RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 ANKRD62A6NC57 917 aa19.03■□□□□ 0.64
SNAPC4-201ENST00000298532 SSBP05455 408 aaKnown RBP eCLIP19.03■□□□□ 0.64
SNAPC4-201ENST00000298532 MAP2K1Q02750 393 aaPredicted RBP19.03■□□□□ 0.64
SNAPC4-201ENST00000298532 ANO6Q4KMQ2 910 aa19.03■□□□□ 0.64
SNAPC4-201ENST00000298532 TMX1Q9H3N1 280 aa19.03■□□□□ 0.64
SNAPC4-201ENST00000298532 ZPR1O75312 459 aa19.02■□□□□ 0.64
SNAPC4-201ENST00000298532 IVLP07476 585 aa19.02■□□□□ 0.64
SNAPC4-201ENST00000298532 CFAP43Q8NDM7 1665 aa19.02■□□□□ 0.64
SNAPC4-201ENST00000298532 IDH1O75874 414 aaKnown RBP19.02■□□□□ 0.64
SNAPC4-201ENST00000298532 DYDC1Q8WWB3 177 aa19.02■□□□□ 0.64
SNAPC4-201ENST00000298532 SRRTQ9BXP5 876 aaKnown RBP19.02■□□□□ 0.63
SNAPC4-201ENST00000298532 TAF7Q15545 349 aaPredicted RBP19.01■□□□□ 0.63
SNAPC4-201ENST00000298532 LARP1Q6PKG0 1096 aaKnown RBP19.01■□□□□ 0.63
SNAPC4-201ENST00000298532 IFNL2Q8IZJ0 200 aa19.01■□□□□ 0.63
SNAPC4-201ENST00000298532 MPHOSPH8Q99549 860 aa19.01■□□□□ 0.63
SNAPC4-201ENST00000298532 FEZ1Q99689 392 aa19.01■□□□□ 0.63
SNAPC4-201ENST00000298532 HMG20BQ9P0W2 317 aa19.01■□□□□ 0.63
SNAPC4-201ENST00000298532 ANKRD36BQ8N2N9 1353 aa19.01■□□□□ 0.63
SNAPC4-201ENST00000298532 EZRP15311 586 aaKnown RBP19.01■□□□□ 0.63
SNAPC4-201ENST00000298532 CCDC8Q9H0W5 538 aaPredicted RBP19.01■□□□□ 0.63
SNAPC4-201ENST00000298532 SEPT11Q9NVA2 429 aaKnown RBP19.01■□□□□ 0.63
SNAPC4-201ENST00000298532 SAMD9Q5K651 1589 aa19.01■□□□□ 0.63
SNAPC4-201ENST00000298532 TRPM2O94759 1503 aa19.01■□□□□ 0.63
SNAPC4-201ENST00000298532 DNAAF4Q8WXU2 420 aa19.01■□□□□ 0.63
SNAPC4-201ENST00000298532 GPATCH11Q8N954 259 aa19■□□□□ 0.63
SNAPC4-201ENST00000298532 CCT2P78371 535 aaKnown RBP19■□□□□ 0.63
SNAPC4-201ENST00000298532 FLIIQ13045 1269 aa19■□□□□ 0.63
SNAPC4-201ENST00000298532 CACNA2D4Q7Z3S7 1137 aa19■□□□□ 0.63
SNAPC4-201ENST00000298532 AKAP2Q9Y2D5 859 aa19■□□□□ 0.63
SNAPC4-201ENST00000298532 PARD3Q8TEW0 1356 aa19■□□□□ 0.63
SNAPC4-201ENST00000298532 IFFO1Q0D2I5 559 aa19■□□□□ 0.63
SNAPC4-201ENST00000298532 NAA15Q9BXJ9 866 aaKnown RBP19■□□□□ 0.63
SNAPC4-201ENST00000298532 GOLGA8BA8MQT2 603 aa18.99■□□□□ 0.63
SNAPC4-201ENST00000298532 IFIT1P09914 478 aaKnown RBP18.99■□□□□ 0.63
SNAPC4-201ENST00000298532 DNAJC5Q9H3Z4 198 aa18.99■□□□□ 0.63
SNAPC4-201ENST00000298532 DNAI1Q9UI46 699 aa18.99■□□□□ 0.63
SNAPC4-201ENST00000298532 IBSPP21815 317 aaPredicted RBP18.99■□□□□ 0.63
SNAPC4-201ENST00000298532 BBXQ8WY36 941 aaPredicted RBP18.99■□□□□ 0.63
SNAPC4-201ENST00000298532 GBP2P32456 591 aaPredicted RBP18.99■□□□□ 0.63
SNAPC4-201ENST00000298532 ESYT1Q9BSJ8 1104 aa18.99■□□□□ 0.63
SNAPC4-201ENST00000298532 ZSWIM4Q9H7M6 989 aa18.99■□□□□ 0.63
SNAPC4-201ENST00000298532 F13A1P00488 732 aa18.98■□□□□ 0.63
SNAPC4-201ENST00000298532 CCDC102BQ68D86 513 aa18.98■□□□□ 0.63
SNAPC4-201ENST00000298532 IPO4Q8TEX9 1081 aaKnown RBP18.98■□□□□ 0.63
SNAPC4-201ENST00000298532 MNAT1P51948 309 aa18.98■□□□□ 0.63
SNAPC4-201ENST00000298532 OGFRQ9NZT2 677 aa18.98■□□□□ 0.63
SNAPC4-201ENST00000298532 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.98■□□□□ 0.63
SNAPC4-201ENST00000298532 RALGAPBQ86X10 1494 aa18.98■□□□□ 0.63
SNAPC4-201ENST00000298532 NEK1Q96PY6 1258 aa18.98■□□□□ 0.63
SNAPC4-201ENST00000298532 MBIPQ9NS73 344 aa18.98■□□□□ 0.63
SNAPC4-201ENST00000298532 DACT1Q9NYF0 836 aa18.98■□□□□ 0.63
SNAPC4-201ENST00000298532 ALS2CR12Q96Q35 445 aa18.98■□□□□ 0.63
SNAPC4-201ENST00000298532 A0A087WZG4 1122 aa18.97■□□□□ 0.63
SNAPC4-201ENST00000298532 PDE1AP54750 535 aa18.97■□□□□ 0.63
SNAPC4-201ENST00000298532 SEC24BO95487 1268 aa18.97■□□□□ 0.63
SNAPC4-201ENST00000298532 FGFR1OPO95684 399 aaKnown RBP18.97■□□□□ 0.63
SNAPC4-201ENST00000298532 UBASH3AP57075 661 aa18.97■□□□□ 0.63
SNAPC4-201ENST00000298532 TSHZ3Q63HK5 1081 aa18.97■□□□□ 0.63
SNAPC4-201ENST00000298532 VPS36Q86VN1 386 aa18.97■□□□□ 0.63
SNAPC4-201ENST00000298532 CCDC113Q9H0I3 377 aa18.97■□□□□ 0.63
SNAPC4-201ENST00000298532 KANK3Q6NY19 840 aa18.97■□□□□ 0.63
SNAPC4-201ENST00000298532 ANKRD44Q8N8A2 993 aa18.96■□□□□ 0.63
SNAPC4-201ENST00000298532 EHBP1Q8NDI1 1231 aa18.96■□□□□ 0.63
SNAPC4-201ENST00000298532 ANKRD24Q8TF21 1146 aa18.96■□□□□ 0.63
SNAPC4-201ENST00000298532 LRP2BPQ9P2M1 347 aa18.96■□□□□ 0.63
SNAPC4-201ENST00000298532 ZNF213O14771 459 aa18.96■□□□□ 0.63
SNAPC4-201ENST00000298532 CCDC175P0C221 793 aa18.96■□□□□ 0.63
SNAPC4-201ENST00000298532 EMILIN1Q9Y6C2 1016 aa18.96■□□□□ 0.63
