RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 GIGYF2Q6Y7W6 1299 aaKnown RBP23.29■■□□□ 1.32
TRIM47-201ENST00000254816 SIL1Q9H173 461 aa23.29■■□□□ 1.32
TRIM47-201ENST00000254816 MX1P20591 662 aa23.28■■□□□ 1.32
TRIM47-201ENST00000254816 DEKP35659 375 aaKnown RBP23.28■■□□□ 1.32
TRIM47-201ENST00000254816 MFAP1P55081 439 aaKnown RBP23.28■■□□□ 1.32
TRIM47-201ENST00000254816 HSP90AB4PQ58FF6 505 aa23.28■■□□□ 1.32
TRIM47-201ENST00000254816 DZIP3Q86Y13 1208 aaKnown RBP23.28■■□□□ 1.32
TRIM47-201ENST00000254816 GPTP24298 496 aa23.28■■□□□ 1.32
TRIM47-201ENST00000254816 OSBPL3Q9H4L5 887 aa23.28■■□□□ 1.32
TRIM47-201ENST00000254816 ONECUT3O60422 494 aaPredicted RBP23.27■■□□□ 1.32
TRIM47-201ENST00000254816 FOXO4P98177 505 aa23.27■■□□□ 1.32
TRIM47-201ENST00000254816 COL15A1P39059 1388 aa23.27■■□□□ 1.32
TRIM47-201ENST00000254816 EIF5P55010 431 aaKnown RBP23.26■■□□□ 1.31
TRIM47-201ENST00000254816 RABL6Q3YEC7 729 aaPredicted RBP23.26■■□□□ 1.31
TRIM47-201ENST00000254816 SDSP20132 328 aa23.26■■□□□ 1.31
TRIM47-201ENST00000254816 LMBR1LQ6UX01 489 aa23.26■■□□□ 1.31
TRIM47-201ENST00000254816 TBC1D9Q6ZT07 1266 aa23.26■■□□□ 1.31
TRIM47-201ENST00000254816 BRWD3Q6RI45 1802 aa23.25■■□□□ 1.31
TRIM47-201ENST00000254816 DAXXQ9UER7 740 aaPredicted RBP23.25■■□□□ 1.31
TRIM47-201ENST00000254816 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.25■■□□□ 1.31
TRIM47-201ENST00000254816 ZNF831Q5JPB2 1677 aa23.25■■□□□ 1.31
TRIM47-201ENST00000254816 CHMP3Q9Y3E7 222 aa23.25■■□□□ 1.31
TRIM47-201ENST00000254816 RFX5P48382 616 aaPredicted RBP23.24■■□□□ 1.31
TRIM47-201ENST00000254816 G3BP1Q13283 466 aaKnown RBP eCLIP23.24■■□□□ 1.312e-8■■■■■ 28.9
TRIM47-201ENST00000254816 LINC00116Q8NCU8 138 aa23.24■■□□□ 1.31
TRIM47-201ENST00000254816 SASH1O94885 1247 aa23.24■■□□□ 1.31
TRIM47-201ENST00000254816 FAM89AQ96GI7 184 aa23.24■■□□□ 1.31
TRIM47-201ENST00000254816 UPF2Q9HAU5 1272 aaKnown RBP23.24■■□□□ 1.31
TRIM47-201ENST00000254816 CDC45O75419 566 aa23.23■■□□□ 1.31
TRIM47-201ENST00000254816 TRIM28Q13263 835 aaKnown RBP23.23■■□□□ 1.31
TRIM47-201ENST00000254816 PTPN12Q05209 780 aaKnown RBP23.22■■□□□ 1.31
TRIM47-201ENST00000254816 NLRP10Q86W26 655 aa23.22■■□□□ 1.31
TRIM47-201ENST00000254816 ERC1Q8IUD2 1116 aa23.22■■□□□ 1.31
TRIM47-201ENST00000254816 SYNE4Q8N205 404 aa23.22■■□□□ 1.31
TRIM47-201ENST00000254816 STAP2Q9UGK3 403 aa23.22■■□□□ 1.31
TRIM47-201ENST00000254816 AK9Q5TCS8 1911 aa23.21■■□□□ 1.31
TRIM47-201ENST00000254816 ERVV-1B6SEH8 477 aa23.21■■□□□ 1.31
TRIM47-201ENST00000254816 HSP90AB3PQ58FF7 597 aa23.21■■□□□ 1.31
TRIM47-201ENST00000254816 CLASRPQ8N2M8 674 aaKnown RBP23.2■■□□□ 1.3
TRIM47-201ENST00000254816 TBC1D32Q96NH3 1257 aa23.2■■□□□ 1.3
TRIM47-201ENST00000254816 COPRSQ9NQ92 184 aa23.2■■□□□ 1.3
TRIM47-201ENST00000254816 PCCAP05165 728 aaPredicted RBP23.2■■□□□ 1.3
TRIM47-201ENST00000254816 ZBTB38Q8NAP3 1195 aaPredicted RBP23.19■■□□□ 1.3
TRIM47-201ENST00000254816 LY75O60449 1722 aa23.19■■□□□ 1.3
TRIM47-201ENST00000254816 EP400Q96L91 3159 aa23.19■■□□□ 1.3
TRIM47-201ENST00000254816 SMIM5Q71RC9 77 aa23.19■■□□□ 1.3
TRIM47-201ENST00000254816 UBN2Q6ZU65 1347 aa23.18■■□□□ 1.3
TRIM47-201ENST00000254816 MYH3P11055 1940 aa23.18■■□□□ 1.3
TRIM47-201ENST00000254816 TAF1LQ8IZX4 1826 aa23.18■■□□□ 1.3
TRIM47-201ENST00000254816 AACSQ86V21 672 aa23.17■■□□□ 1.3
TRIM47-201ENST00000254816 CCDC85AQ96PX6 553 aaPredicted RBP23.17■■□□□ 1.3
TRIM47-201ENST00000254816 C22orf23Q9BZE7 217 aa23.17■■□□□ 1.3
TRIM47-201ENST00000254816 TRIM6-TRIM34B2RNG4 842 aa23.17■■□□□ 1.3
TRIM47-201ENST00000254816 CAMTA2O94983 1202 aa23.17■■□□□ 1.3
TRIM47-201ENST00000254816 MAP4K4O95819 1239 aaPredicted RBP23.17■■□□□ 1.3
TRIM47-201ENST00000254816 PI4K2BQ8TCG2 481 aa23.17■■□□□ 1.3
TRIM47-201ENST00000254816 ZNF34Q8IZ26 560 aa23.16■■□□□ 1.3
TRIM47-201ENST00000254816 RILPL2Q969X0 211 aa23.16■■□□□ 1.3
TRIM47-201ENST00000254816 EAF2Q96CJ1 260 aaPredicted RBP23.16■■□□□ 1.3
TRIM47-201ENST00000254816 BCORQ6W2J9 1755 aa23.16■■□□□ 1.3
TRIM47-201ENST00000254816 IFIT2P09913 472 aaKnown RBP23.16■■□□□ 1.3
TRIM47-201ENST00000254816 ZNF594Q96JF6 807 aaPredicted RBP23.16■■□□□ 1.3
TRIM47-201ENST00000254816 CCDC8Q9H0W5 538 aaPredicted RBP23.16■■□□□ 1.3
TRIM47-201ENST00000254816 TRMT112Q9UI30 125 aaKnown RBP23.16■■□□□ 1.3
TRIM47-201ENST00000254816 AOX1Q06278 1338 aa23.16■■□□□ 1.3
TRIM47-201ENST00000254816 CCNL1Q9UK58 526 aaPredicted RBP23.15■■□□□ 1.3
TRIM47-201ENST00000254816 FAM177BA6PVY3 158 aa23.15■■□□□ 1.3
TRIM47-201ENST00000254816 TFCP2Q12800 502 aa23.14■■□□□ 1.29
TRIM47-201ENST00000254816 TLR7Q9NYK1 1049 aaKnown RBP23.14■■□□□ 1.29
TRIM47-201ENST00000254816 CDHR2Q9BYE9 1310 aa23.12■■□□□ 1.29
TRIM47-201ENST00000254816 CNTNAP4Q9C0A0 1308 aa23.12■■□□□ 1.29
TRIM47-201ENST00000254816 USP42Q9H9J4 1324 aaKnown RBP23.12■■□□□ 1.29
TRIM47-201ENST00000254816 SUSD4Q5VX71 490 aa23.12■■□□□ 1.29
TRIM47-201ENST00000254816 KRT27Q7Z3Y8 459 aa23.12■■□□□ 1.29
TRIM47-201ENST00000254816 PLA2G12BQ9BX93 195 aa23.12■■□□□ 1.29
TRIM47-201ENST00000254816 IRS4O14654 1257 aaPredicted RBP23.11■■□□□ 1.29
TRIM47-201ENST00000254816 TTC41PQ6P2S7 1318 aa23.11■■□□□ 1.29
TRIM47-201ENST00000254816 LRRC24Q50LG9 513 aa23.11■■□□□ 1.29
TRIM47-201ENST00000254816 ATG9AQ7Z3C6 839 aa23.11■■□□□ 1.29
TRIM47-201ENST00000254816 ECHDC1Q9NTX5 307 aa23.11■■□□□ 1.29
TRIM47-201ENST00000254816 CASC1Q6TDU7 716 aa23.1■■□□□ 1.29
TRIM47-201ENST00000254816 BCL11BQ9C0K0 894 aaPredicted RBP23.1■■□□□ 1.29
TRIM47-201ENST00000254816 CSF1RP07333 972 aa23.1■■□□□ 1.29
TRIM47-201ENST00000254816 CCDC57Q2TAC2 916 aa23.1■■□□□ 1.29
TRIM47-201ENST00000254816 PUS3Q9BZE2 481 aaKnown RBP23.1■■□□□ 1.29
TRIM47-201ENST00000254816 NIP7Q9Y221 180 aaKnown RBP eCLIP23.1■■□□□ 1.29
TRIM47-201ENST00000254816 GNPATO15228 680 aa23.08■■□□□ 1.29
TRIM47-201ENST00000254816 TNNI3KQ59H18 835 aa23.08■■□□□ 1.29
TRIM47-201ENST00000254816 FPGT-TNNI3KV9GXZ4 949 aa23.08■■□□□ 1.29
TRIM47-201ENST00000254816 TTLL11Q8NHH1 800 aa23.08■■□□□ 1.29
TRIM47-201ENST00000254816 GPATCH3Q96I76 525 aa23.08■■□□□ 1.29
TRIM47-201ENST00000254816 DDX60Q8IY21 1712 aaKnown RBP23.08■■□□□ 1.28
TRIM47-201ENST00000254816 GLRX3O76003 335 aaKnown RBP23.07■■□□□ 1.28
TRIM47-201ENST00000254816 CTSWP56202 376 aa23.07■■□□□ 1.28
TRIM47-201ENST00000254816 RC3H1Q5TC82 1133 aaKnown RBP23.07■■□□□ 1.28
TRIM47-201ENST00000254816 ZNF772Q68DY9 489 aaPredicted RBP23.07■■□□□ 1.28
TRIM47-201ENST00000254816 AMIGO3Q86WK7 504 aa23.07■■□□□ 1.28
TRIM47-201ENST00000254816 GREM2Q9H772 168 aa23.07■■□□□ 1.28
TRIM47-201ENST00000254816 C4BP0C0L5 1744 aa23.07■■□□□ 1.28
TRIM47-201ENST00000254816 SCN7AQ01118 1682 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 167.3 ms