RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 UBAC1Q9BSL1 405 aa5.62□□□□□ -1.51
UBR1-201ENST00000290650 PHF23Q9BUL5 403 aaPredicted RBP5.62□□□□□ -1.51
UBR1-201ENST00000290650 NAPBQ9H115 298 aa5.62□□□□□ -1.51
UBR1-201ENST00000290650 CLCN1P35523 988 aa5.62□□□□□ -1.51
UBR1-201ENST00000290650 IGHMBP2P38935 993 aaKnown RBP5.62□□□□□ -1.51
UBR1-201ENST00000290650 KSR2Q6VAB6 950 aa5.62□□□□□ -1.51
UBR1-201ENST00000290650 MIGA1Q8NAN2 632 aa5.62□□□□□ -1.51
UBR1-201ENST00000290650 C16orf45Q96MC5 204 aaPredicted RBP5.62□□□□□ -1.51
UBR1-201ENST00000290650 SHROOM2Q13796 1616 aa5.62□□□□□ -1.51
UBR1-201ENST00000290650 SOS1Q07889 1333 aaPredicted RBP5.62□□□□□ -1.51
UBR1-201ENST00000290650 MARCKSP29966 332 aaPredicted RBP5.61□□□□□ -1.51
UBR1-201ENST00000290650 C17orf53Q8N3J3 647 aaPredicted RBP5.61□□□□□ -1.51
UBR1-201ENST00000290650 NEK1Q96PY6 1258 aa5.61□□□□□ -1.51
UBR1-201ENST00000290650 NAT10Q9H0A0 1025 aaKnown RBP5.61□□□□□ -1.51
UBR1-201ENST00000290650 PALD1Q9ULE6 856 aa5.61□□□□□ -1.51
UBR1-201ENST00000290650 GADD45BO75293 160 aaPredicted RBP5.61□□□□□ -1.51
UBR1-201ENST00000290650 UNC5CLQ8IV45 518 aa5.61□□□□□ -1.51
UBR1-201ENST00000290650 ERCC4Q92889 916 aaPredicted RBP5.61□□□□□ -1.51
UBR1-201ENST00000290650 C8orf76Q96K31 380 aa5.61□□□□□ -1.51
UBR1-201ENST00000290650 TTC12Q9H892 705 aaPredicted RBP5.61□□□□□ -1.51
UBR1-201ENST00000290650 U3KPZ7 1027 aaPredicted RBP5.61□□□□□ -1.51
UBR1-201ENST00000290650 EDC4Q6P2E9 1401 aaKnown RBP5.61□□□□□ -1.51
UBR1-201ENST00000290650 CHL1O00533 1208 aa5.61□□□□□ -1.51
UBR1-201ENST00000290650 MPHOSPH10O00566 681 aaKnown RBP5.61□□□□□ -1.51
UBR1-201ENST00000290650 CCDC183Q5T5S1 534 aa5.61□□□□□ -1.51
UBR1-201ENST00000290650 NCOA5Q9HCD5 579 aaKnown RBP5.61□□□□□ -1.51
UBR1-201ENST00000290650 VAT1LQ9HCJ6 419 aa5.61□□□□□ -1.51
UBR1-201ENST00000290650 TTC21AQ8NDW8 1320 aa5.61□□□□□ -1.51
UBR1-201ENST00000290650 ZFYVE16Q7Z3T8 1539 aa5.61□□□□□ -1.51
UBR1-201ENST00000290650 SUCLG2Q96I99 432 aa5.61□□□□□ -1.51
UBR1-201ENST00000290650 SSBP05455 408 aaKnown RBP eCLIP5.61□□□□□ -1.51
UBR1-201ENST00000290650 TPM1P09493 284 aa5.61□□□□□ -1.51
UBR1-201ENST00000290650 FSIP1Q8NA03 581 aa5.61□□□□□ -1.51
UBR1-201ENST00000290650 A0A0U1RQG5 324 aaPredicted RBP5.61□□□□□ -1.51
UBR1-201ENST00000290650 IFIT3O14879 490 aaKnown RBP5.61□□□□□ -1.51
UBR1-201ENST00000290650 RAB3GAP1Q15042 981 aa5.61□□□□□ -1.51
UBR1-201ENST00000290650 ZSCAN29Q8IWY8 852 aaPredicted RBP5.61□□□□□ -1.51
UBR1-201ENST00000290650 CPLX3Q8WVH0 158 aa5.61□□□□□ -1.51
UBR1-201ENST00000290650 NGLY1Q96IV0 654 aa5.61□□□□□ -1.51
UBR1-201ENST00000290650 USP16Q9Y5T5 823 aa5.61□□□□□ -1.51
UBR1-201ENST00000290650 IQGAP3Q86VI3 1631 aa5.61□□□□□ -1.51
UBR1-201ENST00000290650 EXOC5O00471 708 aa5.61□□□□□ -1.51
UBR1-201ENST00000290650 MNS1Q8NEH6 495 aa5.61□□□□□ -1.51
UBR1-201ENST00000290650 BRMS1Q9HCU9 246 aa5.61□□□□□ -1.51
UBR1-201ENST00000290650 HOOK1Q9UJC3 728 aaKnown RBP5.61□□□□□ -1.51
UBR1-201ENST00000290650 F8W031 263 aaPredicted RBP5.6□□□□□ -1.51
UBR1-201ENST00000290650 ZFYVE9O95405 1425 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 ZSCAN31Q96LW9 406 aaPredicted RBP5.6□□□□□ -1.51
UBR1-201ENST00000290650 PRR36Q9H6K5 1346 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 ANKRD18BA2A2Z9 1011 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 ZSCAN22P10073 491 aaPredicted RBP5.6□□□□□ -1.51
UBR1-201ENST00000290650 CREB3L3Q68CJ9 461 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 CCAR1Q8IX12 1150 aaKnown RBP5.6□□□□□ -1.51
UBR1-201ENST00000290650 TRIM22Q8IYM9 498 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 TRMT2AQ8IZ69 625 aaKnown RBP5.6□□□□□ -1.51
UBR1-201ENST00000290650 IP6K1Q92551 441 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 SEC62Q99442 399 aaKnown RBP5.6□□□□□ -1.51
UBR1-201ENST00000290650 NACAP1Q9BZK3 213 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 LETM1O95202 739 aaPredicted RBP5.6□□□□□ -1.51
UBR1-201ENST00000290650 ATP6V1AP38606 617 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 KCNQ4P56696 695 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 AEBP2Q6ZN18 517 aaPredicted RBP5.6□□□□□ -1.51
UBR1-201ENST00000290650 ZSCAN30Q86W11 494 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 SIRT2Q8IXJ6 389 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 SLC26A6Q9BXS9 759 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 CFAP45Q9UL16 551 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 XBP1P17861 261 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 OTUD7BQ6GQQ9 843 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 UIMC1Q96RL1 719 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 TCEAL9Q9UHQ7 104 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 MAP3K4Q9Y6R4 1608 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 ROBO2Q9HCK4 1378 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 CFAP100Q494V2 611 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 ZNF790Q6PG37 636 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 DHX37Q8IY37 1157 aaKnown RBP5.6□□□□□ -1.51
UBR1-201ENST00000290650 SIRT1Q96EB6 747 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 DBNDD2Q9BQY9 259 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 GNL3LQ9NVN8 582 aaKnown RBP5.6□□□□□ -1.51
UBR1-201ENST00000290650 KLF18A0A0U1RQI7 1052 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 TAF5LO75529 589 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 SLFNL1Q499Z3 407 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 C8orf37Q96NL8 207 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 ZMYND15Q9H091 742 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 BTG4Q9NY30 223 aa5.6□□□□□ -1.51
UBR1-201ENST00000290650 ABCA6Q8N139 1617 aa5.59□□□□□ -1.51
UBR1-201ENST00000290650 SPDYE4A6NLX3 237 aa5.59□□□□□ -1.51
UBR1-201ENST00000290650 MAPK8IP2Q13387 824 aaPredicted RBP5.59□□□□□ -1.51
UBR1-201ENST00000290650 ENOX2Q16206 610 aaKnown RBP5.59□□□□□ -1.51
UBR1-201ENST00000290650 ANO6Q4KMQ2 910 aa5.59□□□□□ -1.51
UBR1-201ENST00000290650 TMEM67Q5HYA8 995 aa5.59□□□□□ -1.51
UBR1-201ENST00000290650 ANTXR1Q9H6X2 564 aa5.59□□□□□ -1.51
UBR1-201ENST00000290650 PLXNC1O60486 1568 aa5.59□□□□□ -1.51
UBR1-201ENST00000290650 INSRP06213 1382 aa5.59□□□□□ -1.51
UBR1-201ENST00000290650 ZPR1O75312 459 aa5.59□□□□□ -1.51
UBR1-201ENST00000290650 CBX1P83916 185 aa5.59□□□□□ -1.51
UBR1-201ENST00000290650 KRT32Q14532 448 aa5.59□□□□□ -1.51
UBR1-201ENST00000290650 GAS2L3Q86XJ1 694 aa5.59□□□□□ -1.51
UBR1-201ENST00000290650 PAG1Q9NWQ8 432 aa5.59□□□□□ -1.51
UBR1-201ENST00000290650 TET3O43151 1660 aa5.59□□□□□ -1.51
UBR1-201ENST00000290650 SLC9C2Q5TAH2 1124 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms