RNA–Protein interactions for RNA: ENST00000262805.16

PDE4C-201, Transcript of phosphodiesterase 4C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4C, Length 2,472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-201ENST00000262805 A0A0D9SFI3 127 aa20.05■□□□□ 0.8
PDE4C-201ENST00000262805 DNM1Q05193 864 aaKnown RBP20.05■□□□□ 0.8
PDE4C-201ENST00000262805 EPHA10Q5JZY3 1008 aa20.05■□□□□ 0.8
PDE4C-201ENST00000262805 CREB3L3Q68CJ9 461 aa20.05■□□□□ 0.8
PDE4C-201ENST00000262805 JARID2Q92833 1246 aaPredicted RBP20.05■□□□□ 0.8
PDE4C-201ENST00000262805 PIP4K2AP48426 406 aaPredicted RBP20.05■□□□□ 0.8
PDE4C-201ENST00000262805 ZC3H6P61129 1189 aaKnown RBP20.05■□□□□ 0.8
PDE4C-201ENST00000262805 G3BP1Q13283 466 aaKnown RBP eCLIP20.05■□□□□ 0.8
PDE4C-201ENST00000262805 TCEANC2Q96MN5 208 aa20.05■□□□□ 0.8
PDE4C-201ENST00000262805 STRCQ7RTU9 1775 aa20.05■□□□□ 0.8
PDE4C-201ENST00000262805 CCDC183Q5T5S1 534 aa20.04■□□□□ 0.8
PDE4C-201ENST00000262805 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.04■□□□□ 0.8
PDE4C-201ENST00000262805 TPCN1Q9ULQ1 816 aa20.04■□□□□ 0.8
PDE4C-201ENST00000262805 PHF14O94880 888 aa20.04■□□□□ 0.8
PDE4C-201ENST00000262805 RIC3Q7Z5B4 369 aa20.04■□□□□ 0.8
PDE4C-201ENST00000262805 EDC3Q96F86 508 aaKnown RBP20.04■□□□□ 0.8
PDE4C-201ENST00000262805 TM6SF1Q9BZW5 370 aa20.04■□□□□ 0.8
PDE4C-201ENST00000262805 CCDC39Q9UFE4 941 aa20.04■□□□□ 0.8
PDE4C-201ENST00000262805 ADAMTS7Q9UKP4 1686 aa20.04■□□□□ 0.8
PDE4C-201ENST00000262805 TRPM3Q9HCF6 1732 aaPredicted RBP20.04■□□□□ 0.8
PDE4C-201ENST00000262805 UBE2HP62256 183 aa20.03■□□□□ 0.8
PDE4C-201ENST00000262805 ZNF790Q6PG37 636 aa20.03■□□□□ 0.8
PDE4C-201ENST00000262805 MAP4K1Q92918 833 aa20.03■□□□□ 0.8
PDE4C-201ENST00000262805 R3HCC1Q9Y3T6 440 aaKnown RBP20.03■□□□□ 0.8
PDE4C-201ENST00000262805 TPM2P07951 284 aa20.03■□□□□ 0.8
PDE4C-201ENST00000262805 ERBB3P21860 1342 aa20.03■□□□□ 0.8
PDE4C-201ENST00000262805 SLC27A2O14975 620 aa20.02■□□□□ 0.8
PDE4C-201ENST00000262805 DDX58O95786 925 aaKnown RBP20.02■□□□□ 0.8
PDE4C-201ENST00000262805 HCLS1P14317 486 aaPredicted RBP20.02■□□□□ 0.8
PDE4C-201ENST00000262805 KCNJ4P48050 445 aa20.02■□□□□ 0.8
PDE4C-201ENST00000262805 KDM6AO15550 1401 aaPredicted RBP20.02■□□□□ 0.8
PDE4C-201ENST00000262805 VPS37CA5D8V6 355 aaPredicted RBP20.02■□□□□ 0.8
PDE4C-201ENST00000262805 NEURL1BA8MQ27 555 aa20.02■□□□□ 0.8
PDE4C-201ENST00000262805 KRT28Q7Z3Y7 464 aa20.02■□□□□ 0.8
PDE4C-201ENST00000262805 ZNF589Q86UQ0 364 aaPredicted RBP20.02■□□□□ 0.8
PDE4C-201ENST00000262805 XAGE3Q8WTP9 111 aa20.02■□□□□ 0.8
PDE4C-201ENST00000262805 USP25Q9UHP3 1055 aa20.02■□□□□ 0.8
PDE4C-201ENST00000262805 HSP90AA2PQ14568 343 aaPredicted RBP20.01■□□□□ 0.79
PDE4C-201ENST00000262805 NFATC2IPQ8NCF5 419 aa20.01■□□□□ 0.79
PDE4C-201ENST00000262805 FSD1Q9BTV5 496 aa20.01■□□□□ 0.79
PDE4C-201ENST00000262805 ZKSCAN1P17029 563 aaPredicted RBP20.01■□□□□ 0.79
PDE4C-201ENST00000262805 AEBP2Q6ZN18 517 aaPredicted RBP20.01■□□□□ 0.79
PDE4C-201ENST00000262805 COPS6Q7L5N1 327 aa20.01■□□□□ 0.79
PDE4C-201ENST00000262805 MYD88Q99836 296 aa20.01■□□□□ 0.79
PDE4C-201ENST00000262805 CHGBP05060 677 aa20■□□□□ 0.79
PDE4C-201ENST00000262805 ZSCAN31Q96LW9 406 aaPredicted RBP20■□□□□ 0.79
PDE4C-201ENST00000262805 SH2B1Q9NRF2 756 aaPredicted RBP20■□□□□ 0.79
PDE4C-201ENST00000262805 HDAC5Q9UQL6 1122 aa20■□□□□ 0.79
PDE4C-201ENST00000262805 NDUFB9Q9Y6M9 179 aa20■□□□□ 0.79
PDE4C-201ENST00000262805 GCKRQ14397 625 aa20■□□□□ 0.79
PDE4C-201ENST00000262805 GIMAP6Q6P9H5 292 aa20■□□□□ 0.79
PDE4C-201ENST00000262805 SLC52A2Q9HAB3 445 aa20■□□□□ 0.79
PDE4C-201ENST00000262805 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20■□□□□ 0.79
PDE4C-201ENST00000262805 PTMAP06454 111 aaKnown RBP19.99■□□□□ 0.79
PDE4C-201ENST00000262805 FAM173BQ6P4H8 233 aa19.99■□□□□ 0.79
PDE4C-201ENST00000262805 UBE2Q2Q8WVN8 375 aa19.99■□□□□ 0.79
PDE4C-201ENST00000262805 ZNF496Q96IT1 587 aaPredicted RBP19.99■□□□□ 0.79
PDE4C-201ENST00000262805 SCN11AQ9UI33 1791 aa19.99■□□□□ 0.79
PDE4C-201ENST00000262805 LARP1Q6PKG0 1096 aaKnown RBP19.99■□□□□ 0.79
PDE4C-201ENST00000262805 MED23Q9ULK4 1368 aa19.99■□□□□ 0.79
PDE4C-201ENST00000262805 FERMT3Q86UX7 667 aa19.98■□□□□ 0.79
PDE4C-201ENST00000262805 DDX17Q92841 729 aaKnown RBP19.98■□□□□ 0.79
PDE4C-201ENST00000262805 ZNF830Q96NB3 372 aaPredicted RBP19.98■□□□□ 0.79
PDE4C-201ENST00000262805 SNRKQ9NRH2 765 aa19.98■□□□□ 0.79
PDE4C-201ENST00000262805 NLRP2Q9NX02 1062 aa19.98■□□□□ 0.79
PDE4C-201ENST00000262805 USP16Q9Y5T5 823 aa19.98■□□□□ 0.79
PDE4C-201ENST00000262805 NPHP3Q7Z494 1330 aa19.98■□□□□ 0.79
PDE4C-201ENST00000262805 CDC37L1Q7L3B6 337 aa19.98■□□□□ 0.79
PDE4C-201ENST00000262805 ATP6V1DQ9Y5K8 247 aa19.98■□□□□ 0.79
PDE4C-201ENST00000262805 RRP9O43818 475 aaKnown RBP19.97■□□□□ 0.79
PDE4C-201ENST00000262805 MCM5P33992 734 aa19.97■□□□□ 0.79
PDE4C-201ENST00000262805 COL15A1P39059 1388 aa19.97■□□□□ 0.79
PDE4C-201ENST00000262805 LRP10Q7Z4F1 713 aa19.97■□□□□ 0.79
PDE4C-201ENST00000262805 FUCA2Q9BTY2 467 aa19.97■□□□□ 0.79
PDE4C-201ENST00000262805 METTL22Q9BUU2 404 aaPredicted RBP19.97■□□□□ 0.79
PDE4C-201ENST00000262805 MEGF6O75095 1541 aa19.96■□□□□ 0.79
PDE4C-201ENST00000262805 HIP1O00291 1037 aa19.96■□□□□ 0.79
PDE4C-201ENST00000262805 PHKG2P15735 406 aa19.96■□□□□ 0.79
PDE4C-201ENST00000262805 TOB2Q14106 344 aaPredicted RBP19.96■□□□□ 0.79
PDE4C-201ENST00000262805 FAM184AQ8NB25 1140 aa19.96■□□□□ 0.79
PDE4C-201ENST00000262805 RAPGEF4Q8WZA2 1011 aa19.96■□□□□ 0.79
PDE4C-201ENST00000262805 DBNLQ9UJU6 430 aaKnown RBP19.96■□□□□ 0.79
PDE4C-201ENST00000262805 MRC1P22897 1456 aa19.96■□□□□ 0.79
PDE4C-201ENST00000262805 ADCY5O95622 1261 aa19.96■□□□□ 0.79
PDE4C-201ENST00000262805 NEXNQ0ZGT2 675 aa19.96■□□□□ 0.79
PDE4C-201ENST00000262805 LARP1BQ659C4 914 aaKnown RBP19.96■□□□□ 0.79
PDE4C-201ENST00000262805 RFX5P48382 616 aaPredicted RBP19.95■□□□□ 0.78
PDE4C-201ENST00000262805 STK3Q13188 491 aa19.95■□□□□ 0.78
PDE4C-201ENST00000262805 BLOC1S2Q6QNY1 142 aa19.95■□□□□ 0.78
PDE4C-201ENST00000262805 TTC6Q86TZ1 520 aa19.95■□□□□ 0.78
PDE4C-201ENST00000262805 RPS6KB1P23443 525 aa19.94■□□□□ 0.78
PDE4C-201ENST00000262805 TFCP2Q12800 502 aa19.94■□□□□ 0.78
PDE4C-201ENST00000262805 UVSSAQ2YD98 709 aa19.94■□□□□ 0.78
PDE4C-201ENST00000262805 AP5Z1O43299 807 aa19.94■□□□□ 0.78
PDE4C-201ENST00000262805 PSMA5P28066 241 aa19.94■□□□□ 0.78
PDE4C-201ENST00000262805 PTPN12Q05209 780 aaKnown RBP19.94■□□□□ 0.78
PDE4C-201ENST00000262805 ANKRD13DQ6ZTN6 518 aa19.94■□□□□ 0.78
PDE4C-201ENST00000262805 CHMP3Q9Y3E7 222 aa19.94■□□□□ 0.78
PDE4C-201ENST00000262805 C1orf167Q5SNV9 1468 aa19.93■□□□□ 0.78
PDE4C-201ENST00000262805 ATP5J2-PTCD1G3V325 749 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms