RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 E2F4Q16254 413 aa16.67■□□□□ 0.26
SCARF1-201ENST00000263071 UVSSAQ2YD98 709 aa16.67■□□□□ 0.26
SCARF1-201ENST00000263071 ADCK5Q3MIX3 580 aa16.67■□□□□ 0.26
SCARF1-201ENST00000263071 LRRC2Q9BYS8 371 aa16.67■□□□□ 0.26
SCARF1-201ENST00000263071 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.67■□□□□ 0.26
SCARF1-201ENST00000263071 BMS1Q14692 1282 aaKnown RBP16.66■□□□□ 0.26
SCARF1-201ENST00000263071 CWF19L2Q2TBE0 894 aaKnown RBP16.66■□□□□ 0.26
SCARF1-201ENST00000263071 KMT5BQ4FZB7 885 aa16.66■□□□□ 0.26
SCARF1-201ENST00000263071 CNTROBQ8N137 903 aa16.66■□□□□ 0.26
SCARF1-201ENST00000263071 SOS1Q07889 1333 aaPredicted RBP16.66■□□□□ 0.26
SCARF1-201ENST00000263071 AACSQ86V21 672 aa16.66■□□□□ 0.26
SCARF1-201ENST00000263071 LGR6Q9HBX8 967 aa16.66■□□□□ 0.26
SCARF1-201ENST00000263071 PDRG1Q9NUG6 133 aa16.66■□□□□ 0.26
SCARF1-201ENST00000263071 SIGLEC1Q9BZZ2 1709 aa16.66■□□□□ 0.26
SCARF1-201ENST00000263071 A0A087WWV3 80 aa16.66■□□□□ 0.26
SCARF1-201ENST00000263071 DNAJC21Q5F1R6 531 aaKnown RBP16.66■□□□□ 0.26
SCARF1-201ENST00000263071 CXorf56Q9H5V9 222 aa16.66■□□□□ 0.26
SCARF1-201ENST00000263071 SNX14Q9Y5W7 946 aa16.66■□□□□ 0.26
SCARF1-201ENST00000263071 LARP1BQ659C4 914 aaKnown RBP16.65■□□□□ 0.26
SCARF1-201ENST00000263071 EDC3Q96F86 508 aaKnown RBP16.65■□□□□ 0.26
SCARF1-201ENST00000263071 ADGRB2O60241 1585 aa16.65■□□□□ 0.26
SCARF1-201ENST00000263071 MCM2P49736 904 aa16.65■□□□□ 0.26
SCARF1-201ENST00000263071 PTH1RQ03431 593 aa16.65■□□□□ 0.26
SCARF1-201ENST00000263071 BICD2Q8TD16 824 aa16.65■□□□□ 0.26
SCARF1-201ENST00000263071 FAM212AQ96EL1 285 aa16.65■□□□□ 0.26
SCARF1-201ENST00000263071 DONSONQ9NYP3 566 aa16.65■□□□□ 0.26
SCARF1-201ENST00000263071 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.65■□□□□ 0.26
SCARF1-201ENST00000263071 CFAP74Q9C0B2 1584 aa16.65■□□□□ 0.26
SCARF1-201ENST00000263071 SETBP1Q9Y6X0 1596 aa16.65■□□□□ 0.26
SCARF1-201ENST00000263071 MED14O60244 1454 aa16.65■□□□□ 0.26
SCARF1-201ENST00000263071 PIK3R4Q99570 1358 aa16.65■□□□□ 0.26
SCARF1-201ENST00000263071 MNS1Q8NEH6 495 aa16.64■□□□□ 0.25
SCARF1-201ENST00000263071 IL17REQ8NFR9 667 aa16.64■□□□□ 0.25
SCARF1-201ENST00000263071 MYL6BP14649 208 aa16.64■□□□□ 0.25
SCARF1-201ENST00000263071 CLASRPQ8N2M8 674 aaKnown RBP16.64■□□□□ 0.25
SCARF1-201ENST00000263071 LRRC59Q96AG4 307 aaKnown RBP16.64■□□□□ 0.25
SCARF1-201ENST00000263071 SUFUQ9UMX1 484 aa16.64■□□□□ 0.25
SCARF1-201ENST00000263071 ZSCAN22P10073 491 aaPredicted RBP16.64■□□□□ 0.25
SCARF1-201ENST00000263071 ZSCAN26Q16670 478 aa16.64■□□□□ 0.25
SCARF1-201ENST00000263071 PAXBP1Q9Y5B6 917 aa16.64■□□□□ 0.25
SCARF1-201ENST00000263071 NEXMIFQ5QGS0 1516 aa16.64■□□□□ 0.25
SCARF1-201ENST00000263071 PPLO60437 1756 aa16.64■□□□□ 0.25
SCARF1-201ENST00000263071 IFT172Q9UG01 1749 aa16.63■□□□□ 0.25
SCARF1-201ENST00000263071 COL9A3Q14050 684 aaPredicted RBP16.63■□□□□ 0.25
SCARF1-201ENST00000263071 RUFY3Q7L099 469 aa16.63■□□□□ 0.25
SCARF1-201ENST00000263071 LUZP1Q86V48 1076 aa16.63■□□□□ 0.25
SCARF1-201ENST00000263071 TICAM2Q86XR7 235 aa16.63■□□□□ 0.25
SCARF1-201ENST00000263071 FAM227BQ96M60 508 aa16.63■□□□□ 0.25
SCARF1-201ENST00000263071 LIMCH1Q9UPQ0 1083 aa16.63■□□□□ 0.25
SCARF1-201ENST00000263071 TPM4P67936 248 aa16.63■□□□□ 0.25
SCARF1-201ENST00000263071 CCDC183Q5T5S1 534 aa16.63■□□□□ 0.25
SCARF1-201ENST00000263071 RNF217Q8TC41 542 aa16.63■□□□□ 0.25
SCARF1-201ENST00000263071 ZNF526Q8TF50 670 aaPredicted RBP16.63■□□□□ 0.25
SCARF1-201ENST00000263071 FSD1Q9BTV5 496 aa16.63■□□□□ 0.25
SCARF1-201ENST00000263071 EDC4Q6P2E9 1401 aaKnown RBP16.62■□□□□ 0.25
SCARF1-201ENST00000263071 PRAMEF22A3QJZ6 481 aa16.62■□□□□ 0.25
SCARF1-201ENST00000263071 MAP2K1Q02750 393 aaPredicted RBP16.62■□□□□ 0.25
SCARF1-201ENST00000263071 TPD52L1Q16890 204 aaPredicted RBP16.62■□□□□ 0.25
SCARF1-201ENST00000263071 MLH3Q9UHC1 1453 aa16.62■□□□□ 0.25
SCARF1-201ENST00000263071 RAB11FIP3O75154 756 aa16.62■□□□□ 0.25
SCARF1-201ENST00000263071 ERCC4Q92889 916 aaPredicted RBP16.62■□□□□ 0.25
SCARF1-201ENST00000263071 TRIM5Q9C035 493 aa16.62■□□□□ 0.25
SCARF1-201ENST00000263071 LCMT1Q9UIC8 334 aa16.62■□□□□ 0.25
SCARF1-201ENST00000263071 ZNF330Q9Y3S2 320 aaPredicted RBP16.62■□□□□ 0.25
SCARF1-201ENST00000263071 CPS1P31327 1500 aa16.62■□□□□ 0.25
SCARF1-201ENST00000263071 ZC3H13Q5T200 1668 aaKnown RBP16.62■□□□□ 0.25
SCARF1-201ENST00000263071 AMOTL2Q9Y2J4 779 aa16.61■□□□□ 0.25
SCARF1-201ENST00000263071 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.61■□□□□ 0.25
SCARF1-201ENST00000263071 ZKSCAN1P17029 563 aaPredicted RBP16.61■□□□□ 0.25
SCARF1-201ENST00000263071 HDGFP51858 240 aaKnown RBP16.61■□□□□ 0.25
SCARF1-201ENST00000263071 LRMPQ12912 555 aa16.61■□□□□ 0.25
SCARF1-201ENST00000263071 MUM1L1Q5H9M0 696 aa16.61■□□□□ 0.25
SCARF1-201ENST00000263071 FBXO38Q6PIJ6 1188 aa16.61■□□□□ 0.25
SCARF1-201ENST00000263071 CYP46A1Q9Y6A2 500 aa16.61■□□□□ 0.25
SCARF1-201ENST00000263071 CHGBP05060 677 aa16.6■□□□□ 0.25
SCARF1-201ENST00000263071 PTGS1P23219 599 aa16.6■□□□□ 0.25
SCARF1-201ENST00000263071 RBM6P78332 1123 aaKnown RBP16.6■□□□□ 0.25
SCARF1-201ENST00000263071 GUCY1B3Q02153 619 aa16.6■□□□□ 0.25
SCARF1-201ENST00000263071 ZNF446Q9NWS9 450 aa16.6■□□□□ 0.25
SCARF1-201ENST00000263071 HECW2Q9P2P5 1572 aa16.6■□□□□ 0.25
SCARF1-201ENST00000263071 F13A1P00488 732 aa16.6■□□□□ 0.25
SCARF1-201ENST00000263071 KIF1CO43896 1103 aaKnown RBP16.6■□□□□ 0.25
SCARF1-201ENST00000263071 NBPF20Q3BBV1 942 aa16.6■□□□□ 0.25
SCARF1-201ENST00000263071 LRCH2Q5VUJ6 765 aa16.6■□□□□ 0.25
SCARF1-201ENST00000263071 RRP15Q9Y3B9 282 aaKnown RBP16.6■□□□□ 0.25
SCARF1-201ENST00000263071 ARHGEF40Q8TER5 1519 aa16.6■□□□□ 0.25
SCARF1-201ENST00000263071 LMTK2Q8IWU2 1503 aa16.59■□□□□ 0.25
SCARF1-201ENST00000263071 ELF2Q15723 593 aa16.59■□□□□ 0.25
SCARF1-201ENST00000263071 KIF1BPQ96EK5 621 aa16.59■□□□□ 0.25
SCARF1-201ENST00000263071 MYO3AQ8NEV4 1616 aa16.59■□□□□ 0.25
SCARF1-201ENST00000263071 ATP2B1P20020 1258 aa16.59■□□□□ 0.25
SCARF1-201ENST00000263071 CALRP27797 417 aaKnown RBP16.59■□□□□ 0.25
SCARF1-201ENST00000263071 ARHGEF28Q8N1W1 1705 aaKnown RBP16.59■□□□□ 0.25
SCARF1-201ENST00000263071 IRF6O14896 467 aa16.58■□□□□ 0.25
SCARF1-201ENST00000263071 ATP6V1AP38606 617 aa16.58■□□□□ 0.25
SCARF1-201ENST00000263071 LTKP29376 864 aa16.58■□□□□ 0.24
SCARF1-201ENST00000263071 HSPA4P34932 840 aa16.58■□□□□ 0.24
SCARF1-201ENST00000263071 ANKRD20A12PQ8NF67 263 aa16.58■□□□□ 0.24
SCARF1-201ENST00000263071 DNAAF4Q8WXU2 420 aa16.58■□□□□ 0.24
SCARF1-201ENST00000263071 SYTL4Q96C24 671 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms