RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 LARP6Q9BRS8 491 aaKnown RBP11.21□□□□□ -0.62
UBLCP1-201ENST00000296786 NSFL1CQ9UNZ2 370 aaKnown RBP11.21□□□□□ -0.62
UBLCP1-201ENST00000296786 RPAP1Q9BWH6 1393 aaPredicted RBP11.21□□□□□ -0.62
UBLCP1-201ENST00000296786 PRPF40BQ6NWY9 871 aaKnown RBP11.2□□□□□ -0.62
UBLCP1-201ENST00000296786 TMEM63CQ9P1W3 806 aa11.2□□□□□ -0.62
UBLCP1-201ENST00000296786 LIMCH1Q9UPQ0 1083 aa11.2□□□□□ -0.62
UBLCP1-201ENST00000296786 TJP1Q07157 1748 aa11.2□□□□□ -0.62
UBLCP1-201ENST00000296786 ABCA3Q99758 1704 aa11.2□□□□□ -0.62
UBLCP1-201ENST00000296786 CCDC171Q6TFL3 1326 aa11.2□□□□□ -0.62
UBLCP1-201ENST00000296786 WDR33Q9C0J8 1336 aaKnown RBP11.2□□□□□ -0.62
UBLCP1-201ENST00000296786 CABP4P57796 275 aa11.2□□□□□ -0.62
UBLCP1-201ENST00000296786 ADCK5Q3MIX3 580 aa11.2□□□□□ -0.62
UBLCP1-201ENST00000296786 JARID2Q92833 1246 aaPredicted RBP11.2□□□□□ -0.62
UBLCP1-201ENST00000296786 FAM227BQ96M60 508 aa11.2□□□□□ -0.62
UBLCP1-201ENST00000296786 PAPPAQ13219 1627 aa11.2□□□□□ -0.62
UBLCP1-201ENST00000296786 NMIQ13287 307 aaPredicted RBP11.19□□□□□ -0.62
UBLCP1-201ENST00000296786 FOXD4L6Q3SYB3 417 aaPredicted RBP11.19□□□□□ -0.62
UBLCP1-201ENST00000296786 FOXD4L3Q6VB84 417 aaPredicted RBP11.19□□□□□ -0.62
UBLCP1-201ENST00000296786 JAKMIP1Q96N16 626 aaKnown RBP11.19□□□□□ -0.62
UBLCP1-201ENST00000296786 BOLA2Q9H3K6 86 aa11.19□□□□□ -0.62
UBLCP1-201ENST00000296786 HIP1O00291 1037 aa11.19□□□□□ -0.62
UBLCP1-201ENST00000296786 MBD3O95983 291 aa11.19□□□□□ -0.62
UBLCP1-201ENST00000296786 NECTIN1Q15223 517 aa11.19□□□□□ -0.62
UBLCP1-201ENST00000296786 UBE3BQ7Z3V4 1068 aa11.19□□□□□ -0.62
UBLCP1-201ENST00000296786 KCNB2Q92953 911 aa11.19□□□□□ -0.62
UBLCP1-201ENST00000296786 TRIM44Q96DX7 344 aaPredicted RBP11.19□□□□□ -0.62
UBLCP1-201ENST00000296786 ATP5J2-PTCD1G3V325 749 aa11.18□□□□□ -0.62
UBLCP1-201ENST00000296786 PTCD1O75127 700 aaKnown RBP11.18□□□□□ -0.62
UBLCP1-201ENST00000296786 LARGE1O95461 756 aa11.18□□□□□ -0.62
UBLCP1-201ENST00000296786 PRIM1P49642 420 aaKnown RBP11.18□□□□□ -0.62
UBLCP1-201ENST00000296786 CCDC173Q0VFZ6 552 aa11.18□□□□□ -0.62
UBLCP1-201ENST00000296786 FSD1Q9BTV5 496 aa11.18□□□□□ -0.62
UBLCP1-201ENST00000296786 COPRSQ9NQ92 184 aa11.18□□□□□ -0.62
UBLCP1-201ENST00000296786 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.18□□□□□ -0.62
UBLCP1-201ENST00000296786 RBM8AQ9Y5S9 174 aaKnown RBP11.18□□□□□ -0.62
UBLCP1-201ENST00000296786 LAMA4Q16363 1823 aa11.18□□□□□ -0.62
UBLCP1-201ENST00000296786 A0A0D9SFI3 127 aa11.18□□□□□ -0.62
UBLCP1-201ENST00000296786 RFX5P48382 616 aaPredicted RBP11.18□□□□□ -0.62
UBLCP1-201ENST00000296786 PTPN12Q05209 780 aaKnown RBP11.18□□□□□ -0.62
UBLCP1-201ENST00000296786 VPS53Q5VIR6 699 aa11.18□□□□□ -0.62
UBLCP1-201ENST00000296786 TM6SF1Q9BZW5 370 aa11.18□□□□□ -0.62
UBLCP1-201ENST00000296786 ZSWIM6Q9HCJ5 1215 aa11.18□□□□□ -0.62
UBLCP1-201ENST00000296786 ERBB4Q15303 1308 aa11.17□□□□□ -0.62
UBLCP1-201ENST00000296786 SYCE3A1L190 88 aa11.17□□□□□ -0.62
UBLCP1-201ENST00000296786 ZKSCAN1P17029 563 aaPredicted RBP11.17□□□□□ -0.62
UBLCP1-201ENST00000296786 CLCN1P35523 988 aa11.17□□□□□ -0.62
UBLCP1-201ENST00000296786 KCNJ4P48050 445 aa11.17□□□□□ -0.62
UBLCP1-201ENST00000296786 RABL6Q3YEC7 729 aaPredicted RBP11.17□□□□□ -0.62
UBLCP1-201ENST00000296786 ANP32BQ92688 251 aaKnown RBP11.17□□□□□ -0.62
UBLCP1-201ENST00000296786 MAP4K1Q92918 833 aa11.17□□□□□ -0.62
UBLCP1-201ENST00000296786 RBSNQ9H1K0 784 aa11.17□□□□□ -0.62
UBLCP1-201ENST00000296786 GDPD2Q9HCC8 539 aa11.17□□□□□ -0.62
UBLCP1-201ENST00000296786 PDRG1Q9NUG6 133 aa11.17□□□□□ -0.62
UBLCP1-201ENST00000296786 CYP46A1Q9Y6A2 500 aa11.17□□□□□ -0.62
UBLCP1-201ENST00000296786 COL15A1P39059 1388 aa11.17□□□□□ -0.62
UBLCP1-201ENST00000296786 A0A087WZG4 1122 aa11.17□□□□□ -0.62
UBLCP1-201ENST00000296786 ESPNB1AK53 854 aa11.17□□□□□ -0.62
UBLCP1-201ENST00000296786 HSPA2P54652 639 aa11.17□□□□□ -0.62
UBLCP1-201ENST00000296786 CREB3L3Q68CJ9 461 aa11.17□□□□□ -0.62
UBLCP1-201ENST00000296786 LRSAM1Q6UWE0 723 aa11.17□□□□□ -0.62
UBLCP1-201ENST00000296786 BRINP3Q76B58 766 aa11.17□□□□□ -0.62
UBLCP1-201ENST00000296786 PLBD2Q8NHP8 589 aa11.17□□□□□ -0.62
UBLCP1-201ENST00000296786 PPP1R9BQ96SB3 815 aa11.17□□□□□ -0.62
UBLCP1-201ENST00000296786 SNRKQ9NRH2 765 aa11.17□□□□□ -0.62
UBLCP1-201ENST00000296786 MED23Q9ULK4 1368 aa11.17□□□□□ -0.62
UBLCP1-201ENST00000296786 WDR17Q8IZU2 1322 aa11.16□□□□□ -0.62
UBLCP1-201ENST00000296786 PCDH11XQ9BZA7 1347 aa11.16□□□□□ -0.62
UBLCP1-201ENST00000296786 PCDH11YQ9BZA8 1340 aa11.16□□□□□ -0.62
UBLCP1-201ENST00000296786 KAT6BQ8WYB5 2073 aa11.16□□□□□ -0.62
UBLCP1-201ENST00000296786 SYT1P21579 422 aa11.16□□□□□ -0.62
UBLCP1-201ENST00000296786 TFCP2Q12800 502 aa11.16□□□□□ -0.62
UBLCP1-201ENST00000296786 DDX54Q8TDD1 881 aaKnown RBP11.16□□□□□ -0.62
UBLCP1-201ENST00000296786 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.16□□□□□ -0.62
UBLCP1-201ENST00000296786 DBNLQ9UJU6 430 aaKnown RBP11.16□□□□□ -0.62
UBLCP1-201ENST00000296786 SMC3Q9UQE7 1217 aa11.16□□□□□ -0.62
UBLCP1-201ENST00000296786 KCPQ6ZWJ8 1503 aa11.16□□□□□ -0.62
UBLCP1-201ENST00000296786 COL5A2P05997 1499 aaPredicted RBP11.16□□□□□ -0.62
UBLCP1-201ENST00000296786 STX6O43752 255 aa11.16□□□□□ -0.62
UBLCP1-201ENST00000296786 ZSCAN22P10073 491 aaPredicted RBP11.16□□□□□ -0.62
UBLCP1-201ENST00000296786 TNNI3KQ59H18 835 aa11.16□□□□□ -0.62
UBLCP1-201ENST00000296786 TOM1L2Q6ZVM7 507 aa11.16□□□□□ -0.62
UBLCP1-201ENST00000296786 USP48Q86UV5 1035 aa11.16□□□□□ -0.62
UBLCP1-201ENST00000296786 CCDC83Q8IWF9 413 aa11.16□□□□□ -0.62
UBLCP1-201ENST00000296786 EDC3Q96F86 508 aaKnown RBP11.16□□□□□ -0.62
UBLCP1-201ENST00000296786 PRDM11Q9NQV5 511 aa11.16□□□□□ -0.62
UBLCP1-201ENST00000296786 FPGT-TNNI3KV9GXZ4 949 aa11.16□□□□□ -0.62
UBLCP1-201ENST00000296786 TOGARAM1Q9Y4F4 1720 aa11.15□□□□□ -0.62
UBLCP1-201ENST00000296786 STRCQ7RTU9 1775 aa11.15□□□□□ -0.62
UBLCP1-201ENST00000296786 NBPF26B4DH59 902 aa11.15□□□□□ -0.62
UBLCP1-201ENST00000296786 SLC27A2O14975 620 aa11.15□□□□□ -0.62
UBLCP1-201ENST00000296786 GADD45BO75293 160 aaPredicted RBP11.15□□□□□ -0.62
UBLCP1-201ENST00000296786 CASP7P55210 303 aa11.15□□□□□ -0.62
UBLCP1-201ENST00000296786 NBPF14Q5TI25 921 aa11.15□□□□□ -0.62
UBLCP1-201ENST00000296786 NBPF10Q6P3W6 841 aaKnown RBP11.15□□□□□ -0.62
UBLCP1-201ENST00000296786 ZNF589Q86UQ0 364 aaPredicted RBP11.15□□□□□ -0.62
UBLCP1-201ENST00000296786 NBPF15Q8N660 670 aa11.15□□□□□ -0.62
UBLCP1-201ENST00000296786 ZCRB1Q8TBF4 217 aaKnown RBP11.15□□□□□ -0.62
UBLCP1-201ENST00000296786 ANO8Q9HCE9 1232 aaPredicted RBP11.15□□□□□ -0.62
UBLCP1-201ENST00000296786 JCADQ9P266 1359 aa11.15□□□□□ -0.63
UBLCP1-201ENST00000296786 ATP5JP18859 108 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms