RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 LRP10Q7Z4F1 713 aa22.65■■□□□ 1.22
TFF3-201ENST00000291525 RNF123Q5XPI4 1314 aa22.64■■□□□ 1.22
TFF3-201ENST00000291525 IARSP41252 1262 aaKnown RBP22.64■■□□□ 1.21
TFF3-201ENST00000291525 HTRA3P83110 453 aa22.64■■□□□ 1.21
TFF3-201ENST00000291525 PSMD1Q99460 953 aa22.64■■□□□ 1.21
TFF3-201ENST00000291525 UTP14AQ9BVJ6 771 aaKnown RBP22.64■■□□□ 1.21
TFF3-201ENST00000291525 PRKRIP1Q9H875 184 aaPredicted RBP22.64■■□□□ 1.21
TFF3-201ENST00000291525 ADAMTS8Q9UP79 889 aa22.64■■□□□ 1.21
TFF3-201ENST00000291525 PROSER3Q2NL68 480 aa22.63■■□□□ 1.21
TFF3-201ENST00000291525 OLFM4Q6UX06 510 aa22.63■■□□□ 1.21
TFF3-201ENST00000291525 SYNE4Q8N205 404 aa22.63■■□□□ 1.21
TFF3-201ENST00000291525 L3MBTL3Q96JM7 780 aaPredicted RBP22.63■■□□□ 1.21
TFF3-201ENST00000291525 NLRP3Q96P20 1036 aa22.63■■□□□ 1.21
TFF3-201ENST00000291525 CRAMP1Q96RY5 1269 aa22.63■■□□□ 1.21
TFF3-201ENST00000291525 TMX4Q9H1E5 349 aaPredicted RBP22.63■■□□□ 1.21
TFF3-201ENST00000291525 DDX21Q9NR30 783 aaKnown RBP eCLIP22.63■■□□□ 1.21
TFF3-201ENST00000291525 TRIM35Q9UPQ4 493 aa22.63■■□□□ 1.21
TFF3-201ENST00000291525 ANXA1P04083 346 aa22.62■■□□□ 1.21
TFF3-201ENST00000291525 HOXB7P09629 217 aa22.62■■□□□ 1.21
TFF3-201ENST00000291525 CHADLQ6NUI6 762 aa22.62■■□□□ 1.21
TFF3-201ENST00000291525 COPS6Q7L5N1 327 aa22.62■■□□□ 1.21
TFF3-201ENST00000291525 JDP2Q8WYK2 163 aa22.62■■□□□ 1.21
TFF3-201ENST00000291525 NECTIN2Q92692 538 aa22.62■■□□□ 1.21
TFF3-201ENST00000291525 AIMP1Q12904 312 aaKnown RBP22.61■■□□□ 1.21
TFF3-201ENST00000291525 XAGE3Q8WTP9 111 aa22.61■■□□□ 1.21
TFF3-201ENST00000291525 PPEF1O14829 653 aaPredicted RBP22.6■■□□□ 1.21
TFF3-201ENST00000291525 JMYQ8N9B5 988 aa22.6■■□□□ 1.21
TFF3-201ENST00000291525 ZNF541Q9H0D2 1346 aa22.59■■□□□ 1.21
TFF3-201ENST00000291525 SNED1Q8TER0 1413 aa22.59■■□□□ 1.21
TFF3-201ENST00000291525 IFFO2Q5TF58 517 aa22.59■■□□□ 1.21
TFF3-201ENST00000291525 HDGFL1Q5TGJ6 251 aa22.59■■□□□ 1.21
TFF3-201ENST00000291525 FZD9O00144 591 aa22.58■■□□□ 1.21
TFF3-201ENST00000291525 SLC10A5Q5PT55 438 aa22.58■■□□□ 1.21
TFF3-201ENST00000291525 LDHDQ86WU2 507 aa22.58■■□□□ 1.21
TFF3-201ENST00000291525 CFAP44Q96MT7 982 aa22.58■■□□□ 1.21
TFF3-201ENST00000291525 CALD1Q05682 793 aaKnown RBP22.57■■□□□ 1.2
TFF3-201ENST00000291525 TCIRG1Q13488 830 aa22.57■■□□□ 1.2
TFF3-201ENST00000291525 KRT24Q2M2I5 525 aa22.57■■□□□ 1.2
TFF3-201ENST00000291525 TAF1DQ9H5J8 278 aaPredicted RBP22.57■■□□□ 1.2
TFF3-201ENST00000291525 CHPF2Q9P2E5 772 aa22.57■■□□□ 1.2
TFF3-201ENST00000291525 HACL1Q9UJ83 578 aa22.57■■□□□ 1.2
TFF3-201ENST00000291525 EIF6P56537 245 aaKnown RBP22.56■■□□□ 1.2
TFF3-201ENST00000291525 NLRP10Q86W26 655 aa22.56■■□□□ 1.2
TFF3-201ENST00000291525 GPC2Q8N158 579 aa22.56■■□□□ 1.2
TFF3-201ENST00000291525 DBF4Q9UBU7 674 aaPredicted RBP22.56■■□□□ 1.2
TFF3-201ENST00000291525 LAMB2P55268 1798 aa22.55■■□□□ 1.2
TFF3-201ENST00000291525 C3orf67Q6ZVT6 689 aa22.55■■□□□ 1.2
TFF3-201ENST00000291525 LARGE2Q8N3Y3 721 aa22.55■■□□□ 1.2
TFF3-201ENST00000291525 TRMT112Q9UI30 125 aaKnown RBP22.55■■□□□ 1.2
TFF3-201ENST00000291525 SH3TC1Q8TE82 1336 aa22.55■■□□□ 1.2
TFF3-201ENST00000291525 PNMA8AQ86V59 439 aaPredicted RBP22.54■■□□□ 1.2
TFF3-201ENST00000291525 PLBD2Q8NHP8 589 aa22.54■■□□□ 1.2
TFF3-201ENST00000291525 TCERG1O14776 1098 aaKnown RBP22.53■■□□□ 1.2
TFF3-201ENST00000291525 POTEIP0CG38 1075 aa22.53■■□□□ 1.2
TFF3-201ENST00000291525 POTEJP0CG39 1038 aa22.53■■□□□ 1.2
TFF3-201ENST00000291525 EAPPQ56P03 285 aaPredicted RBP22.53■■□□□ 1.2
TFF3-201ENST00000291525 DUSP27Q5VZP5 1158 aa22.53■■□□□ 1.2
TFF3-201ENST00000291525 CREBZFQ9NS37 354 aa22.53■■□□□ 1.2
TFF3-201ENST00000291525 HYPKQ9NX55 129 aa22.53■■□□□ 1.2
TFF3-201ENST00000291525 ATP6V0A2Q9Y487 856 aa22.53■■□□□ 1.2
TFF3-201ENST00000291525 ABCC4O15439 1325 aa22.53■■□□□ 1.2
TFF3-201ENST00000291525 EPHX2P34913 555 aa22.52■■□□□ 1.2
TFF3-201ENST00000291525 GNAI1P63096 354 aa22.52■■□□□ 1.2
TFF3-201ENST00000291525 ANKRD13DQ6ZTN6 518 aa22.52■■□□□ 1.2
TFF3-201ENST00000291525 DDX46Q7L014 1031 aaKnown RBP22.52■■□□□ 1.2
TFF3-201ENST00000291525 SUPT20HQ8NEM7 779 aa22.52■■□□□ 1.2
TFF3-201ENST00000291525 VPS33BQ9H267 617 aa22.52■■□□□ 1.2
TFF3-201ENST00000291525 MBIPQ9NS73 344 aa22.52■■□□□ 1.2
TFF3-201ENST00000291525 IFT57Q9NWB7 429 aa22.52■■□□□ 1.2
TFF3-201ENST00000291525 APAF1O14727 1248 aa22.51■■□□□ 1.19
TFF3-201ENST00000291525 BBOX1O75936 387 aa22.51■■□□□ 1.19
TFF3-201ENST00000291525 HCLS1P14317 486 aaPredicted RBP22.51■■□□□ 1.19
TFF3-201ENST00000291525 LMOD1P29536 600 aaPredicted RBP22.51■■□□□ 1.19
TFF3-201ENST00000291525 NIM1KQ8IY84 436 aa22.51■■□□□ 1.19
TFF3-201ENST00000291525 CLEC11AQ9Y240 323 aa22.51■■□□□ 1.19
TFF3-201ENST00000291525 PPIP5K2O43314 1243 aa22.5■■□□□ 1.19
TFF3-201ENST00000291525 GJA3Q9Y6H8 435 aa22.5■■□□□ 1.19
TFF3-201ENST00000291525 ADAMTSL1Q8N6G6 1762 aa22.49■■□□□ 1.19
TFF3-201ENST00000291525 ZNF853P0CG23 659 aa22.49■■□□□ 1.19
TFF3-201ENST00000291525 TMC4Q7Z404 712 aa22.49■■□□□ 1.19
TFF3-201ENST00000291525 CHMP4AQ9BY43 222 aa22.49■■□□□ 1.19
TFF3-201ENST00000291525 COL4A5P29400 1685 aa22.49■■□□□ 1.19
TFF3-201ENST00000291525 GRAPQ13588 217 aa22.48■■□□□ 1.19
TFF3-201ENST00000291525 DPP8Q6V1X1 898 aaPredicted RBP22.48■■□□□ 1.19
TFF3-201ENST00000291525 SP8Q8IXZ3 490 aa22.48■■□□□ 1.19
TFF3-201ENST00000291525 GRAPLQ8TC17 118 aaPredicted RBP22.48■■□□□ 1.19
TFF3-201ENST00000291525 GOLGA2Q08379 1002 aa22.47■■□□□ 1.19
TFF3-201ENST00000291525 ISCA1Q9BUE6 129 aa22.47■■□□□ 1.19
TFF3-201ENST00000291525 DDX60Q8IY21 1712 aaKnown RBP22.47■■□□□ 1.19
TFF3-201ENST00000291525 PASKQ96RG2 1323 aa22.47■■□□□ 1.19
TFF3-201ENST00000291525 AOC3Q16853 763 aa22.46■■□□□ 1.19
TFF3-201ENST00000291525 MPNDQ8N594 471 aa22.46■■□□□ 1.19
TFF3-201ENST00000291525 RTFDC1Q9BY42 306 aaPredicted RBP22.46■■□□□ 1.19
TFF3-201ENST00000291525 ATP5J2-PTCD1G3V325 749 aa22.44■■□□□ 1.18
TFF3-201ENST00000291525 HSP90B1P14625 803 aaKnown RBP22.44■■□□□ 1.18
TFF3-201ENST00000291525 RIC3Q7Z5B4 369 aa22.44■■□□□ 1.18
TFF3-201ENST00000291525 TMEM88BA6NKF7 163 aa22.43■■□□□ 1.18
TFF3-201ENST00000291525 ZEB1P37275 1124 aaPredicted RBP22.43■■□□□ 1.18
TFF3-201ENST00000291525 TRIM28Q13263 835 aaKnown RBP22.43■■□□□ 1.18
TFF3-201ENST00000291525 SLC51AQ86UW1 340 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms