RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 SSRP1Q08945 709 aaKnown RBP13.13□□□□□ -0.31
USP6NL-201ENST00000277575 C16orf71Q8IYS4 520 aaPredicted RBP13.13□□□□□ -0.31
USP6NL-201ENST00000277575 COL17A1Q9UMD9 1497 aaPredicted RBP13.13□□□□□ -0.31
USP6NL-201ENST00000277575 CCDC194A0A1B0GVG4 234 aa13.13□□□□□ -0.31
USP6NL-201ENST00000277575 RNMTO43148 476 aaKnown RBP13.13□□□□□ -0.31
USP6NL-201ENST00000277575 NOM1Q5C9Z4 860 aaKnown RBP13.13□□□□□ -0.31
USP6NL-201ENST00000277575 CDR1P51861 262 aa13.13□□□□□ -0.31
USP6NL-201ENST00000277575 PDE4BQ07343 736 aa13.13□□□□□ -0.31
USP6NL-201ENST00000277575 DZIP3Q86Y13 1208 aaKnown RBP13.13□□□□□ -0.31
USP6NL-201ENST00000277575 DCTPP1Q9H773 170 aa13.13□□□□□ -0.31
USP6NL-201ENST00000277575 STX6O43752 255 aa13.12□□□□□ -0.31
USP6NL-201ENST00000277575 GJB2P29033 226 aa13.12□□□□□ -0.31
USP6NL-201ENST00000277575 NLRP5P59047 1200 aa13.12□□□□□ -0.31
USP6NL-201ENST00000277575 CFAP100Q494V2 611 aa13.12□□□□□ -0.31
USP6NL-201ENST00000277575 BRF1Q92994 677 aa13.12□□□□□ -0.31
USP6NL-201ENST00000277575 GDPD2Q9HCC8 539 aa13.12□□□□□ -0.31
USP6NL-201ENST00000277575 DDX21Q9NR30 783 aaKnown RBP eCLIP13.12□□□□□ -0.31
USP6NL-201ENST00000277575 ZBTB40Q9NUA8 1239 aa13.12□□□□□ -0.31
USP6NL-201ENST00000277575 ST5P78524 1137 aa13.12□□□□□ -0.31
USP6NL-201ENST00000277575 CEP85Q6P2H3 762 aa13.12□□□□□ -0.31
USP6NL-201ENST00000277575 NPC1L1Q9UHC9 1359 aa13.12□□□□□ -0.31
USP6NL-201ENST00000277575 PPFIA3O75145 1194 aa13.12□□□□□ -0.31
USP6NL-201ENST00000277575 ZNF771Q7L3S4 317 aaPredicted RBP13.12□□□□□ -0.31
USP6NL-201ENST00000277575 CCDC144CPQ8IYA2 1237 aa13.12□□□□□ -0.31
USP6NL-201ENST00000277575 PHAXQ9H814 394 aaKnown RBP13.12□□□□□ -0.31
USP6NL-201ENST00000277575 IL13P35225 146 aa13.11□□□□□ -0.31
USP6NL-201ENST00000277575 CCDC183Q5T5S1 534 aa13.11□□□□□ -0.31
USP6NL-201ENST00000277575 ESYT1Q9BSJ8 1104 aa13.11□□□□□ -0.31
USP6NL-201ENST00000277575 CEP170Q5SW79 1584 aa13.11□□□□□ -0.31
USP6NL-201ENST00000277575 MCM5P33992 734 aa13.11□□□□□ -0.31
USP6NL-201ENST00000277575 RAB11FIP4Q86YS3 637 aa13.11□□□□□ -0.31
USP6NL-201ENST00000277575 FAM177A1Q8N128 213 aaPredicted RBP13.11□□□□□ -0.31
USP6NL-201ENST00000277575 TCEANC2Q96MN5 208 aa13.11□□□□□ -0.31
USP6NL-201ENST00000277575 ANO10Q9NW15 660 aa13.11□□□□□ -0.31
USP6NL-201ENST00000277575 BTG4Q9NY30 223 aa13.11□□□□□ -0.31
USP6NL-201ENST00000277575 KIF5BP33176 963 aa13.11□□□□□ -0.31
USP6NL-201ENST00000277575 EIF5P55010 431 aaKnown RBP13.11□□□□□ -0.31
USP6NL-201ENST00000277575 RBM8AQ9Y5S9 174 aaKnown RBP13.11□□□□□ -0.31
USP6NL-201ENST00000277575 ABCA5Q8WWZ7 1642 aa13.11□□□□□ -0.31
USP6NL-201ENST00000277575 CYP7A1P22680 504 aa13.11□□□□□ -0.31
USP6NL-201ENST00000277575 KLHL10Q6JEL2 608 aa13.11□□□□□ -0.31
USP6NL-201ENST00000277575 UTP14AQ9BVJ6 771 aaKnown RBP13.11□□□□□ -0.31
USP6NL-201ENST00000277575 RAB34Q9BZG1 259 aa13.11□□□□□ -0.31
USP6NL-201ENST00000277575 CRNKL1Q9BZJ0 848 aaKnown RBP13.11□□□□□ -0.31
USP6NL-201ENST00000277575 EDC4Q6P2E9 1401 aaKnown RBP13.1□□□□□ -0.31
USP6NL-201ENST00000277575 METAP2P50579 478 aaKnown RBP eCLIP13.1□□□□□ -0.31
USP6NL-201ENST00000277575 SLC9C2Q5TAH2 1124 aa13.1□□□□□ -0.31
USP6NL-201ENST00000277575 TMX3Q96JJ7 454 aa13.1□□□□□ -0.31
USP6NL-201ENST00000277575 STX8Q9UNK0 236 aa13.1□□□□□ -0.31
USP6NL-201ENST00000277575 MCMDC2Q4G0Z9 681 aa13.1□□□□□ -0.31
USP6NL-201ENST00000277575 SMC5Q8IY18 1101 aa13.1□□□□□ -0.31
USP6NL-201ENST00000277575 RDXP35241 583 aaKnown RBP13.09□□□□□ -0.31
USP6NL-201ENST00000277575 TPTE2Q6XPS3 522 aa13.09□□□□□ -0.31
USP6NL-201ENST00000277575 SOS1Q07889 1333 aaPredicted RBP13.09□□□□□ -0.31
USP6NL-201ENST00000277575 SBNO1A3KN83 1393 aa13.09□□□□□ -0.31
USP6NL-201ENST00000277575 FSIP1Q8NA03 581 aa13.09□□□□□ -0.31
USP6NL-201ENST00000277575 PCDH11XQ9BZA7 1347 aa13.09□□□□□ -0.31
USP6NL-201ENST00000277575 PCDH11YQ9BZA8 1340 aa13.09□□□□□ -0.31
USP6NL-201ENST00000277575 ESPNB1AK53 854 aa13.09□□□□□ -0.31
USP6NL-201ENST00000277575 TNIP1Q15025 636 aa13.09□□□□□ -0.31
USP6NL-201ENST00000277575 SLC4A8Q2Y0W8 1093 aa13.09□□□□□ -0.31
USP6NL-201ENST00000277575 CKAP2LQ8IYA6 745 aa13.09□□□□□ -0.31
USP6NL-201ENST00000277575 ERCC4Q92889 916 aaPredicted RBP13.09□□□□□ -0.31
USP6NL-201ENST00000277575 KAT14Q9H8E8 782 aa13.09□□□□□ -0.31
USP6NL-201ENST00000277575 VAT1LQ9HCJ6 419 aa13.09□□□□□ -0.31
USP6NL-201ENST00000277575 KLF18A0A0U1RQI7 1052 aa13.09□□□□□ -0.31
USP6NL-201ENST00000277575 IRS4O14654 1257 aaPredicted RBP13.09□□□□□ -0.31
USP6NL-201ENST00000277575 HLA-DOAP06340 250 aa13.09□□□□□ -0.31
USP6NL-201ENST00000277575 ZNF790Q6PG37 636 aa13.09□□□□□ -0.31
USP6NL-201ENST00000277575 G2E3Q7L622 706 aa13.09□□□□□ -0.31
USP6NL-201ENST00000277575 NECAB1Q8N987 351 aa13.09□□□□□ -0.31
USP6NL-201ENST00000277575 CCDC112Q8NEF3 446 aa13.09□□□□□ -0.31
USP6NL-201ENST00000277575 LRRC2Q9BYS8 371 aa13.09□□□□□ -0.31
USP6NL-201ENST00000277575 ANAPC15P60006 121 aa13.08□□□□□ -0.32
USP6NL-201ENST00000277575 FEZ1Q99689 392 aa13.08□□□□□ -0.32
USP6NL-201ENST00000277575 MAST1Q9Y2H9 1570 aa13.08□□□□□ -0.32
USP6NL-201ENST00000277575 TXLNBQ8N3L3 684 aa13.08□□□□□ -0.32
USP6NL-201ENST00000277575 IL27Q8NEV9 243 aa13.08□□□□□ -0.32
USP6NL-201ENST00000277575 HELBQ8NG08 1087 aaPredicted RBP13.08□□□□□ -0.32
USP6NL-201ENST00000277575 SLC26A6Q9BXS9 759 aa13.08□□□□□ -0.32
USP6NL-201ENST00000277575 DDX19AQ9NUU7 478 aaKnown RBP13.08□□□□□ -0.32
USP6NL-201ENST00000277575 RTCBQ9Y3I0 505 aaKnown RBP13.08□□□□□ -0.32
USP6NL-201ENST00000277575 CTAGE5O15320 804 aa13.08□□□□□ -0.32
USP6NL-201ENST00000277575 BAG4O95429 457 aaKnown RBP13.08□□□□□ -0.32
USP6NL-201ENST00000277575 CNNM3Q8NE01 707 aa13.08□□□□□ -0.32
USP6NL-201ENST00000277575 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.08□□□□□ -0.326e-7■■■■■ 62.1
USP6NL-201ENST00000277575 MYO6Q9UM54 1294 aa13.08□□□□□ -0.32
USP6NL-201ENST00000277575 TMEM266Q2M3C6 531 aa13.07□□□□□ -0.32
USP6NL-201ENST00000277575 CCDC12Q8WUD4 166 aaPredicted RBP13.07□□□□□ -0.32
USP6NL-201ENST00000277575 CUL5Q93034 780 aa13.07□□□□□ -0.32
USP6NL-201ENST00000277575 CABP5Q9NP86 173 aa13.07□□□□□ -0.32
USP6NL-201ENST00000277575 TTC41PQ6P2S7 1318 aa13.07□□□□□ -0.32
USP6NL-201ENST00000277575 WTAPQ15007 396 aa13.07□□□□□ -0.32
USP6NL-201ENST00000277575 NAA16Q6N069 864 aaPredicted RBP13.07□□□□□ -0.32
USP6NL-201ENST00000277575 TMEM2Q9UHN6 1383 aa13.07□□□□□ -0.32
USP6NL-201ENST00000277575 CHL1O00533 1208 aa13.07□□□□□ -0.32
USP6NL-201ENST00000277575 GSTO1P78417 241 aa13.07□□□□□ -0.32
USP6NL-201ENST00000277575 PAG1Q9NWQ8 432 aa13.07□□□□□ -0.32
USP6NL-201ENST00000277575 SLC4A4Q9Y6R1 1079 aa13.07□□□□□ -0.32
USP6NL-201ENST00000277575 LMTK3Q96Q04 1460 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms