RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 ALDH1L1O75891 902 aa28.63■■■□□ 2.17
LINC01116-201ENST00000295549 ANKRD36CQ5JPF3 1778 aa28.63■■■□□ 2.17
LINC01116-201ENST00000295549 FAM177BA6PVY3 158 aa28.62■■■□□ 2.17
LINC01116-201ENST00000295549 PRR5LQ6MZQ0 368 aa28.62■■■□□ 2.17
LINC01116-201ENST00000295549 TRMT112Q9UI30 125 aaKnown RBP28.62■■■□□ 2.17
LINC01116-201ENST00000295549 CCT4P50991 539 aaKnown RBP28.61■■■□□ 2.17
LINC01116-201ENST00000295549 GCKRQ14397 625 aa28.61■■■□□ 2.17
LINC01116-201ENST00000295549 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.61■■■□□ 2.17
LINC01116-201ENST00000295549 NPHP1O15259 732 aa28.6■■■□□ 2.17
LINC01116-201ENST00000295549 GTF2E1P29083 439 aaPredicted RBP28.6■■■□□ 2.17
LINC01116-201ENST00000295549 INTS3Q68E01 1043 aaKnown RBP28.6■■■□□ 2.17
LINC01116-201ENST00000295549 ZBTB38Q8NAP3 1195 aaPredicted RBP28.6■■■□□ 2.17
LINC01116-201ENST00000295549 NRXN2Q9P2S2 1712 aa28.6■■■□□ 2.17
LINC01116-201ENST00000295549 MS4A1P11836 297 aa28.59■■■□□ 2.17
LINC01116-201ENST00000295549 ST5P78524 1137 aa28.59■■■□□ 2.17
LINC01116-201ENST00000295549 DZIP1LQ8IYY4 767 aaKnown RBP28.59■■■□□ 2.17
LINC01116-201ENST00000295549 CLUAP1Q96AJ1 413 aa28.59■■■□□ 2.17
LINC01116-201ENST00000295549 TNNQ9UQP3 1299 aa28.59■■■□□ 2.17
LINC01116-201ENST00000295549 SH3TC1Q8TE82 1336 aa28.58■■■□□ 2.17
LINC01116-201ENST00000295549 PCCAP05165 728 aaPredicted RBP28.58■■■□□ 2.17
LINC01116-201ENST00000295549 NUTM1Q86Y26 1132 aa28.58■■■□□ 2.17
LINC01116-201ENST00000295549 FTSJ3Q8IY81 847 aaKnown RBP28.58■■■□□ 2.17
LINC01116-201ENST00000295549 PLIN1O60240 522 aa28.57■■■□□ 2.16
LINC01116-201ENST00000295549 ERFEQ4G0M1 354 aa28.57■■■□□ 2.16
LINC01116-201ENST00000295549 SLC10A5Q5PT55 438 aa28.57■■■□□ 2.16
LINC01116-201ENST00000295549 FAM89AQ96GI7 184 aa28.57■■■□□ 2.16
LINC01116-201ENST00000295549 C10orf71Q711Q0 1435 aa28.56■■■□□ 2.16
LINC01116-201ENST00000295549 H7C1W4 665 aa28.56■■■□□ 2.16
LINC01116-201ENST00000295549 BRIP1Q9BX63 1249 aa28.56■■■□□ 2.16
LINC01116-201ENST00000295549 PPP1R1BQ9UD71 204 aaPredicted RBP28.56■■■□□ 2.16
LINC01116-201ENST00000295549 CD2APQ9Y5K6 639 aa28.56■■■□□ 2.16
LINC01116-201ENST00000295549 LRP5O75197 1615 aa28.56■■■□□ 2.16
LINC01116-201ENST00000295549 AFDNP55196 1824 aaKnown RBP28.55■■■□□ 2.16
LINC01116-201ENST00000295549 RLBP1P12271 317 aa28.54■■■□□ 2.16
LINC01116-201ENST00000295549 SYNE4Q8N205 404 aa28.54■■■□□ 2.16
LINC01116-201ENST00000295549 CCDC24Q8N4L8 307 aa28.54■■■□□ 2.16
LINC01116-201ENST00000295549 GRM8O00222 908 aa28.53■■■□□ 2.16
LINC01116-201ENST00000295549 RRP1P56182 461 aaKnown RBP28.53■■■□□ 2.16
LINC01116-201ENST00000295549 PDE3AQ14432 1141 aa28.53■■■□□ 2.16
LINC01116-201ENST00000295549 HSP90B1P14625 803 aaKnown RBP28.52■■■□□ 2.16
LINC01116-201ENST00000295549 TMEM57Q8N5G2 664 aa28.52■■■□□ 2.16
LINC01116-201ENST00000295549 C9orf78Q9NZ63 289 aaPredicted RBP28.52■■■□□ 2.16
LINC01116-201ENST00000295549 CDHR2Q9BYE9 1310 aa28.52■■■□□ 2.16
LINC01116-201ENST00000295549 ABCC12Q96J65 1359 aa28.52■■■□□ 2.16
LINC01116-201ENST00000295549 RIC1Q4ADV7 1423 aa28.52■■■□□ 2.16
LINC01116-201ENST00000295549 UTYO14607 1347 aa28.52■■■□□ 2.16
LINC01116-201ENST00000295549 KLRG2A4D1S0 409 aaPredicted RBP28.52■■■□□ 2.16
LINC01116-201ENST00000295549 CASP7P55210 303 aa28.52■■■□□ 2.16
LINC01116-201ENST00000295549 RTL5Q5HYW3 569 aaPredicted RBP28.52■■■□□ 2.16
LINC01116-201ENST00000295549 USP44Q9H0E7 712 aa28.52■■■□□ 2.16
LINC01116-201ENST00000295549 IRS4O14654 1257 aaPredicted RBP28.51■■■□□ 2.15
LINC01116-201ENST00000295549 PDE6BP35913 854 aa28.51■■■□□ 2.15
LINC01116-201ENST00000295549 UBE3BQ7Z3V4 1068 aa28.51■■■□□ 2.15
LINC01116-201ENST00000295549 PANK1Q8TE04 598 aa28.51■■■□□ 2.15
LINC01116-201ENST00000295549 TGFB2P61812 414 aa28.5■■■□□ 2.15
LINC01116-201ENST00000295549 JARID2Q92833 1246 aaPredicted RBP28.5■■■□□ 2.15
LINC01116-201ENST00000295549 FHDC1Q9C0D6 1143 aaPredicted RBP28.5■■■□□ 2.15
LINC01116-201ENST00000295549 HCLS1P14317 486 aaPredicted RBP28.49■■■□□ 2.15
LINC01116-201ENST00000295549 PDZRN3Q9UPQ7 1066 aa28.49■■■□□ 2.15
LINC01116-201ENST00000295549 NLRP3Q96P20 1036 aa28.48■■■□□ 2.15
LINC01116-201ENST00000295549 N4BP2Q86UW6 1770 aaPredicted RBP28.47■■■□□ 2.15
LINC01116-201ENST00000295549 NBPF7P0C2Y1 421 aaPredicted RBP28.47■■■□□ 2.15
LINC01116-201ENST00000295549 PLA2G12BQ9BX93 195 aa28.47■■■□□ 2.15
LINC01116-201ENST00000295549 C20orf194Q5TEA3 1177 aa28.46■■■□□ 2.15
LINC01116-201ENST00000295549 ITPRIPQ8IWB1 547 aa28.46■■■□□ 2.15
LINC01116-201ENST00000295549 KLHL34Q8N239 644 aa28.46■■■□□ 2.15
LINC01116-201ENST00000295549 SYT17Q9BSW7 474 aa28.46■■■□□ 2.15
LINC01116-201ENST00000295549 SUPT16HQ9Y5B9 1047 aaKnown RBP28.46■■■□□ 2.15
LINC01116-201ENST00000295549 KIF13BQ9NQT8 1826 aa28.45■■■□□ 2.15
LINC01116-201ENST00000295549 PDE8AO60658 829 aa28.45■■■□□ 2.15
LINC01116-201ENST00000295549 CENPBP07199 599 aaPredicted RBP28.45■■■□□ 2.15
LINC01116-201ENST00000295549 CRY2Q49AN0 593 aa28.45■■■□□ 2.15
LINC01116-201ENST00000295549 H0YIN7 160 aa28.43■■■□□ 2.14
LINC01116-201ENST00000295549 MVPQ14764 893 aaKnown RBP28.43■■■□□ 2.14
LINC01116-201ENST00000295549 C3orf67Q6ZVT6 689 aa28.43■■■□□ 2.14
LINC01116-201ENST00000295549 GNAI3P08754 354 aa28.43■■■□□ 2.14
LINC01116-201ENST00000295549 SF3B3Q15393 1217 aaKnown RBP28.43■■■□□ 2.14
LINC01116-201ENST00000295549 MEIS3Q99687 375 aa28.43■■■□□ 2.14
LINC01116-201ENST00000295549 UBTFL1P0CB47 393 aaPredicted RBP28.42■■■□□ 2.14
LINC01116-201ENST00000295549 SRGNP10124 158 aa28.42■■■□□ 2.14
LINC01116-201ENST00000295549 C2CD5Q86YS7 1000 aa28.42■■■□□ 2.14
LINC01116-201ENST00000295549 HDAC5Q9UQL6 1122 aa28.42■■■□□ 2.14
LINC01116-201ENST00000295549 COG6Q9Y2V7 657 aa28.42■■■□□ 2.14
LINC01116-201ENST00000295549 ZBTB7BO15156 539 aaPredicted RBP28.41■■■□□ 2.14
LINC01116-201ENST00000295549 DPEP1P16444 411 aa28.41■■■□□ 2.14
LINC01116-201ENST00000295549 NLGN2Q8NFZ4 835 aa28.41■■■□□ 2.14
LINC01116-201ENST00000295549 ANKRD31Q8N7Z5 1873 aa28.41■■■□□ 2.14
LINC01116-201ENST00000295549 A0A0G2JLW4 131 aa28.4■■■□□ 2.14
LINC01116-201ENST00000295549 CHRNA5P30532 468 aa28.4■■■□□ 2.14
LINC01116-201ENST00000295549 CTSWP56202 376 aa28.4■■■□□ 2.14
LINC01116-201ENST00000295549 SUCLG2Q96I99 432 aa28.4■■■□□ 2.14
LINC01116-201ENST00000295549 DDX19BQ9UMR2 479 aa28.4■■■□□ 2.14
LINC01116-201ENST00000295549 NPR1P16066 1061 aa28.39■■■□□ 2.14
LINC01116-201ENST00000295549 KCNA3P22001 575 aa28.39■■■□□ 2.14
LINC01116-201ENST00000295549 HOXA10P31260 410 aaPredicted RBP28.39■■■□□ 2.14
LINC01116-201ENST00000295549 FOXO4P98177 505 aa28.39■■■□□ 2.14
LINC01116-201ENST00000295549 MASTLQ96GX5 879 aa28.39■■■□□ 2.14
LINC01116-201ENST00000295549 KAZALD1Q96I82 304 aa28.39■■■□□ 2.14
LINC01116-201ENST00000295549 DDX60Q8IY21 1712 aaKnown RBP28.38■■■□□ 2.13
LINC01116-201ENST00000295549 CSF1RP07333 972 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms