RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 LRP6O75581 1613 aa28.2■■■□□ 2.11
RAB40B-201ENST00000269347 EDC3Q96F86 508 aaKnown RBP28.19■■■□□ 2.1
RAB40B-201ENST00000269347 ISCA1Q9BUE6 129 aa28.19■■■□□ 2.1
RAB40B-201ENST00000269347 EIF5BO60841 1220 aaKnown RBP28.18■■■□□ 2.1
RAB40B-201ENST00000269347 VSIG10Q8N0Z9 540 aa28.18■■■□□ 2.1
RAB40B-201ENST00000269347 LSG1Q9H089 658 aaKnown RBP28.18■■■□□ 2.1
RAB40B-201ENST00000269347 DBNLQ9UJU6 430 aaKnown RBP28.18■■■□□ 2.1
RAB40B-201ENST00000269347 NDUFB9Q9Y6M9 179 aa28.18■■■□□ 2.1
RAB40B-201ENST00000269347 HLFQ16534 295 aa28.18■■■□□ 2.1
RAB40B-201ENST00000269347 SYNE4Q8N205 404 aa28.18■■■□□ 2.1
RAB40B-201ENST00000269347 BOLA2Q9H3K6 86 aa28.18■■■□□ 2.1
RAB40B-201ENST00000269347 ZNF594Q96JF6 807 aaPredicted RBP28.17■■■□□ 2.1
RAB40B-201ENST00000269347 CYP19A1P11511 503 aaPredicted RBP28.17■■■□□ 2.1
RAB40B-201ENST00000269347 ZBTB1Q9Y2K1 713 aa28.17■■■□□ 2.1
RAB40B-201ENST00000269347 CCDC191Q8NCU4 936 aa28.16■■■□□ 2.1
RAB40B-201ENST00000269347 CHMP3Q9Y3E7 222 aa28.16■■■□□ 2.1
RAB40B-201ENST00000269347 ATG9AQ7Z3C6 839 aa28.16■■■□□ 2.1
RAB40B-201ENST00000269347 TCIRG1Q13488 830 aa28.15■■■□□ 2.1
RAB40B-201ENST00000269347 TNNI3KQ59H18 835 aa28.15■■■□□ 2.1
RAB40B-201ENST00000269347 MARCH10Q8NA82 808 aaPredicted RBP28.15■■■□□ 2.1
RAB40B-201ENST00000269347 ACSBG1Q96GR2 724 aa28.15■■■□□ 2.1
RAB40B-201ENST00000269347 FPGT-TNNI3KV9GXZ4 949 aa28.15■■■□□ 2.1
RAB40B-201ENST00000269347 CHGBP05060 677 aa28.14■■■□□ 2.1
RAB40B-201ENST00000269347 NEK4P51957 841 aa28.14■■■□□ 2.1
RAB40B-201ENST00000269347 ZGPATQ8N5A5 531 aaKnown RBP28.14■■■□□ 2.1
RAB40B-201ENST00000269347 HSPA4P34932 840 aa28.14■■■□□ 2.09
RAB40B-201ENST00000269347 PTH1RQ03431 593 aa28.14■■■□□ 2.09
RAB40B-201ENST00000269347 RASEFQ8IZ41 740 aa28.14■■■□□ 2.09
RAB40B-201ENST00000269347 TNPO1Q92973 898 aaKnown RBP28.14■■■□□ 2.09
RAB40B-201ENST00000269347 FAM227BQ96M60 508 aa28.14■■■□□ 2.09
RAB40B-201ENST00000269347 MCM4P33991 863 aa28.13■■■□□ 2.09
RAB40B-201ENST00000269347 LRRC24Q50LG9 513 aa28.13■■■□□ 2.09
RAB40B-201ENST00000269347 UPF3BQ9BZI7 483 aaKnown RBP28.13■■■□□ 2.09
RAB40B-201ENST00000269347 RAD50Q92878 1312 aa28.13■■■□□ 2.09
RAB40B-201ENST00000269347 ARXQ96QS3 562 aa28.13■■■□□ 2.09
RAB40B-201ENST00000269347 DBNDD2Q9BQY9 259 aa28.13■■■□□ 2.09
RAB40B-201ENST00000269347 HSP90AA1P07900 732 aaKnown RBP28.12■■■□□ 2.09
RAB40B-201ENST00000269347 IL17RAQ96F46 866 aa28.12■■■□□ 2.09
RAB40B-201ENST00000269347 FAM89AQ96GI7 184 aa28.12■■■□□ 2.09
RAB40B-201ENST00000269347 PUS3Q9BZE2 481 aaKnown RBP28.12■■■□□ 2.09
RAB40B-201ENST00000269347 PKP1Q13835 747 aa28.11■■■□□ 2.09
RAB40B-201ENST00000269347 RAB3GAP1Q15042 981 aa28.11■■■□□ 2.09
RAB40B-201ENST00000269347 SLIT2O94813 1529 aa28.11■■■□□ 2.09
RAB40B-201ENST00000269347 CCDC85AQ96PX6 553 aaPredicted RBP28.11■■■□□ 2.09
RAB40B-201ENST00000269347 SPATA31A5Q5VU36 1347 aa28.11■■■□□ 2.09
RAB40B-201ENST00000269347 SPATA31A7Q8IWB4 1347 aa28.11■■■□□ 2.09
RAB40B-201ENST00000269347 STARD3NLO95772 234 aa28.1■■■□□ 2.09
RAB40B-201ENST00000269347 DDB1Q16531 1140 aa28.1■■■□□ 2.09
RAB40B-201ENST00000269347 EVI5LQ96CN4 794 aa28.1■■■□□ 2.09
RAB40B-201ENST00000269347 GPATCH3Q96I76 525 aa28.1■■■□□ 2.09
RAB40B-201ENST00000269347 CCDC9Q9Y3X0 531 aaKnown RBP28.1■■■□□ 2.09
RAB40B-201ENST00000269347 SSFA2P28290 1259 aa28.1■■■□□ 2.09
RAB40B-201ENST00000269347 TEX13AQ9BXU3 409 aaPredicted RBP28.1■■■□□ 2.09
RAB40B-201ENST00000269347 NUP98P52948 1817 aa28.09■■■□□ 2.09
RAB40B-201ENST00000269347 GPTP24298 496 aa28.09■■■□□ 2.09
RAB40B-201ENST00000269347 MAP3K15Q6ZN16 1313 aa28.09■■■□□ 2.09
RAB40B-201ENST00000269347 ST18O60284 1047 aa28.09■■■□□ 2.09
RAB40B-201ENST00000269347 NOL8Q76FK4 1167 aaKnown RBP28.09■■■□□ 2.09
RAB40B-201ENST00000269347 SNX14Q9Y5W7 946 aa28.09■■■□□ 2.09
RAB40B-201ENST00000269347 NMIQ13287 307 aaPredicted RBP28.08■■■□□ 2.09
RAB40B-201ENST00000269347 COL9A3Q14050 684 aaPredicted RBP28.08■■■□□ 2.09
RAB40B-201ENST00000269347 GSE1Q14687 1217 aa28.08■■■□□ 2.09
RAB40B-201ENST00000269347 DIAPH3Q9NSV4 1193 aa28.08■■■□□ 2.09
RAB40B-201ENST00000269347 A0A0D9SFI3 127 aa28.07■■■□□ 2.08
RAB40B-201ENST00000269347 A0A0G2JS52 829 aa28.07■■■□□ 2.08
RAB40B-201ENST00000269347 ANAPC15P60006 121 aa28.07■■■□□ 2.08
RAB40B-201ENST00000269347 CIZ1Q9ULV3 898 aaPredicted RBP28.07■■■□□ 2.08
RAB40B-201ENST00000269347 GIGYF2Q6Y7W6 1299 aaKnown RBP28.06■■■□□ 2.08
RAB40B-201ENST00000269347 MYH14Q7Z406 1995 aaKnown RBP28.06■■■□□ 2.08
RAB40B-201ENST00000269347 NWD2Q9ULI1 1742 aa28.06■■■□□ 2.08
RAB40B-201ENST00000269347 ANKRD36CQ5JPF3 1778 aa28.06■■■□□ 2.08
RAB40B-201ENST00000269347 TIMM10P62072 90 aa28.06■■■□□ 2.08
RAB40B-201ENST00000269347 KIF6Q6ZMV9 814 aa28.06■■■□□ 2.08
RAB40B-201ENST00000269347 TMX3Q96JJ7 454 aa28.06■■■□□ 2.08
RAB40B-201ENST00000269347 TBC1D2BQ9UPU7 963 aa28.06■■■□□ 2.08
RAB40B-201ENST00000269347 CPA1P15085 419 aa28.05■■■□□ 2.08
RAB40B-201ENST00000269347 MCCP23508 829 aa28.05■■■□□ 2.08
RAB40B-201ENST00000269347 TRIM28Q13263 835 aaKnown RBP28.05■■■□□ 2.08
RAB40B-201ENST00000269347 KCNQ2O43526 872 aa28.04■■■□□ 2.08
RAB40B-201ENST00000269347 THRAP3Q9Y2W1 955 aaKnown RBP28.04■■■□□ 2.08
RAB40B-201ENST00000269347 TOM1O60784 492 aa28.03■■■□□ 2.08
RAB40B-201ENST00000269347 ATP5JP18859 108 aa28.03■■■□□ 2.08
RAB40B-201ENST00000269347 NLRP10Q86W26 655 aa28.03■■■□□ 2.08
RAB40B-201ENST00000269347 ZNF589Q86UQ0 364 aaPredicted RBP28.03■■■□□ 2.08
RAB40B-201ENST00000269347 PCCAP05165 728 aaPredicted RBP28.02■■■□□ 2.08
RAB40B-201ENST00000269347 SLFNL1Q499Z3 407 aa28.02■■■□□ 2.08
RAB40B-201ENST00000269347 FSD1Q9BTV5 496 aa28.02■■■□□ 2.08
RAB40B-201ENST00000269347 EYA2O00167 538 aa28.01■■■□□ 2.08
RAB40B-201ENST00000269347 ITPK1Q13572 414 aa28.01■■■□□ 2.08
RAB40B-201ENST00000269347 ADCK5Q3MIX3 580 aa28.01■■■□□ 2.08
RAB40B-201ENST00000269347 INTS5Q6P9B9 1019 aaKnown RBP28.01■■■□□ 2.08
RAB40B-201ENST00000269347 LARP6Q9BRS8 491 aaKnown RBP28.01■■■□□ 2.08
RAB40B-201ENST00000269347 EPB41L2O43491 1005 aaKnown RBP28.01■■■□□ 2.07
RAB40B-201ENST00000269347 TAF6LQ9Y6J9 622 aa28.01■■■□□ 2.07
RAB40B-201ENST00000269347 UBN2Q6ZU65 1347 aa28.01■■■□□ 2.07
RAB40B-201ENST00000269347 ZBTB38Q8NAP3 1195 aaPredicted RBP28■■■□□ 2.07
RAB40B-201ENST00000269347 CDCA7Q9BWT1 371 aaPredicted RBP28■■■□□ 2.07
RAB40B-201ENST00000269347 ZDHHC9Q9Y397 364 aa28■■■□□ 2.07
RAB40B-201ENST00000269347 CYP2E1P05181 493 aaPredicted RBP28■■■□□ 2.07
RAB40B-201ENST00000269347 PTF1AQ7RTS3 328 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms