RNA–Protein interactions for RNA: ENST00000262105.6

MCM4-201, Transcript of minichromosome maintenance complex component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCM4, Length 4,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-201ENST00000262105 CCDC83Q8IWF9 413 aa19.25■□□□□ 0.67
MCM4-201ENST00000262105 TULP1O00294 542 aaPredicted RBP19.25■□□□□ 0.67
MCM4-201ENST00000262105 ATP2B3Q16720 1220 aa19.25■□□□□ 0.67
MCM4-201ENST00000262105 SSH3Q8TE77 659 aa19.25■□□□□ 0.67
MCM4-201ENST00000262105 MCM4P33991 863 aa19.25■□□□□ 0.67
MCM4-201ENST00000262105 NBPF5PQ86XG9 351 aaPredicted RBP19.25■□□□□ 0.67
MCM4-201ENST00000262105 AMOTL1Q8IY63 956 aa19.24■□□□□ 0.67
MCM4-201ENST00000262105 AIDAQ96BJ3 306 aa19.24■□□□□ 0.67
MCM4-201ENST00000262105 USP21Q9UK80 565 aa19.24■□□□□ 0.67
MCM4-201ENST00000262105 CDCA7Q9BWT1 371 aaPredicted RBP19.24■□□□□ 0.67
MCM4-201ENST00000262105 MYOM1P52179 1685 aa19.24■□□□□ 0.67
MCM4-201ENST00000262105 ZSCAN25Q6NSZ9 544 aa19.24■□□□□ 0.67
MCM4-201ENST00000262105 CWC22Q9HCG8 908 aaKnown RBP19.24■□□□□ 0.67
MCM4-201ENST00000262105 ARHGAP23Q9P227 1491 aa19.23■□□□□ 0.67
MCM4-201ENST00000262105 CCDC191Q8NCU4 936 aa19.23■□□□□ 0.67
MCM4-201ENST00000262105 DBNDD2Q9BQY9 259 aa19.23■□□□□ 0.67
MCM4-201ENST00000262105 IQSEC2Q5JU85 1478 aa19.23■□□□□ 0.67
MCM4-201ENST00000262105 CAVIN1Q6NZI2 390 aaKnown RBP19.23■□□□□ 0.67
MCM4-201ENST00000262105 CHMP4CQ96CF2 233 aa19.23■□□□□ 0.67
MCM4-201ENST00000262105 SLIT1O75093 1534 aa19.23■□□□□ 0.67
MCM4-201ENST00000262105 SLC5A1P13866 664 aa19.22■□□□□ 0.67
MCM4-201ENST00000262105 TDO2P48775 406 aa19.22■□□□□ 0.67
MCM4-201ENST00000262105 KCNQ4P56696 695 aa19.22■□□□□ 0.67
MCM4-201ENST00000262105 HAND2P61296 217 aa19.22■□□□□ 0.67
MCM4-201ENST00000262105 DNTTIP2Q5QJE6 756 aaKnown RBP19.22■□□□□ 0.67
MCM4-201ENST00000262105 BICD2Q8TD16 824 aa19.22■□□□□ 0.67
MCM4-201ENST00000262105 DDX11Q96FC9 970 aa19.22■□□□□ 0.67
MCM4-201ENST00000262105 KDRP35968 1356 aa19.22■□□□□ 0.67
MCM4-201ENST00000262105 MAP2P11137 1827 aaKnown RBP19.22■□□□□ 0.67
MCM4-201ENST00000262105 SSFA2P28290 1259 aa19.22■□□□□ 0.67
MCM4-201ENST00000262105 TRIM29Q14134 588 aa19.22■□□□□ 0.67
MCM4-201ENST00000262105 DRC7Q8IY82 874 aa19.22■□□□□ 0.67
MCM4-201ENST00000262105 UTP14AQ9BVJ6 771 aaKnown RBP19.22■□□□□ 0.67
MCM4-201ENST00000262105 ANKIB1Q9P2G1 1089 aa19.22■□□□□ 0.67
MCM4-201ENST00000262105 CCDC24Q8N4L8 307 aa19.22■□□□□ 0.67
MCM4-201ENST00000262105 PPP1R1BQ9UD71 204 aaPredicted RBP19.22■□□□□ 0.67
MCM4-201ENST00000262105 KDM4FA0A1W2PPD8 638 aa19.21■□□□□ 0.67
MCM4-201ENST00000262105 CEBPZQ03701 1054 aaKnown RBP19.21■□□□□ 0.67
MCM4-201ENST00000262105 NMIQ13287 307 aaPredicted RBP19.21■□□□□ 0.67
MCM4-201ENST00000262105 GNPATO15228 680 aa19.21■□□□□ 0.67
MCM4-201ENST00000262105 LARP1BQ659C4 914 aaKnown RBP19.21■□□□□ 0.67
MCM4-201ENST00000262105 SETDB2Q96T68 719 aa19.21■□□□□ 0.67
MCM4-201ENST00000262105 KIF13AQ9H1H9 1805 aa19.21■□□□□ 0.67
MCM4-201ENST00000262105 TTC41PQ6P2S7 1318 aa19.21■□□□□ 0.67
MCM4-201ENST00000262105 PPFIA3O75145 1194 aa19.21■□□□□ 0.67
MCM4-201ENST00000262105 FERMT3Q86UX7 667 aa19.21■□□□□ 0.67
MCM4-201ENST00000262105 USP26Q9BXU7 913 aa19.21■□□□□ 0.67
MCM4-201ENST00000262105 CCDC152Q4G0S7 254 aa19.2■□□□□ 0.66
MCM4-201ENST00000262105 PIGBQ92521 554 aa19.2■□□□□ 0.66
MCM4-201ENST00000262105 CDC5LQ99459 802 aaKnown RBP19.2■□□□□ 0.66
MCM4-201ENST00000262105 NACAP1Q9BZK3 213 aa19.2■□□□□ 0.66
MCM4-201ENST00000262105 CTNNA3Q9UI47 895 aa19.2■□□□□ 0.66
MCM4-201ENST00000262105 CRB1P82279 1406 aa19.2■□□□□ 0.66
MCM4-201ENST00000262105 KRT32Q14532 448 aa19.2■□□□□ 0.66
MCM4-201ENST00000262105 ANKRD1Q15327 319 aa19.2■□□□□ 0.66
MCM4-201ENST00000262105 CAVIN4Q5BKX8 364 aa19.2■□□□□ 0.66
MCM4-201ENST00000262105 EDC3Q96F86 508 aaKnown RBP19.2■□□□□ 0.66
MCM4-201ENST00000262105 CIZ1Q9ULV3 898 aaPredicted RBP19.2■□□□□ 0.66
MCM4-201ENST00000262105 RBM8AQ9Y5S9 174 aaKnown RBP19.19■□□□□ 0.66
MCM4-201ENST00000262105 EYA2O00167 538 aa19.19■□□□□ 0.66
MCM4-201ENST00000262105 IMMTQ16891 758 aaKnown RBP19.19■□□□□ 0.66
MCM4-201ENST00000262105 U3KPZ7 1027 aaPredicted RBP19.19■□□□□ 0.66
MCM4-201ENST00000262105 TCIRG1Q13488 830 aa19.18■□□□□ 0.66
MCM4-201ENST00000262105 ZBTB1Q9Y2K1 713 aa19.18■□□□□ 0.66
MCM4-201ENST00000262105 CCDC87Q9NVE4 849 aa19.18■□□□□ 0.66
MCM4-201ENST00000262105 DHX16O60231 1041 aaKnown RBP19.18■□□□□ 0.66
MCM4-201ENST00000262105 PDCP20941 246 aa19.18■□□□□ 0.66
MCM4-201ENST00000262105 TNNI3KQ59H18 835 aa19.18■□□□□ 0.66
MCM4-201ENST00000262105 RTCBQ9Y3I0 505 aaKnown RBP19.18■□□□□ 0.66
MCM4-201ENST00000262105 FPGT-TNNI3KV9GXZ4 949 aa19.18■□□□□ 0.66
MCM4-201ENST00000262105 COL3A1P02461 1466 aaPredicted RBP19.18■□□□□ 0.66
MCM4-201ENST00000262105 A0A1B0GUL7 405 aa19.18■□□□□ 0.66
MCM4-201ENST00000262105 MINDY4BA8MYZ0 360 aa19.18■□□□□ 0.66
MCM4-201ENST00000262105 ITGA6P23229 1130 aa19.18■□□□□ 0.66
MCM4-201ENST00000262105 MAP3K12Q12852 859 aa19.18■□□□□ 0.66
MCM4-201ENST00000262105 EAF2Q96CJ1 260 aaPredicted RBP19.18■□□□□ 0.66
MCM4-201ENST00000262105 IFT172Q9UG01 1749 aa19.17■□□□□ 0.66
MCM4-201ENST00000262105 SF3B2Q13435 895 aaKnown RBP19.17■□□□□ 0.66
MCM4-201ENST00000262105 SART3Q15020 963 aaKnown RBP19.17■□□□□ 0.66
MCM4-201ENST00000262105 LRRC2Q9BYS8 371 aa19.17■□□□□ 0.66
MCM4-201ENST00000262105 CCNL1Q9UK58 526 aaPredicted RBP19.17■□□□□ 0.66
MCM4-201ENST00000262105 ATP2B1P20020 1258 aa19.17■□□□□ 0.66
MCM4-201ENST00000262105 TNPO1Q92973 898 aaKnown RBP19.17■□□□□ 0.66
MCM4-201ENST00000262105 CPA1P15085 419 aa19.17■□□□□ 0.66
MCM4-201ENST00000262105 TMX3Q96JJ7 454 aa19.17■□□□□ 0.66
MCM4-201ENST00000262105 PAG1Q9NWQ8 432 aa19.17■□□□□ 0.66
MCM4-201ENST00000262105 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.17■□□□□ 0.66
MCM4-201ENST00000262105 LIMCH1Q9UPQ0 1083 aa19.17■□□□□ 0.66
MCM4-201ENST00000262105 UBR1Q8IWV7 1749 aa19.17■□□□□ 0.66
MCM4-201ENST00000262105 WDR33Q9C0J8 1336 aaKnown RBP19.17■□□□□ 0.66
MCM4-201ENST00000262105 ZNF219Q9P2Y4 722 aaPredicted RBP19.16■□□□□ 0.66
MCM4-201ENST00000262105 NLRP3Q96P20 1036 aa19.16■□□□□ 0.66
MCM4-201ENST00000262105 SH3TC1Q8TE82 1336 aa19.16■□□□□ 0.66
MCM4-201ENST00000262105 ANKRD18AQ8IVF6 992 aa19.16■□□□□ 0.66
MCM4-201ENST00000262105 RASSF8Q8NHQ8 419 aa19.16■□□□□ 0.66
MCM4-201ENST00000262105 ITSN1Q15811 1721 aa19.15■□□□□ 0.66
MCM4-201ENST00000262105 RNF214Q8ND24 703 aa19.15■□□□□ 0.66
MCM4-201ENST00000262105 ZSCAN31Q96LW9 406 aaPredicted RBP19.15■□□□□ 0.66
MCM4-201ENST00000262105 FAM227BQ96M60 508 aa19.15■□□□□ 0.66
MCM4-201ENST00000262105 RPGRQ92834 1020 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms