RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 TMEM259Q4ZIN3 620 aa14.19□□□□□ -0.14
LRTM1-201ENST00000273286 ADAM32Q8TC27 787 aa14.19□□□□□ -0.14
LRTM1-201ENST00000273286 KCTD15Q96SI1 283 aaPredicted RBP14.19□□□□□ -0.14
LRTM1-201ENST00000273286 DLC1Q96QB1 1528 aa14.18□□□□□ -0.14
LRTM1-201ENST00000273286 UPP2O95045 317 aa14.18□□□□□ -0.14
LRTM1-201ENST00000273286 XPCQ01831 940 aaPredicted RBP14.18□□□□□ -0.14
LRTM1-201ENST00000273286 LCE2CQ5TA81 110 aa14.18□□□□□ -0.14
LRTM1-201ENST00000273286 LINC00528Q8N1L1 170 aa14.18□□□□□ -0.14
LRTM1-201ENST00000273286 GJD4Q96KN9 370 aaPredicted RBP14.18□□□□□ -0.14
LRTM1-201ENST00000273286 SOBPA7XYQ1 873 aa14.17□□□□□ -0.14
LRTM1-201ENST00000273286 BMP2P12643 396 aa14.17□□□□□ -0.14
LRTM1-201ENST00000273286 KRT28Q7Z3Y7 464 aa14.17□□□□□ -0.14
LRTM1-201ENST00000273286 EIF3AQ14152 1382 aaKnown RBP14.17□□□□□ -0.14
LRTM1-201ENST00000273286 TNS3Q68CZ2 1445 aa14.17□□□□□ -0.14
LRTM1-201ENST00000273286 ANKARQ7Z5J8 1434 aa14.17□□□□□ -0.14
LRTM1-201ENST00000273286 PPP1R26Q5T8A7 1209 aaPredicted RBP14.16□□□□□ -0.14
LRTM1-201ENST00000273286 UNC5CLQ8IV45 518 aa14.16□□□□□ -0.14
LRTM1-201ENST00000273286 SBNO1A3KN83 1393 aa14.16□□□□□ -0.14
LRTM1-201ENST00000273286 ARHGEF10O15013 1369 aa14.16□□□□□ -0.14
LRTM1-201ENST00000273286 SLIT2O94813 1529 aa14.16□□□□□ -0.14
LRTM1-201ENST00000273286 CFAP70Q5T0N1 1121 aa14.15□□□□□ -0.14
LRTM1-201ENST00000273286 SLC16A10Q8TF71 515 aa14.15□□□□□ -0.14
LRTM1-201ENST00000273286 TRIM34Q9BYJ4 488 aa14.15□□□□□ -0.14
LRTM1-201ENST00000273286 USP32Q8NFA0 1604 aa14.15□□□□□ -0.14
LRTM1-201ENST00000273286 ADGRB2O60241 1585 aa14.15□□□□□ -0.14
LRTM1-201ENST00000273286 PRAM1Q96QH2 718 aa14.15□□□□□ -0.14
LRTM1-201ENST00000273286 RAB3GAP2Q9H2M9 1393 aa14.15□□□□□ -0.14
LRTM1-201ENST00000273286 PGPEP1Q9NXJ5 209 aa14.15□□□□□ -0.14
LRTM1-201ENST00000273286 POGKQ9P215 609 aa14.15□□□□□ -0.14
LRTM1-201ENST00000273286 VEGFBP49765 207 aa14.14□□□□□ -0.15
LRTM1-201ENST00000273286 INTS6LQ5JSJ4 861 aaKnown RBP14.14□□□□□ -0.15
LRTM1-201ENST00000273286 WIPF1O43516 503 aa14.12□□□□□ -0.15
LRTM1-201ENST00000273286 MAN1A2O60476 641 aa14.12□□□□□ -0.15
LRTM1-201ENST00000273286 EP400Q96L91 3159 aa14.12□□□□□ -0.15
LRTM1-201ENST00000273286 ADGRB1O14514 1584 aa14.12□□□□□ -0.15
LRTM1-201ENST00000273286 RALGAPBQ86X10 1494 aa14.11□□□□□ -0.15
LRTM1-201ENST00000273286 NWD2Q9ULI1 1742 aa14.11□□□□□ -0.15
LRTM1-201ENST00000273286 DHX9Q08211 1270 aaKnown RBP14.11□□□□□ -0.15
LRTM1-201ENST00000273286 NBPF20Q3BBV1 942 aa14.11□□□□□ -0.15
LRTM1-201ENST00000273286 NPAS3Q8IXF0 933 aa14.11□□□□□ -0.15
LRTM1-201ENST00000273286 TSEN34Q9BSV6 310 aaKnown RBP14.11□□□□□ -0.15
LRTM1-201ENST00000273286 RGPD8O14715 1765 aaPredicted RBP14.11□□□□□ -0.15
LRTM1-201ENST00000273286 GPRASP1Q5JY77 1395 aa14.1□□□□□ -0.15
LRTM1-201ENST00000273286 CBLBQ13191 982 aa14.1□□□□□ -0.15
LRTM1-201ENST00000273286 VPS72Q15906 364 aa14.1□□□□□ -0.15
LRTM1-201ENST00000273286 SAFB2Q14151 953 aaKnown RBP eCLIP14.09□□□□□ -0.15
LRTM1-201ENST00000273286 DZIP3Q86Y13 1208 aaKnown RBP14.09□□□□□ -0.15
LRTM1-201ENST00000273286 BLMP54132 1417 aaPredicted RBP14.09□□□□□ -0.15
LRTM1-201ENST00000273286 GLI3P10071 1580 aa14.09□□□□□ -0.15
LRTM1-201ENST00000273286 H3BM21 787 aa14.08□□□□□ -0.15
LRTM1-201ENST00000273286 TULP4Q9NRJ4 1543 aa14.08□□□□□ -0.16
LRTM1-201ENST00000273286 RAB15P59190 212 aa14.07□□□□□ -0.16
LRTM1-201ENST00000273286 DCAF11Q8TEB1 546 aa14.07□□□□□ -0.16
LRTM1-201ENST00000273286 TRAK1Q9UPV9 953 aa14.07□□□□□ -0.16
LRTM1-201ENST00000273286 ABCA3Q99758 1704 aa14.07□□□□□ -0.16
LRTM1-201ENST00000273286 IRF7Q92985 503 aa14.07□□□□□ -0.16
LRTM1-201ENST00000273286 PLCH1Q4KWH8 1693 aa14.06□□□□□ -0.16
LRTM1-201ENST00000273286 WASLO00401 505 aaPredicted RBP14.06□□□□□ -0.16
LRTM1-201ENST00000273286 SF3B2Q13435 895 aaKnown RBP14.06□□□□□ -0.16
LRTM1-201ENST00000273286 Q6ZVU0 165 aa14.06□□□□□ -0.16
LRTM1-201ENST00000273286 PMFBP1Q8TBY8 1022 aa14.06□□□□□ -0.16
LRTM1-201ENST00000273286 SRCAPQ6ZRS2 3230 aa14.05□□□□□ -0.16
LRTM1-201ENST00000273286 SEPT12Q8IYM1 358 aa14.05□□□□□ -0.16
LRTM1-201ENST00000273286 CCDC9Q9Y3X0 531 aaKnown RBP14.05□□□□□ -0.16
LRTM1-201ENST00000273286 DNMT3LQ9UJW3 386 aa14.04□□□□□ -0.16
LRTM1-201ENST00000273286 TRPM3Q9HCF6 1732 aaPredicted RBP14.03□□□□□ -0.16
LRTM1-201ENST00000273286 ALS2Q96Q42 1657 aa14.03□□□□□ -0.16
LRTM1-201ENST00000273286 INSM1Q01101 510 aaPredicted RBP14.03□□□□□ -0.16
LRTM1-201ENST00000273286 KRT27Q7Z3Y8 459 aa14.03□□□□□ -0.16
LRTM1-201ENST00000273286 HIRIP3Q9BW71 556 aaPredicted RBP14.03□□□□□ -0.16
LRTM1-201ENST00000273286 TMPRSS4Q9NRS4 437 aa14.03□□□□□ -0.16
LRTM1-201ENST00000273286 ITSN1Q15811 1721 aa14.03□□□□□ -0.16
LRTM1-201ENST00000273286 COL14A1Q05707 1796 aaKnown RBP14.02□□□□□ -0.16
LRTM1-201ENST00000273286 FAM83GA6ND36 823 aa14.02□□□□□ -0.16
LRTM1-201ENST00000273286 ZBBXA8MT70 800 aa14.02□□□□□ -0.16
LRTM1-201ENST00000273286 GMPRP36959 345 aa14.02□□□□□ -0.16
LRTM1-201ENST00000273286 NGDNQ8NEJ9 315 aaKnown RBP14.02□□□□□ -0.16
LRTM1-201ENST00000273286 ERBB4Q15303 1308 aa14.02□□□□□ -0.17
LRTM1-201ENST00000273286 TTLL8A6PVC2 850 aa14.01□□□□□ -0.17
LRTM1-201ENST00000273286 AGBL1Q96MI9 1066 aa14.01□□□□□ -0.17
LRTM1-201ENST00000273286 BRWD3Q6RI45 1802 aa14.01□□□□□ -0.17
LRTM1-201ENST00000273286 PRR36Q9H6K5 1346 aa14.01□□□□□ -0.17
LRTM1-201ENST00000273286 FBXO45P0C2W1 286 aa14□□□□□ -0.17
LRTM1-201ENST00000273286 ZNF784Q8NCA9 323 aaPredicted RBP14□□□□□ -0.17
LRTM1-201ENST00000273286 BANK1Q8NDB2 785 aa14□□□□□ -0.17
LRTM1-201ENST00000273286 BTG4Q9NY30 223 aa14□□□□□ -0.17
LRTM1-201ENST00000273286 PCDHB9Q9Y5E1 797 aa14□□□□□ -0.17
LRTM1-201ENST00000273286 ARHGEF28Q8N1W1 1705 aaKnown RBP14□□□□□ -0.17
LRTM1-201ENST00000273286 ATP7BP35670 1465 aa14□□□□□ -0.17
LRTM1-201ENST00000273286 ERVH48-1M5A8F1 160 aa13.99□□□□□ -0.17
LRTM1-201ENST00000273286 SPINT1O43278 529 aa13.99□□□□□ -0.17
LRTM1-201ENST00000273286 NRAPQ86VF7 1730 aa13.99□□□□□ -0.17
LRTM1-201ENST00000273286 KIAA1210Q9ULL0 1709 aa13.99□□□□□ -0.17
LRTM1-201ENST00000273286 ESPNB1AK53 854 aa13.98□□□□□ -0.17
LRTM1-201ENST00000273286 RELBQ01201 579 aa13.98□□□□□ -0.17
LRTM1-201ENST00000273286 MTMR14Q8NCE2 650 aa13.98□□□□□ -0.17
LRTM1-201ENST00000273286 FIGNL2A6NMB9 653 aa13.97□□□□□ -0.17
LRTM1-201ENST00000273286 BAG6P46379 1132 aa13.97□□□□□ -0.17
LRTM1-201ENST00000273286 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.97□□□□□ -0.17
LRTM1-201ENST00000273286 NUDT16Q96DE0 195 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms