RNA–Protein interactions for RNA: ENST00000299752.8

CDH16-201, Transcript of cadherin 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH16, Length 2,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-201ENST00000299752 KIF1BPQ96EK5 621 aa17.42■□□□□ 0.38
CDH16-201ENST00000299752 MYH14Q7Z406 1995 aaKnown RBP17.41■□□□□ 0.38
CDH16-201ENST00000299752 TCIRG1Q13488 830 aa17.41■□□□□ 0.38
CDH16-201ENST00000299752 MAP3K15Q6ZN16 1313 aa17.41■□□□□ 0.38
CDH16-201ENST00000299752 NUP188Q5SRE5 1749 aa17.41■□□□□ 0.38
CDH16-201ENST00000299752 LMBR1LQ6UX01 489 aa17.41■□□□□ 0.38
CDH16-201ENST00000299752 THSD7AQ9UPZ6 1657 aa17.41■□□□□ 0.38
CDH16-201ENST00000299752 HSP90AB4PQ58FF6 505 aa17.4■□□□□ 0.38
CDH16-201ENST00000299752 SMARCC1Q92922 1105 aaPredicted RBP17.4■□□□□ 0.38
CDH16-201ENST00000299752 CASP7P55210 303 aa17.39■□□□□ 0.37
CDH16-201ENST00000299752 BECN1Q14457 450 aa17.39■□□□□ 0.37
CDH16-201ENST00000299752 MAP4K4O95819 1239 aaPredicted RBP17.39■□□□□ 0.37
CDH16-201ENST00000299752 RBM25P49756 843 aaKnown RBP17.39■□□□□ 0.37
CDH16-201ENST00000299752 STAP2Q9UGK3 403 aa17.39■□□□□ 0.37
CDH16-201ENST00000299752 IL6STP40189 918 aaPredicted RBP17.38■□□□□ 0.37
CDH16-201ENST00000299752 GIGYF2Q6Y7W6 1299 aaKnown RBP17.38■□□□□ 0.37
CDH16-201ENST00000299752 H7C1W4 665 aa17.38■□□□□ 0.37
CDH16-201ENST00000299752 EIF5P55010 431 aaKnown RBP17.38■□□□□ 0.37
CDH16-201ENST00000299752 CCDC191Q8NCU4 936 aa17.38■□□□□ 0.37
CDH16-201ENST00000299752 ISCA1Q9BUE6 129 aa17.38■□□□□ 0.37
CDH16-201ENST00000299752 CASC1Q6TDU7 716 aa17.37■□□□□ 0.37
CDH16-201ENST00000299752 ZNF594Q96JF6 807 aaPredicted RBP17.37■□□□□ 0.37
CDH16-201ENST00000299752 BTAF1O14981 1849 aa17.37■□□□□ 0.37
CDH16-201ENST00000299752 TRIM37O94972 964 aa17.37■□□□□ 0.37
CDH16-201ENST00000299752 CCNL1Q9UK58 526 aaPredicted RBP17.37■□□□□ 0.37
CDH16-201ENST00000299752 TRIM6-TRIM34B2RNG4 842 aa17.37■□□□□ 0.37
CDH16-201ENST00000299752 FOXO4P98177 505 aa17.37■□□□□ 0.37
CDH16-201ENST00000299752 ONECUT3O60422 494 aaPredicted RBP17.36■□□□□ 0.37
CDH16-201ENST00000299752 RILPL2Q969X0 211 aa17.36■□□□□ 0.37
CDH16-201ENST00000299752 TBC1D2Q9BYX2 928 aa17.36■□□□□ 0.37
CDH16-201ENST00000299752 G3BP1Q13283 466 aaKnown RBP eCLIP17.36■□□□□ 0.37
CDH16-201ENST00000299752 NBR1Q14596 966 aa17.36■□□□□ 0.37
CDH16-201ENST00000299752 AMIGO3Q86WK7 504 aa17.36■□□□□ 0.37
CDH16-201ENST00000299752 BICDL1Q6ZP65 573 aa17.35■□□□□ 0.37
CDH16-201ENST00000299752 NLRP10Q86W26 655 aa17.35■□□□□ 0.37
CDH16-201ENST00000299752 UBN2Q6ZU65 1347 aa17.35■□□□□ 0.37
CDH16-201ENST00000299752 SASH1O94885 1247 aa17.35■□□□□ 0.37
CDH16-201ENST00000299752 KRT27Q7Z3Y8 459 aa17.35■□□□□ 0.37
CDH16-201ENST00000299752 CLASRPQ8N2M8 674 aaKnown RBP17.35■□□□□ 0.37
CDH16-201ENST00000299752 CCDC8Q9H0W5 538 aaPredicted RBP17.35■□□□□ 0.37
CDH16-201ENST00000299752 TRMT112Q9UI30 125 aaKnown RBP17.35■□□□□ 0.37
CDH16-201ENST00000299752 PHF14O94880 888 aa17.34■□□□□ 0.37
CDH16-201ENST00000299752 ERC1Q8IUD2 1116 aa17.34■□□□□ 0.37
CDH16-201ENST00000299752 BRWD3Q6RI45 1802 aa17.34■□□□□ 0.37
CDH16-201ENST00000299752 GNPATO15228 680 aa17.34■□□□□ 0.37
CDH16-201ENST00000299752 PTPN12Q05209 780 aaKnown RBP17.34■□□□□ 0.37
CDH16-201ENST00000299752 AACSQ86V21 672 aa17.33■□□□□ 0.37
CDH16-201ENST00000299752 TLR7Q9NYK1 1049 aaKnown RBP17.33■□□□□ 0.37
CDH16-201ENST00000299752 NUP98P52948 1817 aa17.33■□□□□ 0.36
CDH16-201ENST00000299752 AOX1Q06278 1338 aa17.33■□□□□ 0.36
CDH16-201ENST00000299752 RFX5P48382 616 aaPredicted RBP17.33■□□□□ 0.36
CDH16-201ENST00000299752 PI4K2BQ8TCG2 481 aa17.33■□□□□ 0.36
CDH16-201ENST00000299752 SRP68Q9UHB9 627 aaKnown RBP17.33■□□□□ 0.36
CDH16-201ENST00000299752 TUBGCP6Q96RT7 1819 aa17.33■□□□□ 0.36
CDH16-201ENST00000299752 CAMTA2O94983 1202 aa17.32■□□□□ 0.36
CDH16-201ENST00000299752 KIF2CQ99661 725 aa17.32■□□□□ 0.36
CDH16-201ENST00000299752 COL15A1P39059 1388 aa17.32■□□□□ 0.36
CDH16-201ENST00000299752 EIF5BO60841 1220 aaKnown RBP17.32■□□□□ 0.36
CDH16-201ENST00000299752 HCLS1P14317 486 aaPredicted RBP17.31■□□□□ 0.36
CDH16-201ENST00000299752 RABL6Q3YEC7 729 aaPredicted RBP17.31■□□□□ 0.36
CDH16-201ENST00000299752 TFCP2Q12800 502 aa17.31■□□□□ 0.36
CDH16-201ENST00000299752 SUSD4Q5VX71 490 aa17.31■□□□□ 0.36
CDH16-201ENST00000299752 USP26Q9BXU7 913 aa17.31■□□□□ 0.36
CDH16-201ENST00000299752 PUS3Q9BZE2 481 aaKnown RBP17.31■□□□□ 0.36
CDH16-201ENST00000299752 LRRC4BQ9NT99 713 aa17.31■□□□□ 0.36
CDH16-201ENST00000299752 NIP7Q9Y221 180 aaKnown RBP eCLIP17.31■□□□□ 0.36
CDH16-201ENST00000299752 SBF2Q86WG5 1849 aa17.31■□□□□ 0.36
CDH16-201ENST00000299752 IFIT2P09913 472 aaKnown RBP17.31■□□□□ 0.36
CDH16-201ENST00000299752 LRRC24Q50LG9 513 aa17.31■□□□□ 0.36
CDH16-201ENST00000299752 ZBTB38Q8NAP3 1195 aaPredicted RBP17.31■□□□□ 0.36
CDH16-201ENST00000299752 EAF2Q96CJ1 260 aaPredicted RBP17.31■□□□□ 0.36
CDH16-201ENST00000299752 ERC2O15083 957 aa17.3■□□□□ 0.36
CDH16-201ENST00000299752 CCDC24Q8N4L8 307 aa17.3■□□□□ 0.36
CDH16-201ENST00000299752 PCCAP05165 728 aaPredicted RBP17.3■□□□□ 0.36
CDH16-201ENST00000299752 NHSQ6T4R5 1651 aa17.3■□□□□ 0.36
CDH16-201ENST00000299752 IRS4O14654 1257 aaPredicted RBP17.29■□□□□ 0.36
CDH16-201ENST00000299752 ERVV-1B6SEH8 477 aa17.29■□□□□ 0.36
CDH16-201ENST00000299752 REC8O95072 547 aa17.29■□□□□ 0.36
CDH16-201ENST00000299752 CHMLP26374 656 aa17.29■□□□□ 0.36
CDH16-201ENST00000299752 RBM6P78332 1123 aaKnown RBP17.29■□□□□ 0.36
CDH16-201ENST00000299752 HSP90AB3PQ58FF7 597 aa17.29■□□□□ 0.36
CDH16-201ENST00000299752 SPRYD3Q8NCJ5 442 aa17.29■□□□□ 0.36
CDH16-201ENST00000299752 SLKQ9H2G2 1235 aaPredicted RBP17.29■□□□□ 0.36
CDH16-201ENST00000299752 COPRSQ9NQ92 184 aa17.29■□□□□ 0.36
CDH16-201ENST00000299752 TRIM28Q13263 835 aaKnown RBP17.28■□□□□ 0.36
CDH16-201ENST00000299752 ZNF772Q68DY9 489 aaPredicted RBP17.28■□□□□ 0.36
CDH16-201ENST00000299752 ZNF34Q8IZ26 560 aa17.28■□□□□ 0.36
CDH16-201ENST00000299752 USPL1Q5W0Q7 1092 aa17.28■□□□□ 0.36
CDH16-201ENST00000299752 BCL11BQ9C0K0 894 aaPredicted RBP17.28■□□□□ 0.36
CDH16-201ENST00000299752 TTC41PQ6P2S7 1318 aa17.28■□□□□ 0.36
CDH16-201ENST00000299752 ESYT1Q9BSJ8 1104 aa17.28■□□□□ 0.36
CDH16-201ENST00000299752 GREM2Q9H772 168 aa17.28■□□□□ 0.36
CDH16-201ENST00000299752 ECHDC1Q9NTX5 307 aa17.28■□□□□ 0.36
CDH16-201ENST00000299752 NDUFB9Q9Y6M9 179 aa17.28■□□□□ 0.36
CDH16-201ENST00000299752 USP42Q9H9J4 1324 aaKnown RBP17.28■□□□□ 0.36
CDH16-201ENST00000299752 COL5A3P25940 1745 aaPredicted RBP17.27■□□□□ 0.36
CDH16-201ENST00000299752 GLRX3O76003 335 aaKnown RBP17.27■□□□□ 0.36
CDH16-201ENST00000299752 FAM196AQ6ZSG2 479 aa17.27■□□□□ 0.36
CDH16-201ENST00000299752 HSCBQ8IWL3 235 aa17.27■□□□□ 0.36
CDH16-201ENST00000299752 CCDC57Q2TAC2 916 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms