RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ASAP1Q9ULH1 1129 aa26.52■■□□□ 1.84
TPM4-201ENST00000300933 ISY1Q9ULR0 285 aaKnown RBP26.52■■□□□ 1.84
TPM4-201ENST00000300933 ERVV-2B6SEH9 535 aa26.52■■□□□ 1.84
TPM4-201ENST00000300933 PTH1RQ03431 593 aa26.51■■□□□ 1.83
TPM4-201ENST00000300933 LMBR1LQ6UX01 489 aa26.51■■□□□ 1.83
TPM4-201ENST00000300933 FAM227BQ96M60 508 aa26.51■■□□□ 1.83
TPM4-201ENST00000300933 LSG1Q9H089 658 aaKnown RBP26.51■■□□□ 1.83
TPM4-201ENST00000300933 PTPN12Q05209 780 aaKnown RBP26.5■■□□□ 1.83
TPM4-201ENST00000300933 TFCP2Q12800 502 aa26.5■■□□□ 1.83
TPM4-201ENST00000300933 GPATCH3Q96I76 525 aa26.5■■□□□ 1.83
TPM4-201ENST00000300933 USP42Q9H9J4 1324 aaKnown RBP26.5■■□□□ 1.83
TPM4-201ENST00000300933 HSPA4P34932 840 aa26.5■■□□□ 1.83
TPM4-201ENST00000300933 KIAA1211Q6ZU35 1233 aa26.49■■□□□ 1.83
TPM4-201ENST00000300933 TMOD3Q9NYL9 352 aa26.48■■□□□ 1.83
TPM4-201ENST00000300933 RFX5P48382 616 aaPredicted RBP26.48■■□□□ 1.83
TPM4-201ENST00000300933 BAG4O95429 457 aaKnown RBP26.47■■□□□ 1.83
TPM4-201ENST00000300933 CHGBP05060 677 aa26.47■■□□□ 1.83
TPM4-201ENST00000300933 NKX1-1Q15270 411 aaPredicted RBP26.47■■□□□ 1.83
TPM4-201ENST00000300933 SNX14Q9Y5W7 946 aa26.47■■□□□ 1.83
TPM4-201ENST00000300933 RAD50Q92878 1312 aa26.47■■□□□ 1.83
TPM4-201ENST00000300933 PIGBQ92521 554 aa26.47■■□□□ 1.83
TPM4-201ENST00000300933 ABCC6O95255 1503 aa26.46■■□□□ 1.83
TPM4-201ENST00000300933 ZDHHC9Q9Y397 364 aa26.46■■□□□ 1.83
TPM4-201ENST00000300933 CASP7P55210 303 aa26.46■■□□□ 1.83
TPM4-201ENST00000300933 MCTP1Q6DN14 999 aa26.46■■□□□ 1.83
TPM4-201ENST00000300933 SYTL4Q96C24 671 aaPredicted RBP26.46■■□□□ 1.83
TPM4-201ENST00000300933 CCDC85AQ96PX6 553 aaPredicted RBP26.46■■□□□ 1.83
TPM4-201ENST00000300933 SKOR2Q2VWA4 1001 aaPredicted RBP26.45■■□□□ 1.82
TPM4-201ENST00000300933 DNAJC10Q8IXB1 793 aa26.45■■□□□ 1.82
TPM4-201ENST00000300933 GLI3P10071 1580 aa26.45■■□□□ 1.82
TPM4-201ENST00000300933 A0A0G2JS52 829 aa26.44■■□□□ 1.82
TPM4-201ENST00000300933 ANAPC15P60006 121 aa26.44■■□□□ 1.82
TPM4-201ENST00000300933 ZNF594Q96JF6 807 aaPredicted RBP26.44■■□□□ 1.82
TPM4-201ENST00000300933 DBNLQ9UJU6 430 aaKnown RBP26.44■■□□□ 1.82
TPM4-201ENST00000300933 FOXD4L6Q3SYB3 417 aaPredicted RBP26.44■■□□□ 1.82
TPM4-201ENST00000300933 FOXD4L3Q6VB84 417 aaPredicted RBP26.44■■□□□ 1.82
TPM4-201ENST00000300933 EVI5LQ96CN4 794 aa26.44■■□□□ 1.82
TPM4-201ENST00000300933 NMIQ13287 307 aaPredicted RBP26.43■■□□□ 1.82
TPM4-201ENST00000300933 PRPF40BQ6NWY9 871 aaKnown RBP26.43■■□□□ 1.82
TPM4-201ENST00000300933 FSD1Q9BTV5 496 aa26.43■■□□□ 1.82
TPM4-201ENST00000300933 COPRSQ9NQ92 184 aa26.43■■□□□ 1.82
TPM4-201ENST00000300933 AFDNP55196 1824 aaKnown RBP26.43■■□□□ 1.82
TPM4-201ENST00000300933 FOXO4P98177 505 aa26.42■■□□□ 1.82
TPM4-201ENST00000300933 NASPP49321 788 aaPredicted RBP26.42■■□□□ 1.82
TPM4-201ENST00000300933 COL9A3Q14050 684 aaPredicted RBP26.42■■□□□ 1.82
TPM4-201ENST00000300933 ADCK5Q3MIX3 580 aa26.42■■□□□ 1.82
TPM4-201ENST00000300933 DBNDD2Q9BQY9 259 aa26.42■■□□□ 1.82
TPM4-201ENST00000300933 CWC25Q9NXE8 425 aaPredicted RBP26.42■■□□□ 1.82
TPM4-201ENST00000300933 PARP4Q9UKK3 1724 aaKnown RBP26.42■■□□□ 1.82
TPM4-201ENST00000300933 RABL6Q3YEC7 729 aaPredicted RBP26.42■■□□□ 1.82
TPM4-201ENST00000300933 A0A0D9SFI3 127 aa26.41■■□□□ 1.82
TPM4-201ENST00000300933 TNNI3KQ59H18 835 aa26.41■■□□□ 1.82
TPM4-201ENST00000300933 FPGT-TNNI3KV9GXZ4 949 aa26.41■■□□□ 1.82
TPM4-201ENST00000300933 ARFGEF2Q9Y6D5 1785 aa26.41■■□□□ 1.82
TPM4-201ENST00000300933 CYP2E1P05181 493 aaPredicted RBP26.41■■□□□ 1.82
TPM4-201ENST00000300933 NUCB2P80303 420 aa26.41■■□□□ 1.82
TPM4-201ENST00000300933 H7C1W4 665 aa26.4■■□□□ 1.82
TPM4-201ENST00000300933 KCPQ6ZWJ8 1503 aa26.4■■□□□ 1.82
TPM4-201ENST00000300933 ADAMTS2O95450 1211 aa26.4■■□□□ 1.82
TPM4-201ENST00000300933 DNAJC2Q99543 621 aaKnown RBP26.4■■□□□ 1.82
TPM4-201ENST00000300933 CWC22Q9HCG8 908 aaKnown RBP26.4■■□□□ 1.82
TPM4-201ENST00000300933 CASTP20810 708 aaKnown RBP26.39■■□□□ 1.82
TPM4-201ENST00000300933 NEUROD6Q96NK8 337 aa26.39■■□□□ 1.82
TPM4-201ENST00000300933 ATG3Q9NT62 314 aa26.39■■□□□ 1.82
TPM4-201ENST00000300933 DDX49Q9Y6V7 483 aaKnown RBP26.39■■□□□ 1.82
TPM4-201ENST00000300933 ABCA3Q99758 1704 aa26.39■■□□□ 1.82
TPM4-201ENST00000300933 TPM2P07951 284 aa26.39■■□□□ 1.81
TPM4-201ENST00000300933 TIMM10P62072 90 aa26.39■■□□□ 1.81
TPM4-201ENST00000300933 SYNE4Q8N205 404 aa26.39■■□□□ 1.81
TPM4-201ENST00000300933 RUFY2Q8WXA3 655 aa26.39■■□□□ 1.81
TPM4-201ENST00000300933 KCNJ4P48050 445 aa26.38■■□□□ 1.81
TPM4-201ENST00000300933 CCDC173Q0VFZ6 552 aa26.38■■□□□ 1.81
TPM4-201ENST00000300933 NCLP19338 710 aaKnown RBP26.37■■□□□ 1.81
TPM4-201ENST00000300933 AK2P54819 239 aa26.37■■□□□ 1.81
TPM4-201ENST00000300933 SLFNL1Q499Z3 407 aa26.37■■□□□ 1.81
TPM4-201ENST00000300933 LRRC24Q50LG9 513 aa26.37■■□□□ 1.81
TPM4-201ENST00000300933 ANP32BQ92688 251 aaKnown RBP26.36■■□□□ 1.81
TPM4-201ENST00000300933 FAM89AQ96GI7 184 aa26.36■■□□□ 1.81
TPM4-201ENST00000300933 JAKMIP1Q96N16 626 aaKnown RBP26.36■■□□□ 1.81
TPM4-201ENST00000300933 PUS3Q9BZE2 481 aaKnown RBP26.36■■□□□ 1.81
TPM4-201ENST00000300933 TAF6LQ9Y6J9 622 aa26.36■■□□□ 1.81
TPM4-201ENST00000300933 ZNF589Q86UQ0 364 aaPredicted RBP26.36■■□□□ 1.81
TPM4-201ENST00000300933 SHANK3Q9BYB0 1731 aa26.36■■□□□ 1.81
TPM4-201ENST00000300933 PLEKHG2Q9H7P9 1386 aa26.35■■□□□ 1.81
TPM4-201ENST00000300933 GOLGA6L22H0YM25 854 aa26.35■■□□□ 1.81
TPM4-201ENST00000300933 GPTP24298 496 aa26.35■■□□□ 1.81
TPM4-201ENST00000300933 MCM2P49736 904 aa26.35■■□□□ 1.81
TPM4-201ENST00000300933 DDX46Q7L014 1031 aaKnown RBP26.35■■□□□ 1.81
TPM4-201ENST00000300933 CUL4AQ13619 759 aa26.34■■□□□ 1.81
TPM4-201ENST00000300933 TCEANC2Q96MN5 208 aa26.34■■□□□ 1.81
TPM4-201ENST00000300933 RBM8AQ9Y5S9 174 aaKnown RBP26.34■■□□□ 1.81
TPM4-201ENST00000300933 PRPF40AO75400 957 aaKnown RBP26.34■■□□□ 1.81
TPM4-201ENST00000300933 ZSCAN30Q86W11 494 aa26.34■■□□□ 1.81
TPM4-201ENST00000300933 SLC4A9Q96Q91 983 aa26.34■■□□□ 1.81
TPM4-201ENST00000300933 CCDC171Q6TFL3 1326 aa26.34■■□□□ 1.81
TPM4-201ENST00000300933 RUFY3Q7L099 469 aa26.33■■□□□ 1.81
TPM4-201ENST00000300933 ATG9AQ7Z3C6 839 aa26.33■■□□□ 1.81
TPM4-201ENST00000300933 SEC62Q99442 399 aaKnown RBP26.33■■□□□ 1.81
TPM4-201ENST00000300933 LARGE1O95461 756 aa26.33■■□□□ 1.81
TPM4-201ENST00000300933 PTMSP20962 102 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms