RNA–Protein interactions for RNA: ENST00000285814.8

NIFK-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIFK, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-201ENST00000285814 BICC1Q9H694 974 aaKnown RBP22.85■■□□□ 1.25
NIFK-201ENST00000285814 NUCB1Q02818 461 aa22.85■■□□□ 1.25
NIFK-201ENST00000285814 CLEC4GQ6UXB4 293 aa22.84■■□□□ 1.25
NIFK-201ENST00000285814 SRGAP3O43295 1099 aa22.83■■□□□ 1.25
NIFK-201ENST00000285814 PCCAP05165 728 aaPredicted RBP22.83■■□□□ 1.25
NIFK-201ENST00000285814 GPTP24298 496 aa22.83■■□□□ 1.25
NIFK-201ENST00000285814 AMIGO3Q86WK7 504 aa22.83■■□□□ 1.25
NIFK-201ENST00000285814 JARID2Q92833 1246 aaPredicted RBP22.83■■□□□ 1.25
NIFK-201ENST00000285814 ZNF652Q9Y2D9 606 aa22.83■■□□□ 1.25
NIFK-201ENST00000285814 UBN2Q6ZU65 1347 aa22.83■■□□□ 1.25
NIFK-201ENST00000285814 RABL6Q3YEC7 729 aaPredicted RBP22.82■■□□□ 1.24
NIFK-201ENST00000285814 ZBTB38Q8NAP3 1195 aaPredicted RBP22.82■■□□□ 1.24
NIFK-201ENST00000285814 NARFQ9UHQ1 456 aa22.82■■□□□ 1.24
NIFK-201ENST00000285814 EPHA10Q5JZY3 1008 aa22.82■■□□□ 1.24
NIFK-201ENST00000285814 ADRA2BP18089 450 aa22.81■■□□□ 1.24
NIFK-201ENST00000285814 SMIM5Q71RC9 77 aa22.81■■□□□ 1.24
NIFK-201ENST00000285814 CHD1LQ86WJ1 897 aa22.8■■□□□ 1.24
NIFK-201ENST00000285814 ARHGEF1Q92888 912 aaKnown RBP22.8■■□□□ 1.24
NIFK-201ENST00000285814 CDHR2Q9BYE9 1310 aa22.8■■□□□ 1.24
NIFK-201ENST00000285814 PARP10Q53GL7 1025 aa22.79■■□□□ 1.24
NIFK-201ENST00000285814 ANKRD45Q5TZF3 282 aa22.79■■□□□ 1.24
NIFK-201ENST00000285814 FOXO4P98177 505 aa22.79■■□□□ 1.24
NIFK-201ENST00000285814 RTL5Q5HYW3 569 aaPredicted RBP22.79■■□□□ 1.24
NIFK-201ENST00000285814 BCL2L12Q9HB09 334 aa22.79■■□□□ 1.24
NIFK-201ENST00000285814 USP42Q9H9J4 1324 aaKnown RBP22.78■■□□□ 1.24
NIFK-201ENST00000285814 TRAPPC3LQ5T215 181 aa22.78■■□□□ 1.24
NIFK-201ENST00000285814 FAM89AQ96GI7 184 aa22.78■■□□□ 1.24
NIFK-201ENST00000285814 PLA2G12BQ9BX93 195 aa22.78■■□□□ 1.24
NIFK-201ENST00000285814 ZPR1O75312 459 aa22.77■■□□□ 1.24
NIFK-201ENST00000285814 SSFA2P28290 1259 aa22.77■■□□□ 1.24
NIFK-201ENST00000285814 RGS3P49796 1198 aa22.77■■□□□ 1.24
NIFK-201ENST00000285814 USPL1Q5W0Q7 1092 aa22.77■■□□□ 1.24
NIFK-201ENST00000285814 NIP7Q9Y221 180 aaKnown RBP eCLIP22.77■■□□□ 1.24
NIFK-201ENST00000285814 EXOC6BQ9Y2D4 811 aa22.77■■□□□ 1.24
NIFK-201ENST00000285814 COL24A1Q17RW2 1714 aa22.77■■□□□ 1.24
NIFK-201ENST00000285814 LNPKQ9C0E8 428 aa22.77■■□□□ 1.23
NIFK-201ENST00000285814 SRP68Q9UHB9 627 aaKnown RBP22.77■■□□□ 1.23
NIFK-201ENST00000285814 TRMT112Q9UI30 125 aaKnown RBP22.77■■□□□ 1.23
NIFK-201ENST00000285814 NOP58Q9Y2X3 529 aaKnown RBP22.77■■□□□ 1.23
NIFK-201ENST00000285814 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.76■■□□□ 1.23
NIFK-201ENST00000285814 PHF14O94880 888 aa22.76■■□□□ 1.23
NIFK-201ENST00000285814 PDE4AP27815 886 aa22.76■■□□□ 1.23
NIFK-201ENST00000285814 RFC4P35249 363 aa22.76■■□□□ 1.23
NIFK-201ENST00000285814 SUSD4Q5VX71 490 aa22.76■■□□□ 1.23
NIFK-201ENST00000285814 LAMB2P55268 1798 aa22.75■■□□□ 1.23
NIFK-201ENST00000285814 MYH3P11055 1940 aa22.75■■□□□ 1.23
NIFK-201ENST00000285814 SURF6O75683 361 aaKnown RBP22.74■■□□□ 1.23
NIFK-201ENST00000285814 LMBR1LQ6UX01 489 aa22.74■■□□□ 1.23
NIFK-201ENST00000285814 UTP14AQ9BVJ6 771 aaKnown RBP22.74■■□□□ 1.23
NIFK-201ENST00000285814 TUBGCP6Q96RT7 1819 aa22.74■■□□□ 1.23
NIFK-201ENST00000285814 RAB11FIP3O75154 756 aa22.74■■□□□ 1.23
NIFK-201ENST00000285814 NTSR2O95665 410 aa22.74■■□□□ 1.23
NIFK-201ENST00000285814 AKT1S1Q96B36 256 aa22.74■■□□□ 1.23
NIFK-201ENST00000285814 RFX5P48382 616 aaPredicted RBP22.73■■□□□ 1.23
NIFK-201ENST00000285814 HSP90AB4PQ58FF6 505 aa22.73■■□□□ 1.23
NIFK-201ENST00000285814 TBC1D9BQ66K14 1250 aa22.73■■□□□ 1.23
NIFK-201ENST00000285814 SYNE4Q8N205 404 aa22.73■■□□□ 1.23
NIFK-201ENST00000285814 CAMKK2Q96RR4 588 aa22.73■■□□□ 1.23
NIFK-201ENST00000285814 SH3TC1Q8TE82 1336 aa22.72■■□□□ 1.23
NIFK-201ENST00000285814 DDX60Q8IY21 1712 aaKnown RBP22.72■■□□□ 1.23
NIFK-201ENST00000285814 IRS4O14654 1257 aaPredicted RBP22.72■■□□□ 1.23
NIFK-201ENST00000285814 ZNF827Q17R98 1081 aa22.72■■□□□ 1.23
NIFK-201ENST00000285814 LRRCC1Q9C099 1032 aa22.72■■□□□ 1.23
NIFK-201ENST00000285814 ZBTB47Q9UFB7 747 aaPredicted RBP22.71■■□□□ 1.23
NIFK-201ENST00000285814 PA2G4Q9UQ80 394 aaKnown RBP22.71■■□□□ 1.23
NIFK-201ENST00000285814 APBB1O00213 710 aa22.71■■□□□ 1.23
NIFK-201ENST00000285814 CSF1RP07333 972 aa22.71■■□□□ 1.23
NIFK-201ENST00000285814 COPRSQ9NQ92 184 aa22.71■■□□□ 1.23
NIFK-201ENST00000285814 SMARCA5O60264 1052 aaPredicted RBP22.69■■□□□ 1.22
NIFK-201ENST00000285814 PDE8AO60658 829 aa22.69■■□□□ 1.22
NIFK-201ENST00000285814 PTPN12Q05209 780 aaKnown RBP22.69■■□□□ 1.22
NIFK-201ENST00000285814 EN1Q05925 392 aaPredicted RBP22.69■■□□□ 1.22
NIFK-201ENST00000285814 CTSWP56202 376 aa22.68■■□□□ 1.22
NIFK-201ENST00000285814 EZH2Q15910 746 aaKnown RBP22.68■■□□□ 1.22
NIFK-201ENST00000285814 KIF1BPQ96EK5 621 aa22.68■■□□□ 1.22
NIFK-201ENST00000285814 SETDB2Q96T68 719 aa22.68■■□□□ 1.22
NIFK-201ENST00000285814 TFCP2L1Q9NZI6 479 aa22.68■■□□□ 1.22
NIFK-201ENST00000285814 CHMP3Q9Y3E7 222 aa22.68■■□□□ 1.22
NIFK-201ENST00000285814 FAM177BA6PVY3 158 aa22.68■■□□□ 1.22
NIFK-201ENST00000285814 SF3B2Q13435 895 aaKnown RBP22.68■■□□□ 1.22
NIFK-201ENST00000285814 ERC1Q8IUD2 1116 aa22.68■■□□□ 1.22
NIFK-201ENST00000285814 RHPN1Q8TCX5 695 aa22.68■■□□□ 1.22
NIFK-201ENST00000285814 HSP90B1P14625 803 aaKnown RBP22.67■■□□□ 1.22
NIFK-201ENST00000285814 BAG6P46379 1132 aa22.67■■□□□ 1.22
NIFK-201ENST00000285814 BICDL1Q6ZP65 573 aa22.67■■□□□ 1.22
NIFK-201ENST00000285814 TTLL11Q8NHH1 800 aa22.67■■□□□ 1.22
NIFK-201ENST00000285814 KLHDC4Q8TBB5 520 aa22.67■■□□□ 1.22
NIFK-201ENST00000285814 GYS1P13807 737 aa22.66■■□□□ 1.22
NIFK-201ENST00000285814 OS9Q13438 667 aaPredicted RBP22.66■■□□□ 1.22
NIFK-201ENST00000285814 NYXQ9GZU5 481 aa22.66■■□□□ 1.22
NIFK-201ENST00000285814 G3BP1Q13283 466 aaKnown RBP eCLIP22.65■■□□□ 1.22
NIFK-201ENST00000285814 FAM161AQ3B820 660 aa22.65■■□□□ 1.22
NIFK-201ENST00000285814 NUTM1Q86Y26 1132 aa22.65■■□□□ 1.22
NIFK-201ENST00000285814 FLAD1Q8NFF5 587 aa22.65■■□□□ 1.22
NIFK-201ENST00000285814 QSER1Q2KHR3 1735 aa22.65■■□□□ 1.22
NIFK-201ENST00000285814 C16orf71Q8IYS4 520 aaPredicted RBP22.65■■□□□ 1.22
NIFK-201ENST00000285814 CARMIL3Q8ND23 1372 aa22.64■■□□□ 1.22
NIFK-201ENST00000285814 HCLS1P14317 486 aaPredicted RBP22.64■■□□□ 1.21
NIFK-201ENST00000285814 NFIXQ14938 502 aa22.64■■□□□ 1.21
NIFK-201ENST00000285814 PLEKHM2Q8IWE5 1019 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms