RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 ZSCAN31Q96LW9 406 aaPredicted RBP21.39■■□□□ 1.01
TRAF4-201ENST00000262395 ADCY9O60503 1353 aa21.38■■□□□ 1.01
TRAF4-201ENST00000262395 KRT85P78386 507 aa21.38■■□□□ 1.01
TRAF4-201ENST00000262395 TYRO3Q06418 890 aa21.38■■□□□ 1.01
TRAF4-201ENST00000262395 NBPF6Q5VWK0 638 aa21.38■■□□□ 1.01
TRAF4-201ENST00000262395 KLHDC4Q8TBB5 520 aa21.38■■□□□ 1.01
TRAF4-201ENST00000262395 NBPF4Q96M43 638 aa21.38■■□□□ 1.01
TRAF4-201ENST00000262395 SH2B1Q9NRF2 756 aaPredicted RBP21.38■■□□□ 1.01
TRAF4-201ENST00000262395 MRVI1Q9Y6F6 885 aa21.38■■□□□ 1.01
TRAF4-201ENST00000262395 PXDNLA1KZ92 1463 aa21.38■■□□□ 1.01
TRAF4-201ENST00000262395 TEFQ10587 303 aa21.38■■□□□ 1.01
TRAF4-201ENST00000262395 AIMP1Q12904 312 aaKnown RBP21.38■■□□□ 1.01
TRAF4-201ENST00000262395 MAP3K11Q16584 847 aa21.38■■□□□ 1.01
TRAF4-201ENST00000262395 GOLGA6L4A6NEF3 574 aa21.37■■□□□ 1.01
TRAF4-201ENST00000262395 BTBD11A6QL63 1104 aa21.37■■□□□ 1.01
TRAF4-201ENST00000262395 LRRC59Q96AG4 307 aaKnown RBP21.37■■□□□ 1.01
TRAF4-201ENST00000262395 EDC3Q96F86 508 aaKnown RBP21.37■■□□□ 1.01
TRAF4-201ENST00000262395 A0A0D9SFI3 127 aa21.37■■□□□ 1.01
TRAF4-201ENST00000262395 ANO6Q4KMQ2 910 aa21.37■■□□□ 1.01
TRAF4-201ENST00000262395 LARP1Q6PKG0 1096 aaKnown RBP21.37■■□□□ 1.01
TRAF4-201ENST00000262395 SMAP1Q8IYB5 467 aaPredicted RBP21.37■■□□□ 1.01
TRAF4-201ENST00000262395 SLC27A2O14975 620 aa21.36■■□□□ 1.01
TRAF4-201ENST00000262395 CCDC186Q7Z3E2 898 aa21.36■■□□□ 1.01
TRAF4-201ENST00000262395 GTF2F1P35269 517 aaKnown RBP eCLIP21.36■■□□□ 1.011e-10■■■■□ 26.4
TRAF4-201ENST00000262395 EAF2Q96CJ1 260 aaPredicted RBP21.36■■□□□ 1.01
TRAF4-201ENST00000262395 DDX11Q96FC9 970 aa21.36■■□□□ 1.01
TRAF4-201ENST00000262395 TNMDQ9H2S6 317 aa21.36■■□□□ 1.01
TRAF4-201ENST00000262395 FAM200AQ8TCP9 573 aa21.35■■□□□ 1.01
TRAF4-201ENST00000262395 GPATCH3Q96I76 525 aa21.35■■□□□ 1.01
TRAF4-201ENST00000262395 LRRC37A3O60309 1634 aa21.35■■□□□ 1.01
TRAF4-201ENST00000262395 FOSBP53539 338 aa21.35■■□□□ 1.01
TRAF4-201ENST00000262395 EVI5LQ96CN4 794 aa21.35■■□□□ 1.01
TRAF4-201ENST00000262395 NDUFB9Q9Y6M9 179 aa21.35■■□□□ 1.01
TRAF4-201ENST00000262395 CHAF1AQ13111 956 aaPredicted RBP21.35■■□□□ 1.01
TRAF4-201ENST00000262395 SPATA32Q96LK8 384 aa21.35■■□□□ 1.01
TRAF4-201ENST00000262395 FSD1Q9BTV5 496 aa21.35■■□□□ 1.01
TRAF4-201ENST00000262395 CBX8Q9HC52 389 aa21.35■■□□□ 1.01
TRAF4-201ENST00000262395 PIK3C2AO00443 1686 aa21.34■■□□□ 1.01
TRAF4-201ENST00000262395 CEBPZQ03701 1054 aaKnown RBP21.34■■□□□ 1.01
TRAF4-201ENST00000262395 C16orf45Q96MC5 204 aaPredicted RBP21.34■■□□□ 1.01
TRAF4-201ENST00000262395 NWD1Q149M9 1564 aa21.34■■□□□ 1.01
TRAF4-201ENST00000262395 USP42Q9H9J4 1324 aaKnown RBP21.34■■□□□ 1.01
TRAF4-201ENST00000262395 SASH1O94885 1247 aa21.34■■□□□ 1.01
TRAF4-201ENST00000262395 TM6SF1Q9BZW5 370 aa21.34■■□□□ 1.01
TRAF4-201ENST00000262395 TRIM5Q9C035 493 aa21.34■■□□□ 1.01
TRAF4-201ENST00000262395 EID1Q9Y6B2 187 aa21.34■■□□□ 1.01
TRAF4-201ENST00000262395 GOLGA6L6A8MZA4 724 aa21.33■■□□□ 1.01
TRAF4-201ENST00000262395 CHGBP05060 677 aa21.33■■□□□ 1.01
TRAF4-201ENST00000262395 ZNF530Q6P9A1 599 aaPredicted RBP21.33■■□□□ 1.01
TRAF4-201ENST00000262395 BLOC1S2Q6QNY1 142 aa21.33■■□□□ 1.01
TRAF4-201ENST00000262395 DIP2BQ9P265 1576 aa21.33■■□□□ 1.01
TRAF4-201ENST00000262395 CACNA1FO60840 1977 aa21.33■■□□□ 1.01
TRAF4-201ENST00000262395 ZNF589Q86UQ0 364 aaPredicted RBP21.33■■□□□ 1
TRAF4-201ENST00000262395 PDCL2Q8N4E4 241 aa21.33■■□□□ 1
TRAF4-201ENST00000262395 MAP4K1Q92918 833 aa21.33■■□□□ 1
TRAF4-201ENST00000262395 JAK2O60674 1132 aa21.32■■□□□ 1
TRAF4-201ENST00000262395 PPFIA3O75145 1194 aa21.32■■□□□ 1
TRAF4-201ENST00000262395 U2AF2P26368 475 aaKnown RBP eCLIP21.32■■□□□ 11e-6■□□□□ 8.6
TRAF4-201ENST00000262395 SUCLG2Q96I99 432 aa21.32■■□□□ 1
TRAF4-201ENST00000262395 NR1I2O75469 434 aa21.32■■□□□ 1
TRAF4-201ENST00000262395 BICC1Q9H694 974 aaKnown RBP21.32■■□□□ 1
TRAF4-201ENST00000262395 BABAM1Q9NWV8 329 aa21.32■■□□□ 1
TRAF4-201ENST00000262395 PLEKHG1Q9ULL1 1385 aa21.32■■□□□ 1
TRAF4-201ENST00000262395 IGSF3O75054 1194 aa21.32■■□□□ 1
TRAF4-201ENST00000262395 BICD2Q8TD16 824 aa21.32■■□□□ 1
TRAF4-201ENST00000262395 DNAJC25Q9H1X3 360 aa21.32■■□□□ 1
TRAF4-201ENST00000262395 CCDC9Q9Y3X0 531 aaKnown RBP21.32■■□□□ 1
TRAF4-201ENST00000262395 G3BP1Q13283 466 aaKnown RBP eCLIP21.31■■□□□ 1
TRAF4-201ENST00000262395 A0A087WWV3 80 aa21.3■■□□□ 1
TRAF4-201ENST00000262395 ZSCAN20P17040 1043 aaPredicted RBP21.3■■□□□ 1
TRAF4-201ENST00000262395 TOB2Q14106 344 aaPredicted RBP21.3■■□□□ 1
TRAF4-201ENST00000262395 NAA30Q147X3 362 aaPredicted RBP21.3■■□□□ 1
TRAF4-201ENST00000262395 DBF4Q9UBU7 674 aaPredicted RBP21.3■■□□□ 1
TRAF4-201ENST00000262395 UBR1Q8IWV7 1749 aa21.3■■□□□ 1
TRAF4-201ENST00000262395 LEO1Q8WVC0 666 aaPredicted RBP21.3■■□□□ 1
TRAF4-201ENST00000262395 LRRC2Q9BYS8 371 aa21.3■■□□□ 1
TRAF4-201ENST00000262395 KCNB2Q92953 911 aa21.29■■□□□ 1
TRAF4-201ENST00000262395 KAZALD1Q96I82 304 aa21.29■■□□□ 1
TRAF4-201ENST00000262395 CEMIPQ8WUJ3 1361 aa21.29■■□□□ 1
TRAF4-201ENST00000262395 PSMA5P28066 241 aa21.29■■□□□ 1
TRAF4-201ENST00000262395 RPS6KB1P23443 525 aa21.28■■□□□ 1
TRAF4-201ENST00000262395 PGBD1Q96JS3 809 aa21.28■■□□□ 1
TRAF4-201ENST00000262395 MTX1Q13505 466 aa21.28■■□□□ 1
TRAF4-201ENST00000262395 KCNA6P17658 529 aa21.27■■□□□ 1
TRAF4-201ENST00000262395 KSR2Q6VAB6 950 aa21.27■■□□□ 1
TRAF4-201ENST00000262395 ERC1Q8IUD2 1116 aa21.27■■□□□ 1
TRAF4-201ENST00000262395 ZNF165P49910 485 aa21.27■■□□□ 1
TRAF4-201ENST00000262395 DIP2AQ14689 1571 aa21.27■■□□□ 1
TRAF4-201ENST00000262395 CCDC129Q6ZRS4 1044 aa21.27■■□□□ 1
TRAF4-201ENST00000262395 ZNF592Q92610 1267 aa21.27■■□□□ 1
TRAF4-201ENST00000262395 FBXW7Q969H0 707 aa21.27■■□□□ 1
TRAF4-201ENST00000262395 TPM3P06753 285 aa21.26■□□□□ 0.99
TRAF4-201ENST00000262395 PDCP20941 246 aa21.26■□□□□ 0.99
TRAF4-201ENST00000262395 HSP90B1P14625 803 aaKnown RBP21.26■□□□□ 0.99
TRAF4-201ENST00000262395 ZNF75DP51815 510 aa21.26■□□□□ 0.99
TRAF4-201ENST00000262395 GRM8O00222 908 aa21.25■□□□□ 0.99
TRAF4-201ENST00000262395 ARID5BQ14865 1188 aa21.25■□□□□ 0.99
TRAF4-201ENST00000262395 FTOQ9C0B1 505 aaKnown RBP eCLIP21.25■□□□□ 0.99
TRAF4-201ENST00000262395 SCAND2PQ9GZW5 306 aaPredicted RBP21.25■□□□□ 0.99
TRAF4-201ENST00000262395 CCDC144BQ3MJ40 725 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms