RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 RUFY3Q7L099 469 aa18.87■□□□□ 0.61
SMAD6-201ENST00000288840 RAD50Q92878 1312 aa18.86■□□□□ 0.61
SMAD6-201ENST00000288840 LMBR1LQ6UX01 489 aa18.86■□□□□ 0.61
SMAD6-201ENST00000288840 BRF1Q92994 677 aa18.86■□□□□ 0.61
SMAD6-201ENST00000288840 ZSCAN31Q96LW9 406 aaPredicted RBP18.86■□□□□ 0.61
SMAD6-201ENST00000288840 SDF4Q9BRK5 362 aa18.86■□□□□ 0.61
SMAD6-201ENST00000288840 TPM2P07951 284 aa18.85■□□□□ 0.61
SMAD6-201ENST00000288840 DDIT3P35638 169 aa18.85■□□□□ 0.61
SMAD6-201ENST00000288840 UBE2HP62256 183 aa18.85■□□□□ 0.61
SMAD6-201ENST00000288840 TFCP2Q12800 502 aa18.85■□□□□ 0.61
SMAD6-201ENST00000288840 INTS4Q96HW7 963 aaKnown RBP18.85■□□□□ 0.61
SMAD6-201ENST00000288840 GIGYF1O75420 1035 aaPredicted RBP18.85■□□□□ 0.61
SMAD6-201ENST00000288840 ME1P48163 572 aa18.85■□□□□ 0.61
SMAD6-201ENST00000288840 TIMM10P62072 90 aa18.85■□□□□ 0.61
SMAD6-201ENST00000288840 SEC62Q99442 399 aaKnown RBP18.84■□□□□ 0.61
SMAD6-201ENST00000288840 USP16Q9Y5T5 823 aa18.84■□□□□ 0.61
SMAD6-201ENST00000288840 ATP2B1P20020 1258 aa18.84■□□□□ 0.61
SMAD6-201ENST00000288840 TSC1Q92574 1164 aa18.84■□□□□ 0.61
SMAD6-201ENST00000288840 ZNF496Q96IT1 587 aaPredicted RBP18.84■□□□□ 0.61
SMAD6-201ENST00000288840 ZKSCAN5Q9Y2L8 839 aa18.84■□□□□ 0.61
SMAD6-201ENST00000288840 CCDC73Q6ZRK6 1079 aa18.83■□□□□ 0.61
SMAD6-201ENST00000288840 SIGLEC1Q9BZZ2 1709 aa18.83■□□□□ 0.61
SMAD6-201ENST00000288840 NPHP1O15259 732 aa18.83■□□□□ 0.6
SMAD6-201ENST00000288840 MAP3K11Q16584 847 aa18.83■□□□□ 0.6
SMAD6-201ENST00000288840 CCDC171Q6TFL3 1326 aa18.83■□□□□ 0.6
SMAD6-201ENST00000288840 A0A0D9SFI3 127 aa18.83■□□□□ 0.6
SMAD6-201ENST00000288840 ME3Q16798 604 aa18.83■□□□□ 0.6
SMAD6-201ENST00000288840 FILIP1Q7Z7B0 1213 aa18.83■□□□□ 0.6
SMAD6-201ENST00000288840 DACT1Q9NYF0 836 aa18.83■□□□□ 0.6
SMAD6-201ENST00000288840 CRB1P82279 1406 aa18.83■□□□□ 0.6
SMAD6-201ENST00000288840 SH2B1Q9NRF2 756 aaPredicted RBP18.82■□□□□ 0.6
SMAD6-201ENST00000288840 GPTP24298 496 aa18.82■□□□□ 0.6
SMAD6-201ENST00000288840 ZNF790Q6PG37 636 aa18.82■□□□□ 0.6
SMAD6-201ENST00000288840 DBNDD2Q9BQY9 259 aa18.82■□□□□ 0.6
SMAD6-201ENST00000288840 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.82■□□□□ 0.63e-6■■■■□ 21.6
SMAD6-201ENST00000288840 PI4K2BQ8TCG2 481 aa18.82■□□□□ 0.6
SMAD6-201ENST00000288840 MYO5BQ9ULV0 1848 aa18.81■□□□□ 0.6
SMAD6-201ENST00000288840 RALYLQ86SE5 291 aaKnown RBP18.81■□□□□ 0.6
SMAD6-201ENST00000288840 CREBRFQ8IUR6 639 aa18.81■□□□□ 0.6
SMAD6-201ENST00000288840 STAP2Q9UGK3 403 aa18.81■□□□□ 0.6
SMAD6-201ENST00000288840 KIF3AQ9Y496 699 aa18.81■□□□□ 0.6
SMAD6-201ENST00000288840 ALDH1L1O75891 902 aa18.81■□□□□ 0.6
SMAD6-201ENST00000288840 ANKRD1Q15327 319 aa18.81■□□□□ 0.6
SMAD6-201ENST00000288840 LSG1Q9H089 658 aaKnown RBP18.81■□□□□ 0.6
SMAD6-201ENST00000288840 DDX21Q9NR30 783 aaKnown RBP eCLIP18.81■□□□□ 0.6
SMAD6-201ENST00000288840 ADGRB2O60241 1585 aa18.81■□□□□ 0.6
SMAD6-201ENST00000288840 CHMP4CQ96CF2 233 aa18.81■□□□□ 0.6
SMAD6-201ENST00000288840 LETM1O95202 739 aaPredicted RBP18.8■□□□□ 0.6
SMAD6-201ENST00000288840 ZNF594Q96JF6 807 aaPredicted RBP18.8■□□□□ 0.6
SMAD6-201ENST00000288840 NEK1Q96PY6 1258 aa18.8■□□□□ 0.6
SMAD6-201ENST00000288840 TMEM131LA2VDJ0 1609 aa18.8■□□□□ 0.6
SMAD6-201ENST00000288840 JAK2O60674 1132 aa18.8■□□□□ 0.6
SMAD6-201ENST00000288840 IFIT1P09914 478 aaKnown RBP18.8■□□□□ 0.6
SMAD6-201ENST00000288840 SLFNL1Q499Z3 407 aa18.8■□□□□ 0.6
SMAD6-201ENST00000288840 CDC37L1Q7L3B6 337 aa18.8■□□□□ 0.6
SMAD6-201ENST00000288840 CEP126Q9P2H0 1117 aa18.8■□□□□ 0.6
SMAD6-201ENST00000288840 CHGBP05060 677 aa18.8■□□□□ 0.6
SMAD6-201ENST00000288840 CCDC57Q2TAC2 916 aa18.8■□□□□ 0.6
SMAD6-201ENST00000288840 Q6ZUG5 572 aa18.8■□□□□ 0.6
SMAD6-201ENST00000288840 IFNL2Q8IZJ0 200 aa18.8■□□□□ 0.6
SMAD6-201ENST00000288840 TTC39AQ5SRH9 613 aa18.79■□□□□ 0.6
SMAD6-201ENST00000288840 TTC41PQ6P2S7 1318 aa18.79■□□□□ 0.6
SMAD6-201ENST00000288840 SLC27A2O14975 620 aa18.79■□□□□ 0.6
SMAD6-201ENST00000288840 NFXL1Q6ZNB6 911 aa18.79■□□□□ 0.6
SMAD6-201ENST00000288840 AXIN2Q9Y2T1 843 aa18.79■□□□□ 0.6
SMAD6-201ENST00000288840 CLTCQ00610 1675 aaKnown RBP18.79■□□□□ 0.6
SMAD6-201ENST00000288840 KINO60870 393 aaKnown RBP18.79■□□□□ 0.6
SMAD6-201ENST00000288840 RRP12Q5JTH9 1297 aaKnown RBP18.79■□□□□ 0.6
SMAD6-201ENST00000288840 ISM2Q6H9L7 571 aa18.79■□□□□ 0.6
SMAD6-201ENST00000288840 LUZP1Q86V48 1076 aa18.79■□□□□ 0.6
SMAD6-201ENST00000288840 TPCN1Q9ULQ1 816 aa18.79■□□□□ 0.6
SMAD6-201ENST00000288840 SNRPA1P09661 255 aaKnown RBP18.78■□□□□ 0.6
SMAD6-201ENST00000288840 PLEKHG1Q9ULL1 1385 aa18.78■□□□□ 0.6
SMAD6-201ENST00000288840 PRDM10Q9NQV6 1147 aa18.78■□□□□ 0.6
SMAD6-201ENST00000288840 POLR3DP05423 398 aaPredicted RBP18.78■□□□□ 0.6
SMAD6-201ENST00000288840 CCDC82Q8N4S0 544 aa18.78■□□□□ 0.6
SMAD6-201ENST00000288840 ERCC4Q92889 916 aaPredicted RBP18.78■□□□□ 0.6
SMAD6-201ENST00000288840 PPP1R9BQ96SB3 815 aa18.78■□□□□ 0.6
SMAD6-201ENST00000288840 PREX1Q8TCU6 1659 aa18.77■□□□□ 0.6
SMAD6-201ENST00000288840 RRP9O43818 475 aaKnown RBP18.77■□□□□ 0.6
SMAD6-201ENST00000288840 OFD1O75665 1012 aa18.77■□□□□ 0.6
SMAD6-201ENST00000288840 TRDNQ13061 729 aa18.77■□□□□ 0.6
SMAD6-201ENST00000288840 IDH1O75874 414 aaKnown RBP18.77■□□□□ 0.59
SMAD6-201ENST00000288840 NCOA5Q9HCD5 579 aaKnown RBP18.77■□□□□ 0.59
SMAD6-201ENST00000288840 NOL7Q9UMY1 257 aaKnown RBP18.77■□□□□ 0.59
SMAD6-201ENST00000288840 A1BGP04217 495 aa18.76■□□□□ 0.59
SMAD6-201ENST00000288840 CUL4AQ13619 759 aa18.76■□□□□ 0.59
SMAD6-201ENST00000288840 VPS53Q5VIR6 699 aa18.76■□□□□ 0.59
SMAD6-201ENST00000288840 SYNE3Q6ZMZ3 975 aa18.76■□□□□ 0.59
SMAD6-201ENST00000288840 CNNM1Q9NRU3 951 aa18.76■□□□□ 0.59
SMAD6-201ENST00000288840 NEURL4Q96JN8 1562 aa18.76■□□□□ 0.59
SMAD6-201ENST00000288840 APOBRQ0VD83 1088 aa18.76■□□□□ 0.59
SMAD6-201ENST00000288840 CCDC144CPQ8IYA2 1237 aa18.76■□□□□ 0.59
SMAD6-201ENST00000288840 PDE4CQ08493 712 aa18.76■□□□□ 0.59
SMAD6-201ENST00000288840 STK38Q15208 465 aa18.76■□□□□ 0.59
SMAD6-201ENST00000288840 ZNF589Q86UQ0 364 aaPredicted RBP18.76■□□□□ 0.59
SMAD6-201ENST00000288840 BIN1O00499 593 aa18.75■□□□□ 0.59
SMAD6-201ENST00000288840 TPD52L1Q16890 204 aaPredicted RBP18.75■□□□□ 0.59
SMAD6-201ENST00000288840 CCDC158Q5M9N0 1113 aa18.75■□□□□ 0.59
SMAD6-201ENST00000288840 SASH1O94885 1247 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms