RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 RRP15Q9Y3B9 282 aaKnown RBP20.61■□□□□ 0.89
ITGA6-201ENST00000264107 A6NNZ2 444 aa20.61■□□□□ 0.89
ITGA6-201ENST00000264107 LMOD1P29536 600 aaPredicted RBP20.61■□□□□ 0.89
ITGA6-201ENST00000264107 TUBB8Q3ZCM7 444 aa20.61■□□□□ 0.89
ITGA6-201ENST00000264107 CFAP58Q5T655 872 aa20.61■□□□□ 0.89
ITGA6-201ENST00000264107 IFNKQ9P0W0 207 aa20.61■□□□□ 0.89
ITGA6-201ENST00000264107 HDAC1Q13547 482 aaPredicted RBP20.6■□□□□ 0.89
ITGA6-201ENST00000264107 BMP2KQ9NSY1 1161 aaPredicted RBP20.6■□□□□ 0.89
ITGA6-201ENST00000264107 ALDH1L2Q3SY69 923 aa20.6■□□□□ 0.89
ITGA6-201ENST00000264107 CCDC102BQ68D86 513 aa20.6■□□□□ 0.89
ITGA6-201ENST00000264107 PRPF4BQ13523 1007 aaKnown RBP20.6■□□□□ 0.89
ITGA6-201ENST00000264107 WHAMMP3Q1A5X7 153 aa20.6■□□□□ 0.89
ITGA6-201ENST00000264107 CABP2Q9NPB3 220 aa20.6■□□□□ 0.89
ITGA6-201ENST00000264107 VEZTQ9HBM0 779 aa20.59■□□□□ 0.89
ITGA6-201ENST00000264107 CYLC1P35663 651 aaPredicted RBP20.59■□□□□ 0.89
ITGA6-201ENST00000264107 LIG3P49916 1009 aa20.59■□□□□ 0.89
ITGA6-201ENST00000264107 CEP85LQ5SZL2 805 aa20.59■□□□□ 0.89
ITGA6-201ENST00000264107 WDHD1O75717 1129 aaPredicted RBP20.59■□□□□ 0.89
ITGA6-201ENST00000264107 VAV2P52735 878 aa20.59■□□□□ 0.89
ITGA6-201ENST00000264107 CHMP4BP1P59074 171 aa20.59■□□□□ 0.89
ITGA6-201ENST00000264107 TTC39AQ5SRH9 613 aa20.59■□□□□ 0.89
ITGA6-201ENST00000264107 A0A1W2PRG0 241 aa20.59■□□□□ 0.89
ITGA6-201ENST00000264107 CCDC96Q2M329 555 aa20.59■□□□□ 0.89
ITGA6-201ENST00000264107 IFT74Q96LB3 600 aa20.59■□□□□ 0.89
ITGA6-201ENST00000264107 MXRA7P84157 204 aa20.58■□□□□ 0.89
ITGA6-201ENST00000264107 RLBP1P12271 317 aa20.58■□□□□ 0.89
ITGA6-201ENST00000264107 CCDC158Q5M9N0 1113 aa20.58■□□□□ 0.89
ITGA6-201ENST00000264107 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.58■□□□□ 0.89
ITGA6-201ENST00000264107 ERBINQ96RT1 1412 aa20.58■□□□□ 0.89
ITGA6-201ENST00000264107 CETN2P41208 172 aa20.58■□□□□ 0.88
ITGA6-201ENST00000264107 PNMA8AQ86V59 439 aaPredicted RBP20.58■□□□□ 0.88
ITGA6-201ENST00000264107 TTC14Q96N46 770 aa20.58■□□□□ 0.88
ITGA6-201ENST00000264107 VCXQ9H320 206 aa20.58■□□□□ 0.88
ITGA6-201ENST00000264107 MTIF2P46199 727 aaKnown RBP20.58■□□□□ 0.88
ITGA6-201ENST00000264107 NCOA2Q15596 1464 aa20.58■□□□□ 0.88
ITGA6-201ENST00000264107 KIF1BPQ96EK5 621 aa20.58■□□□□ 0.88
ITGA6-201ENST00000264107 ARAP1Q96P48 1450 aa20.58■□□□□ 0.88
ITGA6-201ENST00000264107 CFAP57Q96MR6 1250 aa20.57■□□□□ 0.88
ITGA6-201ENST00000264107 STMN4Q9H169 189 aaPredicted RBP20.57■□□□□ 0.88
ITGA6-201ENST00000264107 SPG7Q9UQ90 795 aa20.57■□□□□ 0.88
ITGA6-201ENST00000264107 TMPOP42166 694 aaKnown RBP20.57■□□□□ 0.88
ITGA6-201ENST00000264107 NOP2P46087 812 aaKnown RBP20.57■□□□□ 0.88
ITGA6-201ENST00000264107 CTNNBL1Q8WYA6 563 aaPredicted RBP20.57■□□□□ 0.88
ITGA6-201ENST00000264107 BAIAP2L1Q9UHR4 511 aa20.57■□□□□ 0.88
ITGA6-201ENST00000264107 AKR1B10O60218 316 aa20.56■□□□□ 0.88
ITGA6-201ENST00000264107 TACC1O75410 805 aa20.56■□□□□ 0.88
ITGA6-201ENST00000264107 CCT2P78371 535 aaKnown RBP20.56■□□□□ 0.88
ITGA6-201ENST00000264107 E2F4Q16254 413 aa20.56■□□□□ 0.88
ITGA6-201ENST00000264107 CTAGE1Q96RT6 745 aa20.56■□□□□ 0.88
ITGA6-201ENST00000264107 FAM114A2Q9NRY5 505 aa20.56■□□□□ 0.88
ITGA6-201ENST00000264107 GPRASP1Q5JY77 1395 aa20.56■□□□□ 0.88
ITGA6-201ENST00000264107 TSNAXIP1Q2TAA8 658 aa20.56■□□□□ 0.88
ITGA6-201ENST00000264107 MYO1BO43795 1136 aa20.56■□□□□ 0.88
ITGA6-201ENST00000264107 CYB5RLQ6IPT4 315 aa20.56■□□□□ 0.88
ITGA6-201ENST00000264107 IFT81Q8WYA0 676 aa20.56■□□□□ 0.88
ITGA6-201ENST00000264107 FAM184BQ9ULE4 1060 aa20.56■□□□□ 0.88
ITGA6-201ENST00000264107 HDGFL1Q5TGJ6 251 aa20.55■□□□□ 0.88
ITGA6-201ENST00000264107 CACNA2D3Q8IZS8 1091 aa20.55■□□□□ 0.88
ITGA6-201ENST00000264107 U3KPZ7 1027 aaPredicted RBP20.55■□□□□ 0.88
ITGA6-201ENST00000264107 GBP1P32455 592 aa20.55■□□□□ 0.88
ITGA6-201ENST00000264107 SYKP43405 635 aa20.55■□□□□ 0.88
ITGA6-201ENST00000264107 NECAB1Q8N987 351 aa20.55■□□□□ 0.88
ITGA6-201ENST00000264107 MRPS27Q92552 414 aaKnown RBP20.55■□□□□ 0.88
ITGA6-201ENST00000264107 FRMD3A2A2Y4 597 aa20.55■□□□□ 0.88
ITGA6-201ENST00000264107 POLR3DP05423 398 aaPredicted RBP20.55■□□□□ 0.88
ITGA6-201ENST00000264107 HMGB1P09429 215 aaKnown RBP20.55■□□□□ 0.88
ITGA6-201ENST00000264107 MAP3K9P80192 1104 aa20.55■□□□□ 0.88
ITGA6-201ENST00000264107 LARP1Q6PKG0 1096 aaKnown RBP20.55■□□□□ 0.88
ITGA6-201ENST00000264107 OSCARQ8IYS5 282 aa20.55■□□□□ 0.88
ITGA6-201ENST00000264107 GUCA1BQ9UMX6 200 aa20.55■□□□□ 0.88
ITGA6-201ENST00000264107 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.55■□□□□ 0.88
ITGA6-201ENST00000264107 ERICH3Q5RHP9 1530 aa20.55■□□□□ 0.88
ITGA6-201ENST00000264107 SETDB1Q15047 1291 aa20.55■□□□□ 0.88
ITGA6-201ENST00000264107 ANKRD50Q9ULJ7 1429 aa20.55■□□□□ 0.88
ITGA6-201ENST00000264107 FYCO1Q9BQS8 1478 aa20.55■□□□□ 0.88
ITGA6-201ENST00000264107 ANKRD30BQ9BXX2 1392 aa20.55■□□□□ 0.88
ITGA6-201ENST00000264107 HPDP32754 393 aaPredicted RBP20.55■□□□□ 0.88
ITGA6-201ENST00000264107 ZNF75DP51815 510 aa20.55■□□□□ 0.88
ITGA6-201ENST00000264107 KIAA0753Q2KHM9 967 aa20.55■□□□□ 0.88
ITGA6-201ENST00000264107 NCOA1Q15788 1441 aa20.54■□□□□ 0.88
ITGA6-201ENST00000264107 CFTRP13569 1480 aa20.54■□□□□ 0.88
ITGA6-201ENST00000264107 CABS1Q96KC9 395 aa20.54■□□□□ 0.88
ITGA6-201ENST00000264107 FGFR1OPO95684 399 aaKnown RBP20.54■□□□□ 0.88
ITGA6-201ENST00000264107 SDSP20132 328 aa20.54■□□□□ 0.88
ITGA6-201ENST00000264107 CCDC38Q502W7 563 aa20.54■□□□□ 0.88
ITGA6-201ENST00000264107 HOOK3Q86VS8 718 aa20.54■□□□□ 0.88
ITGA6-201ENST00000264107 TSG101Q99816 390 aa20.54■□□□□ 0.88
ITGA6-201ENST00000264107 KRT86O43790 486 aa20.54■□□□□ 0.88
ITGA6-201ENST00000264107 TCHPQ9BT92 498 aa20.54■□□□□ 0.88
ITGA6-201ENST00000264107 SYNJ1O43426 1573 aa20.53■□□□□ 0.88
ITGA6-201ENST00000264107 ICE2Q659A1 982 aa20.53■□□□□ 0.88
ITGA6-201ENST00000264107 SEPT14Q6ZU15 432 aa20.53■□□□□ 0.88
ITGA6-201ENST00000264107 ZNF215Q9UL58 517 aaPredicted RBP20.53■□□□□ 0.88
ITGA6-201ENST00000264107 ERCC6LQ2NKX8 1250 aa20.53■□□□□ 0.88
ITGA6-201ENST00000264107 TRIM7Q9C029 511 aa20.53■□□□□ 0.88
ITGA6-201ENST00000264107 TRIM21P19474 475 aaKnown RBP20.53■□□□□ 0.88
ITGA6-201ENST00000264107 KANK3Q6NY19 840 aa20.52■□□□□ 0.88
ITGA6-201ENST00000264107 BAG1Q99933 345 aaPredicted RBP20.52■□□□□ 0.88
ITGA6-201ENST00000264107 NACAP1Q9BZK3 213 aa20.52■□□□□ 0.88
ITGA6-201ENST00000264107 ANAPC15P60006 121 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms