RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 RNF17Q9BXT8 1623 aaKnown RBP16.93■□□□□ 0.3
TMEM47-201ENST00000275954 SLC4A8Q2Y0W8 1093 aa16.92■□□□□ 0.3
TMEM47-201ENST00000275954 MARCH6O60337 910 aa16.92■□□□□ 0.3
TMEM47-201ENST00000275954 VSIG10Q8N0Z9 540 aa16.92■□□□□ 0.3
TMEM47-201ENST00000275954 CNPY2Q9Y2B0 182 aa16.92■□□□□ 0.3
TMEM47-201ENST00000275954 ALDH1L1O75891 902 aa16.91■□□□□ 0.3
TMEM47-201ENST00000275954 CD2BP2O95400 341 aaKnown RBP16.91■□□□□ 0.3
TMEM47-201ENST00000275954 LETM1O95202 739 aaPredicted RBP16.91■□□□□ 0.3
TMEM47-201ENST00000275954 LDHAL6AQ6ZMR3 332 aa16.91■□□□□ 0.3
TMEM47-201ENST00000275954 ZSCAN30Q86W11 494 aa16.91■□□□□ 0.3
TMEM47-201ENST00000275954 HOMER1Q86YM7 354 aa16.91■□□□□ 0.3
TMEM47-201ENST00000275954 CWC25Q9NXE8 425 aaPredicted RBP16.91■□□□□ 0.3
TMEM47-201ENST00000275954 RTL1A6NKG5 1358 aa16.91■□□□□ 0.3
TMEM47-201ENST00000275954 BRF1Q92994 677 aa16.91■□□□□ 0.3
TMEM47-201ENST00000275954 APBA3O96018 575 aa16.91■□□□□ 0.3
TMEM47-201ENST00000275954 AK2P54819 239 aa16.91■□□□□ 0.3
TMEM47-201ENST00000275954 NMIQ13287 307 aaPredicted RBP16.91■□□□□ 0.3
TMEM47-201ENST00000275954 PIBF1Q8WXW3 757 aa16.91■□□□□ 0.3
TMEM47-201ENST00000275954 SH2B1Q9NRF2 756 aaPredicted RBP16.91■□□□□ 0.3
TMEM47-201ENST00000275954 UNC13BO14795 1591 aa16.9■□□□□ 0.3
TMEM47-201ENST00000275954 CROCC2H7BZ55 1655 aa16.9■□□□□ 0.3
TMEM47-201ENST00000275954 ZNF790Q6PG37 636 aa16.9■□□□□ 0.3
TMEM47-201ENST00000275954 ZNF622Q969S3 477 aaKnown RBP eCLIP16.9■□□□□ 0.3
TMEM47-201ENST00000275954 U3KPZ7 1027 aaPredicted RBP16.9■□□□□ 0.3
TMEM47-201ENST00000275954 KIF1BO60333 1816 aa16.9■□□□□ 0.3
TMEM47-201ENST00000275954 ADGRL3Q9HAR2 1447 aa16.9■□□□□ 0.3
TMEM47-201ENST00000275954 HCLS1P14317 486 aaPredicted RBP16.9■□□□□ 0.3
TMEM47-201ENST00000275954 GIMAP6Q6P9H5 292 aa16.9■□□□□ 0.3
TMEM47-201ENST00000275954 FILIP1Q7Z7B0 1213 aa16.9■□□□□ 0.3
TMEM47-201ENST00000275954 ARHGAP31Q2M1Z3 1444 aa16.9■□□□□ 0.3
TMEM47-201ENST00000275954 FAM89AQ96GI7 184 aa16.9■□□□□ 0.3
TMEM47-201ENST00000275954 LRP2BPQ9P2M1 347 aa16.9■□□□□ 0.3
TMEM47-201ENST00000275954 TET3O43151 1660 aa16.9■□□□□ 0.3
TMEM47-201ENST00000275954 EIF4A1P60842 406 aaKnown RBP16.89■□□□□ 0.29
TMEM47-201ENST00000275954 PKP1Q13835 747 aa16.89■□□□□ 0.29
TMEM47-201ENST00000275954 SMC2O95347 1197 aa16.89■□□□□ 0.29
TMEM47-201ENST00000275954 ZNF396Q96N95 335 aaPredicted RBP16.89■□□□□ 0.29
TMEM47-201ENST00000275954 DDX21Q9NR30 783 aaKnown RBP eCLIP16.89■□□□□ 0.29
TMEM47-201ENST00000275954 NIP7Q9Y221 180 aaKnown RBP eCLIP16.89■□□□□ 0.29
TMEM47-201ENST00000275954 E9PCH4 1651 aa16.89■□□□□ 0.29
TMEM47-201ENST00000275954 ZNF853P0CG23 659 aa16.89■□□□□ 0.29
TMEM47-201ENST00000275954 TDO2P48775 406 aa16.89■□□□□ 0.29
TMEM47-201ENST00000275954 SART3Q15020 963 aaKnown RBP16.89■□□□□ 0.29
TMEM47-201ENST00000275954 IMMTQ16891 758 aaKnown RBP16.89■□□□□ 0.29
TMEM47-201ENST00000275954 VPS53Q5VIR6 699 aa16.89■□□□□ 0.29
TMEM47-201ENST00000275954 USP48Q86UV5 1035 aa16.89■□□□□ 0.29
TMEM47-201ENST00000275954 CERKQ8TCT0 537 aa16.89■□□□□ 0.29
TMEM47-201ENST00000275954 DCAF5Q96JK2 942 aa16.89■□□□□ 0.29
TMEM47-201ENST00000275954 PPRC1Q5VV67 1664 aaKnown RBP16.89■□□□□ 0.29
TMEM47-201ENST00000275954 CHST3Q7LGC8 479 aa16.88■□□□□ 0.29
TMEM47-201ENST00000275954 CCNL1Q9UK58 526 aaPredicted RBP16.88■□□□□ 0.29
TMEM47-201ENST00000275954 TIMM10P62072 90 aa16.88■□□□□ 0.29
TMEM47-201ENST00000275954 MAP3K11Q16584 847 aa16.88■□□□□ 0.29
TMEM47-201ENST00000275954 HSP90AB3PQ58FF7 597 aa16.88■□□□□ 0.29
TMEM47-201ENST00000275954 NEK1Q96PY6 1258 aa16.88■□□□□ 0.29
TMEM47-201ENST00000275954 NOL10Q9BSC4 688 aaKnown RBP16.88■□□□□ 0.29
TMEM47-201ENST00000275954 CTNNA3Q9UI47 895 aa16.88■□□□□ 0.29
TMEM47-201ENST00000275954 AIDAQ96BJ3 306 aa16.88■□□□□ 0.29
TMEM47-201ENST00000275954 DNM1Q05193 864 aaKnown RBP16.87■□□□□ 0.29
TMEM47-201ENST00000275954 EDC3Q96F86 508 aaKnown RBP16.87■□□□□ 0.29
TMEM47-201ENST00000275954 RAI14Q9P0K7 980 aa16.87■□□□□ 0.29
TMEM47-201ENST00000275954 ANAPC15P60006 121 aa16.87■□□□□ 0.29
TMEM47-201ENST00000275954 TFCP2Q12800 502 aa16.87■□□□□ 0.29
TMEM47-201ENST00000275954 PALD1Q9ULE6 856 aa16.87■□□□□ 0.29
TMEM47-201ENST00000275954 CCDC183Q5T5S1 534 aa16.86■□□□□ 0.29
TMEM47-201ENST00000275954 CCDC144CPQ8IYA2 1237 aa16.86■□□□□ 0.29
TMEM47-201ENST00000275954 FAM227BQ96M60 508 aa16.86■□□□□ 0.29
TMEM47-201ENST00000275954 CFAP45Q9UL16 551 aa16.86■□□□□ 0.29
TMEM47-201ENST00000275954 NBPF5PQ86XG9 351 aaPredicted RBP16.86■□□□□ 0.29
TMEM47-201ENST00000275954 DZIP3Q86Y13 1208 aaKnown RBP16.86■□□□□ 0.29
TMEM47-201ENST00000275954 ANKIB1Q9P2G1 1089 aa16.86■□□□□ 0.29
TMEM47-201ENST00000275954 USP6P35125 1406 aa16.86■□□□□ 0.29
TMEM47-201ENST00000275954 MINDY4BA8MYZ0 360 aa16.86■□□□□ 0.29
TMEM47-201ENST00000275954 ZSCAN22P10073 491 aaPredicted RBP16.86■□□□□ 0.29
TMEM47-201ENST00000275954 FAM173BQ6P4H8 233 aa16.86■□□□□ 0.29
TMEM47-201ENST00000275954 RBM5P52756 815 aaKnown RBP eCLIP16.86■□□□□ 0.29
TMEM47-201ENST00000275954 PDILTQ8N807 584 aa16.86■□□□□ 0.29
TMEM47-201ENST00000275954 UNC5CLQ8IV45 518 aa16.85■□□□□ 0.29
TMEM47-201ENST00000275954 SUCLG2Q96I99 432 aa16.85■□□□□ 0.29
TMEM47-201ENST00000275954 KCNQ2O43526 872 aa16.85■□□□□ 0.29
TMEM47-201ENST00000275954 AKAP2Q9Y2D5 859 aa16.85■□□□□ 0.29
TMEM47-201ENST00000275954 MADDQ8WXG6 1647 aa16.85■□□□□ 0.29
TMEM47-201ENST00000275954 PROSER3Q2NL68 480 aa16.85■□□□□ 0.29
TMEM47-201ENST00000275954 ZNF830Q96NB3 372 aaPredicted RBP16.85■□□□□ 0.29
TMEM47-201ENST00000275954 C6orf229H3BNL8 230 aa16.84■□□□□ 0.29
TMEM47-201ENST00000275954 NAT10Q9H0A0 1025 aaKnown RBP16.84■□□□□ 0.29
TMEM47-201ENST00000275954 ERBB3P21860 1342 aa16.84■□□□□ 0.29
TMEM47-201ENST00000275954 SPATA31A3Q5VYP0 1347 aa16.84■□□□□ 0.29
TMEM47-201ENST00000275954 RIMS1Q86UR5 1692 aaKnown RBP16.84■□□□□ 0.29
TMEM47-201ENST00000275954 CLSTN1O94985 981 aa16.84■□□□□ 0.29
TMEM47-201ENST00000275954 POLR3DP05423 398 aaPredicted RBP16.84■□□□□ 0.29
TMEM47-201ENST00000275954 CCDC129Q6ZRS4 1044 aa16.84■□□□□ 0.29
TMEM47-201ENST00000275954 AMOTL1Q8IY63 956 aa16.84■□□□□ 0.29
TMEM47-201ENST00000275954 NACAP1Q9BZK3 213 aa16.84■□□□□ 0.29
TMEM47-201ENST00000275954 SCAND2PQ9GZW5 306 aaPredicted RBP16.84■□□□□ 0.29
TMEM47-201ENST00000275954 CCDC69A6NI79 296 aa16.84■□□□□ 0.29
TMEM47-201ENST00000275954 ARHGEF10O15013 1369 aa16.84■□□□□ 0.29
TMEM47-201ENST00000275954 ALKQ9UM73 1620 aa16.83■□□□□ 0.29
TMEM47-201ENST00000275954 ZNF213O14771 459 aa16.83■□□□□ 0.28
TMEM47-201ENST00000275954 CREB3L3Q68CJ9 461 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms