RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 KDM5AP29375 1690 aaKnown RBP15.59■□□□□ 0.09
CASC4-201ENST00000299957 GOLGA8BA8MQT2 603 aa15.59■□□□□ 0.09
CASC4-201ENST00000299957 LIG1P18858 919 aa15.59■□□□□ 0.09
CASC4-201ENST00000299957 LRRFIP1Q32MZ4 808 aaKnown RBP15.59■□□□□ 0.09
CASC4-201ENST00000299957 FAM200AQ8TCP9 573 aa15.59■□□□□ 0.09
CASC4-201ENST00000299957 LARGE1O95461 756 aa15.59■□□□□ 0.09
CASC4-201ENST00000299957 ME3Q16798 604 aa15.59■□□□□ 0.09
CASC4-201ENST00000299957 POLR3GO15318 223 aaPredicted RBP15.59■□□□□ 0.09
CASC4-201ENST00000299957 TFCP2Q12800 502 aa15.59■□□□□ 0.09
CASC4-201ENST00000299957 RUFY3Q7L099 469 aa15.59■□□□□ 0.09
CASC4-201ENST00000299957 ABCF2Q9UG63 623 aa15.59■□□□□ 0.09
CASC4-201ENST00000299957 IQSEC3Q9UPP2 1182 aaPredicted RBP15.59■□□□□ 0.09
CASC4-201ENST00000299957 YEATS2Q9ULM3 1422 aa15.58■□□□□ 0.09
CASC4-201ENST00000299957 ERICH2A1L162 156 aa15.58■□□□□ 0.09
CASC4-201ENST00000299957 URI1O94763 535 aaPredicted RBP15.58■□□□□ 0.09
CASC4-201ENST00000299957 KRT32Q14532 448 aa15.58■□□□□ 0.09
CASC4-201ENST00000299957 PROSER3Q2NL68 480 aa15.58■□□□□ 0.09
CASC4-201ENST00000299957 CCDC34Q96HJ3 373 aa15.58■□□□□ 0.09
CASC4-201ENST00000299957 ZDHHC9Q9Y397 364 aa15.58■□□□□ 0.09
CASC4-201ENST00000299957 LTKP29376 864 aa15.58■□□□□ 0.08
CASC4-201ENST00000299957 LMOD1P29536 600 aaPredicted RBP15.58■□□□□ 0.08
CASC4-201ENST00000299957 INTS4Q96HW7 963 aaKnown RBP15.58■□□□□ 0.08
CASC4-201ENST00000299957 USP16Q9Y5T5 823 aa15.58■□□□□ 0.08
CASC4-201ENST00000299957 SBNO2Q9Y2G9 1366 aa15.58■□□□□ 0.08
CASC4-201ENST00000299957 DHX16O60231 1041 aaKnown RBP15.58■□□□□ 0.08
CASC4-201ENST00000299957 KSR2Q6VAB6 950 aa15.58■□□□□ 0.08
CASC4-201ENST00000299957 AOPEPQ8N6M6 819 aa15.58■□□□□ 0.08
CASC4-201ENST00000299957 DDX17Q92841 729 aaKnown RBP15.58■□□□□ 0.08
CASC4-201ENST00000299957 METP08581 1390 aa15.57■□□□□ 0.08
CASC4-201ENST00000299957 SKILP12757 684 aa15.57■□□□□ 0.08
CASC4-201ENST00000299957 SFPQP23246 707 aaKnown RBP eCLIP15.57■□□□□ 0.08
CASC4-201ENST00000299957 CGNQ9P2M7 1197 aaKnown RBP15.57■□□□□ 0.08
CASC4-201ENST00000299957 PPP1R9BQ96SB3 815 aa15.57■□□□□ 0.08
CASC4-201ENST00000299957 DBNDD2Q9BQY9 259 aa15.57■□□□□ 0.08
CASC4-201ENST00000299957 ORC3Q9UBD5 711 aaPredicted RBP15.57■□□□□ 0.08
CASC4-201ENST00000299957 CCDC171Q6TFL3 1326 aa15.57■□□□□ 0.08
CASC4-201ENST00000299957 A0A1B0GVL5 298 aa15.57■□□□□ 0.08
CASC4-201ENST00000299957 ZNF853P0CG23 659 aa15.57■□□□□ 0.08
CASC4-201ENST00000299957 U2AF2P26368 475 aaKnown RBP eCLIP15.57■□□□□ 0.084e-6■■■■□ 26.4
CASC4-201ENST00000299957 METTL24Q5JXM2 366 aa15.57■□□□□ 0.08
CASC4-201ENST00000299957 HYPKQ9NX55 129 aa15.57■□□□□ 0.08
CASC4-201ENST00000299957 PRR36Q9H6K5 1346 aa15.57■□□□□ 0.08
CASC4-201ENST00000299957 FLT4P35916 1363 aa15.56■□□□□ 0.08
CASC4-201ENST00000299957 HSPA4P34932 840 aa15.56■□□□□ 0.08
CASC4-201ENST00000299957 ANKLE2Q86XL3 938 aa15.56■□□□□ 0.08
CASC4-201ENST00000299957 SUCLG2Q96I99 432 aa15.56■□□□□ 0.08
CASC4-201ENST00000299957 ZNF594Q96JF6 807 aaPredicted RBP15.56■□□□□ 0.08
CASC4-201ENST00000299957 U3KPZ7 1027 aaPredicted RBP15.56■□□□□ 0.08
CASC4-201ENST00000299957 CLSTN1O94985 981 aa15.56■□□□□ 0.08
CASC4-201ENST00000299957 MCM5P33992 734 aa15.56■□□□□ 0.08
CASC4-201ENST00000299957 TLR7Q9NYK1 1049 aaKnown RBP15.56■□□□□ 0.08
CASC4-201ENST00000299957 RIOK3O14730 519 aaKnown RBP15.55■□□□□ 0.08
CASC4-201ENST00000299957 EAF2Q96CJ1 260 aaPredicted RBP15.55■□□□□ 0.08
CASC4-201ENST00000299957 ORAI2Q96SN7 254 aa15.55■□□□□ 0.08
CASC4-201ENST00000299957 DDX19AQ9NUU7 478 aaKnown RBP15.55■□□□□ 0.08
CASC4-201ENST00000299957 TBC1D2BQ9UPU7 963 aa15.55■□□□□ 0.08
CASC4-201ENST00000299957 RAD50Q92878 1312 aa15.55■□□□□ 0.08
CASC4-201ENST00000299957 MINDY4BA8MYZ0 360 aa15.55■□□□□ 0.08
CASC4-201ENST00000299957 A0A0D9SFI3 127 aa15.55■□□□□ 0.08
CASC4-201ENST00000299957 VPS53Q5VIR6 699 aa15.55■□□□□ 0.08
CASC4-201ENST00000299957 HELBQ8NG08 1087 aaPredicted RBP15.55■□□□□ 0.08
CASC4-201ENST00000299957 ZFYVE9O95405 1425 aa15.55■□□□□ 0.08
CASC4-201ENST00000299957 MARCH6O60337 910 aa15.54■□□□□ 0.08
CASC4-201ENST00000299957 IMMTQ16891 758 aaKnown RBP15.54■□□□□ 0.08
CASC4-201ENST00000299957 NRBP1Q9UHY1 535 aa15.54■□□□□ 0.08
CASC4-201ENST00000299957 ADCY10Q96PN6 1610 aa15.54■□□□□ 0.08
CASC4-201ENST00000299957 KLF18A0A0U1RQI7 1052 aa15.54■□□□□ 0.08
CASC4-201ENST00000299957 SLC27A2O14975 620 aa15.54■□□□□ 0.08
CASC4-201ENST00000299957 PTPN21Q16825 1174 aa15.54■□□□□ 0.08
CASC4-201ENST00000299957 SLFNL1Q499Z3 407 aa15.54■□□□□ 0.08
CASC4-201ENST00000299957 TPCN1Q9ULQ1 816 aa15.54■□□□□ 0.08
CASC4-201ENST00000299957 SAMD1Q6SPF0 538 aaPredicted RBP15.54■□□□□ 0.08
CASC4-201ENST00000299957 FTOQ9C0B1 505 aaKnown RBP eCLIP15.54■□□□□ 0.08
CASC4-201ENST00000299957 ANO10Q9NW15 660 aa15.54■□□□□ 0.08
CASC4-201ENST00000299957 KCNH5Q8NCM2 988 aa15.53■□□□□ 0.08
CASC4-201ENST00000299957 LINS1Q8NG48 757 aa15.53■□□□□ 0.08
CASC4-201ENST00000299957 TDO2P48775 406 aa15.53■□□□□ 0.08
CASC4-201ENST00000299957 TTC6Q86TZ1 520 aa15.53■□□□□ 0.08
CASC4-201ENST00000299957 SLC3A2P08195 630 aaKnown RBP15.53■□□□□ 0.08
CASC4-201ENST00000299957 TSR1Q2NL82 804 aaKnown RBP15.53■□□□□ 0.08
CASC4-201ENST00000299957 CEP135Q66GS9 1140 aa15.53■□□□□ 0.08
CASC4-201ENST00000299957 BICDL1Q6ZP65 573 aa15.53■□□□□ 0.08
CASC4-201ENST00000299957 PYCARDQ9ULZ3 195 aa15.53■□□□□ 0.08
CASC4-201ENST00000299957 UHRF1BP1LA0JNW5 1464 aa15.53■□□□□ 0.08
CASC4-201ENST00000299957 TPM1P09493 284 aa15.52■□□□□ 0.08
CASC4-201ENST00000299957 UVSSAQ2YD98 709 aa15.52■□□□□ 0.08
CASC4-201ENST00000299957 KIF18AQ8NI77 898 aa15.52■□□□□ 0.08
CASC4-201ENST00000299957 UBXN4Q92575 508 aa15.52■□□□□ 0.08
CASC4-201ENST00000299957 RNF216Q9NWF9 866 aaPredicted RBP15.52■□□□□ 0.08
CASC4-201ENST00000299957 TEX35Q5T0J7 233 aa15.52■□□□□ 0.08
CASC4-201ENST00000299957 KRT28Q7Z3Y7 464 aa15.52■□□□□ 0.08
CASC4-201ENST00000299957 MAP3K5Q99683 1374 aa15.52■□□□□ 0.08
CASC4-201ENST00000299957 AMOTQ4VCS5 1084 aa15.52■□□□□ 0.07
CASC4-201ENST00000299957 IL25Q9H293 177 aa15.52■□□□□ 0.07
CASC4-201ENST00000299957 CBX8Q9HC52 389 aa15.52■□□□□ 0.07
CASC4-201ENST00000299957 GCP02774 474 aa15.51■□□□□ 0.07
CASC4-201ENST00000299957 GOLGA6L1Q8N7Z2 621 aa15.51■□□□□ 0.07
CASC4-201ENST00000299957 ARGLU1Q9NWB6 273 aaPredicted RBP15.51■□□□□ 0.07
CASC4-201ENST00000299957 EDC4Q6P2E9 1401 aaKnown RBP15.51■□□□□ 0.07
CASC4-201ENST00000299957 TNRQ92752 1358 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms