RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 ANKRD18BA2A2Z9 1011 aa17.85■□□□□ 0.45
FNDC1-201ENST00000297267 HLTFQ14527 1009 aaKnown RBP eCLIP17.85■□□□□ 0.45
FNDC1-201ENST00000297267 RPGRQ92834 1020 aaKnown RBP17.85■□□□□ 0.45
FNDC1-201ENST00000297267 DNAJC25Q9H1X3 360 aa17.85■□□□□ 0.45
FNDC1-201ENST00000297267 JAKMIP3Q5VZ66 844 aa17.85■□□□□ 0.45
FNDC1-201ENST00000297267 MIGA1Q8NAN2 632 aa17.85■□□□□ 0.45
FNDC1-201ENST00000297267 RLBP1P12271 317 aa17.85■□□□□ 0.45
FNDC1-201ENST00000297267 LMAN1P49257 510 aa17.85■□□□□ 0.45
FNDC1-201ENST00000297267 WASF1Q92558 559 aa17.85■□□□□ 0.45
FNDC1-201ENST00000297267 NEK1Q96PY6 1258 aa17.85■□□□□ 0.45
FNDC1-201ENST00000297267 DPH6Q7L8W6 267 aa17.84■□□□□ 0.45
FNDC1-201ENST00000297267 BRF1Q92994 677 aa17.84■□□□□ 0.45
FNDC1-201ENST00000297267 AKAP2Q9Y2D5 859 aa17.84■□□□□ 0.45
FNDC1-201ENST00000297267 ERCC3P19447 782 aa17.84■□□□□ 0.45
FNDC1-201ENST00000297267 SF3A3Q12874 501 aaKnown RBP eCLIP17.84■□□□□ 0.45
FNDC1-201ENST00000297267 PRXQ9BXM0 1461 aa17.84■□□□□ 0.45
FNDC1-201ENST00000297267 LDHAL6AQ6ZMR3 332 aa17.84■□□□□ 0.45
FNDC1-201ENST00000297267 PUS7Q96PZ0 661 aaKnown RBP17.84■□□□□ 0.45
FNDC1-201ENST00000297267 KIF18AQ8NI77 898 aa17.84■□□□□ 0.45
FNDC1-201ENST00000297267 MAP3K12Q12852 859 aa17.84■□□□□ 0.45
FNDC1-201ENST00000297267 AOPEPQ8N6M6 819 aa17.84■□□□□ 0.45
FNDC1-201ENST00000297267 ORC3Q9UBD5 711 aaPredicted RBP17.84■□□□□ 0.45
FNDC1-201ENST00000297267 TSPY2A6NKD2 308 aa17.83■□□□□ 0.45
FNDC1-201ENST00000297267 STX17P56962 302 aa17.83■□□□□ 0.45
FNDC1-201ENST00000297267 SNW1Q13573 536 aaKnown RBP17.83■□□□□ 0.45
FNDC1-201ENST00000297267 KARSQ15046 597 aaKnown RBP17.83■□□□□ 0.45
FNDC1-201ENST00000297267 CWF19L2Q2TBE0 894 aaKnown RBP17.83■□□□□ 0.45
FNDC1-201ENST00000297267 CCDC129Q6ZRS4 1044 aa17.83■□□□□ 0.45
FNDC1-201ENST00000297267 MAATS1Q7Z4T9 603 aa17.83■□□□□ 0.45
FNDC1-201ENST00000297267 C17orf53Q8N3J3 647 aaPredicted RBP17.83■□□□□ 0.45
FNDC1-201ENST00000297267 ATAD2Q6PL18 1390 aa17.83■□□□□ 0.45
FNDC1-201ENST00000297267 TSG101Q99816 390 aa17.83■□□□□ 0.44
FNDC1-201ENST00000297267 PAIP2Q9BPZ3 127 aaKnown RBP17.83■□□□□ 0.44
FNDC1-201ENST00000297267 GSTTP1A0A1W2PQM5 241 aa17.83■□□□□ 0.44
FNDC1-201ENST00000297267 SMIM23A6NLE4 172 aa17.83■□□□□ 0.44
FNDC1-201ENST00000297267 KLF18A0A0U1RQI7 1052 aa17.83■□□□□ 0.44
FNDC1-201ENST00000297267 CTCFLQ8NI51 663 aaPredicted RBP17.83■□□□□ 0.44
FNDC1-201ENST00000297267 PRIM1P49642 420 aaKnown RBP17.82■□□□□ 0.44
FNDC1-201ENST00000297267 HEATR3Q7Z4Q2 680 aa17.82■□□□□ 0.44
FNDC1-201ENST00000297267 CCDC12Q8WUD4 166 aaPredicted RBP17.82■□□□□ 0.44
FNDC1-201ENST00000297267 ANKRD24Q8TF21 1146 aa17.82■□□□□ 0.44
FNDC1-201ENST00000297267 WASLO00401 505 aaPredicted RBP17.82■□□□□ 0.44
FNDC1-201ENST00000297267 NUCB1Q02818 461 aa17.82■□□□□ 0.44
FNDC1-201ENST00000297267 APOBRQ0VD83 1088 aa17.82■□□□□ 0.44
FNDC1-201ENST00000297267 DNAJC21Q5F1R6 531 aaKnown RBP17.82■□□□□ 0.44
FNDC1-201ENST00000297267 CATIPQ7Z7H3 387 aa17.82■□□□□ 0.44
FNDC1-201ENST00000297267 EVI5LQ96CN4 794 aa17.82■□□□□ 0.44
FNDC1-201ENST00000297267 TBC1D32Q96NH3 1257 aa17.82■□□□□ 0.44
FNDC1-201ENST00000297267 IDI1Q13907 227 aa17.82■□□□□ 0.44
FNDC1-201ENST00000297267 ALDH1L2Q3SY69 923 aa17.82■□□□□ 0.44
FNDC1-201ENST00000297267 ZBTB21Q9ULJ3 1066 aa17.82■□□□□ 0.44
FNDC1-201ENST00000297267 KRT28Q7Z3Y7 464 aa17.82■□□□□ 0.44
FNDC1-201ENST00000297267 CIZ1Q9ULV3 898 aaPredicted RBP17.82■□□□□ 0.44
FNDC1-201ENST00000297267 ACEP12821 1306 aa17.81■□□□□ 0.44
FNDC1-201ENST00000297267 CCDC194A0A1B0GVG4 234 aa17.81■□□□□ 0.44
FNDC1-201ENST00000297267 NMIQ13287 307 aaPredicted RBP17.81■□□□□ 0.44
FNDC1-201ENST00000297267 LUC7LQ9NQ29 371 aaKnown RBP17.81■□□□□ 0.44
FNDC1-201ENST00000297267 PRC1O43663 620 aa17.81■□□□□ 0.44
FNDC1-201ENST00000297267 RRP9O43818 475 aaKnown RBP17.81■□□□□ 0.44
FNDC1-201ENST00000297267 STX1AQ16623 288 aa17.81■□□□□ 0.44
FNDC1-201ENST00000297267 CCDC40Q4G0X9 1142 aa17.81■□□□□ 0.44
FNDC1-201ENST00000297267 RABEP2Q9H5N1 569 aa17.8■□□□□ 0.44
FNDC1-201ENST00000297267 C8orf34Q49A92 452 aa17.8■□□□□ 0.44
FNDC1-201ENST00000297267 SPECC1Q5M775 1068 aa17.8■□□□□ 0.44
FNDC1-201ENST00000297267 CCDC24Q8N4L8 307 aa17.8■□□□□ 0.44
FNDC1-201ENST00000297267 KIF14Q15058 1648 aa17.8■□□□□ 0.44
FNDC1-201ENST00000297267 CTR9Q6PD62 1173 aa17.8■□□□□ 0.44
FNDC1-201ENST00000297267 ANAPC15P60006 121 aa17.8■□□□□ 0.44
FNDC1-201ENST00000297267 RRAGBQ5VZM2 374 aa17.8■□□□□ 0.44
FNDC1-201ENST00000297267 ZNF165P49910 485 aa17.79■□□□□ 0.44
FNDC1-201ENST00000297267 GNG11P61952 73 aa17.79■□□□□ 0.44
FNDC1-201ENST00000297267 MFSD6Q6ZSS7 791 aa17.79■□□□□ 0.44
FNDC1-201ENST00000297267 XAGE3Q8WTP9 111 aa17.79■□□□□ 0.44
FNDC1-201ENST00000297267 SLC4A4Q9Y6R1 1079 aa17.79■□□□□ 0.44
FNDC1-201ENST00000297267 XRCC6P12956 609 aaKnown RBP eCLIP17.79■□□□□ 0.44
FNDC1-201ENST00000297267 RBM8AQ9Y5S9 174 aaKnown RBP17.79■□□□□ 0.44
FNDC1-201ENST00000297267 MRC2Q9UBG0 1479 aa17.79■□□□□ 0.44
FNDC1-201ENST00000297267 PLCD3Q8N3E9 789 aa17.79■□□□□ 0.44
FNDC1-201ENST00000297267 STX8Q9UNK0 236 aa17.79■□□□□ 0.44
FNDC1-201ENST00000297267 RIMBP2O15034 1052 aa17.79■□□□□ 0.44
FNDC1-201ENST00000297267 CA8P35219 290 aa17.79■□□□□ 0.44
FNDC1-201ENST00000297267 IARSP41252 1262 aaKnown RBP17.79■□□□□ 0.44
FNDC1-201ENST00000297267 OTUD7AQ8TE49 926 aaPredicted RBP17.79■□□□□ 0.44
FNDC1-201ENST00000297267 KAT14Q9H8E8 782 aa17.79■□□□□ 0.44
FNDC1-201ENST00000297267 CWC25Q9NXE8 425 aaPredicted RBP17.79■□□□□ 0.44
FNDC1-201ENST00000297267 EFCAB5A4FU69 1503 aa17.79■□□□□ 0.44
FNDC1-201ENST00000297267 IQCA1Q86XH1 822 aa17.78■□□□□ 0.44
FNDC1-201ENST00000297267 SYCP3Q8IZU3 236 aa17.78■□□□□ 0.44
FNDC1-201ENST00000297267 DHX58Q96C10 678 aa17.78■□□□□ 0.44
FNDC1-201ENST00000297267 KLHDC4Q8TBB5 520 aa17.78■□□□□ 0.44
FNDC1-201ENST00000297267 PKD2L1Q9P0L9 805 aa17.78■□□□□ 0.44
FNDC1-201ENST00000297267 PHF8Q9UPP1 1060 aa17.78■□□□□ 0.44
FNDC1-201ENST00000297267 CCDC186Q7Z3E2 898 aa17.78■□□□□ 0.44
FNDC1-201ENST00000297267 ZSCAN22P10073 491 aaPredicted RBP17.77■□□□□ 0.44
FNDC1-201ENST00000297267 UBASH3AP57075 661 aa17.77■□□□□ 0.44
FNDC1-201ENST00000297267 IQCEQ6IPM2 695 aa17.77■□□□□ 0.44
FNDC1-201ENST00000297267 PLEKHA4Q9H4M7 779 aa17.77■□□□□ 0.44
FNDC1-201ENST00000297267 ZSCAN12O43309 604 aa17.77■□□□□ 0.44
FNDC1-201ENST00000297267 ECHDC1Q9NTX5 307 aa17.77■□□□□ 0.44
FNDC1-201ENST00000297267 SAP30BPQ9UHR5 308 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms