 486 aaPredicted RBP18.94■□□□□ 0.62
BRD3-201ENST00000303407 IL15P40933 162 aaPredicted RBP18.94■□□□□ 0.62
BRD3-201ENST00000303407 CHMLP26374 656 aa18.94■□□□□ 0.62
BRD3-201ENST00000303407 KDM5CP41229 1560 aa18.94■□□□□ 0.62
BRD3-201ENST00000303407 EIF3JO75822 258 aaKnown RBP18.94■□□□□ 0.62
BRD3-201ENST00000303407 SEPT11Q9NVA2 429 aaKnown RBP18.94■□□□□ 0.62
BRD3-201ENST00000303407 ATP10AO60312 1499 aa18.93■□□□□ 0.62
BRD3-201ENST00000303407 ZNF165P49910 485 aa18.93■□□□□ 0.62
BRD3-201ENST00000303407 UBXN4Q92575 508 aa18.93■□□□□ 0.62
BRD3-201ENST00000303407 CCDC194A0A1B0GVG4 234 aa18.93■□□□□ 0.62
BRD3-201ENST00000303407 CCDC152Q4G0S7 254 aa18.93■□□□□ 0.62
BRD3-201ENST00000303407 TMC6Q7Z403 805 aa18.93■□□□□ 0.62
BRD3-201ENST00000303407 XRCC6P12956 609 aaKnown RBP eCLIP18.93■□□□□ 0.62
BRD3-201ENST00000303407 AK2P54819 239 aa18.93■□□□□ 0.62
BRD3-201ENST00000303407 KIF18AQ8NI77 898 aa18.93■□□□□ 0.62
BRD3-201ENST00000303407 IP6K1Q92551 441 aa18.93■□□□□ 0.62
BRD3-201ENST00000303407 PAG1Q9NWQ8 432 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 186.2 ms