SNAPC4-201ENST00000298532 GTF2A1P52655 376 aaPredicted RBP18.96■□□□□ 0.63
SNAPC4-201ENST00000298532 SMC1AQ14683 1233 aaKnown RBP18.96■□□□□ 0.63
SNAPC4-201ENST00000298532 TERF1P54274 439 aa18.96■□□□□ 0.63
SNAPC4-201ENST00000298532 TSG101Q99816 390 aa18.95■□□□□ 0.62
SNAPC4-201ENST00000298532 ORC3Q9UBD5 711 aaPredicted RBP18.95■□□□□ 0.62
SNAPC4-201ENST00000298532 SLC12A7Q9Y666 1083 aa18.95■□□□□ 0.62
SNAPC4-201ENST00000298532 TYRO3Q06418 890 aa18.95■□□□□ 0.62
SNAPC4-201ENST00000298532 DNAJC25Q9H1X3 360 aa18.95■□□□□ 0.62
SNAPC4-201ENST00000298532 USP16Q9Y5T5 823 aa18.95■□□□□ 0.62
SNAPC4-201ENST00000298532 SSRP1Q08945 709 aaKnown RBP18.95■□□□□ 0.62
SNAPC4-201ENST00000298532 SPECC1Q5M775 1068 aa18.95■□□□□ 0.62
SNAPC4-201ENST00000298532 CCDC178Q5BJE1 867 aa18.95■□□□□ 0.62
SNAPC4-201ENST00000298532 NAPBQ9H115 298 aa18.95■□□□□ 0.62
SNAPC4-201ENST00000298532 ADGRL2O95490 1459 aa18.95■□□□□ 0.62
SNAPC4-201ENST00000298532 EIF2AK4Q9P2K8 1649 aaKnown RBP18.94■□□□□ 0.62
SNAPC4-201ENST00000298532 CTAGE15A4D2H0 777 aa18.94■□□□□ 0.62
SNAPC4-201ENST00000298532 CTAGE8P0CG41 777 aa18.94■□□□□ 0.62
SNAPC4-201ENST00000298532 CTAGE6Q86UF2 777 aa18.94■□□□□ 0.62
SNAPC4-201ENST00000298532 CTAGE4Q8IX94 777 aa18.94■□□□□ 0.62
SNAPC4-201ENST00000298532 INTS4Q96HW7 963 aaKnown RBP18.94■□□□□ 0.62
SNAPC4-201ENST00000298532 CDCA7Q9BWT1 371 aaPredicted RBP18.94■□□□□ 0.62
SNAPC4-201ENST00000298532 GOLGA8AA7E2F4 631 aa18.94■□□□□ 0.62
SNAPC4-201ENST00000298532 HLTFQ14527 1009 aaKnown RBP eCLIP18.94■□□□□ 0.62
SNAPC4-201ENST00000298532 NECAB1Q8N987 351 aa18.94■□□□□ 0.62
SNAPC4-201ENST00000298532 GCOM1H8Y6P7 765 aaPredicted RBP18.94■□□□□ 0.62
SNAPC4-201ENST00000298532 PPP1R12BO60237 982 aaPredicted RBP18.94■□□□□ 0.62
SNAPC4-201ENST00000298532 MYZAPP0CAP1 466 aa18.94■□□□□ 0.62
SNAPC4-201ENST00000298532 DNM1Q05193 864 aaKnown RBP18.94■□□□□ 0.62
SNAPC4-201ENST00000298532 PIBF1Q8WXW3 757 aa18.94■□□□□ 0.62
SNAPC4-201ENST00000298532 BCCIPQ9P287 314 aaKnown RBP eCLIP18.94■□□□□ 0.62
SNAPC4-201ENST00000298532 IGHMBP2P38935 993 aaKnown RBP18.94■□□□□ 0.62
SNAPC4-201ENST00000298532 PPP1R42Q7Z4L9 355 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms