RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.1■■□□□ 1.45
RARA-201ENST00000254066 CCDC83Q8IWF9 413 aa24.1■■□□□ 1.45
RARA-201ENST00000254066 ZNF446Q9NWS9 450 aa24.1■■□□□ 1.45
RARA-201ENST00000254066 STK26Q9P289 416 aa24.1■■□□□ 1.45
RARA-201ENST00000254066 EDC4Q6P2E9 1401 aaKnown RBP24.1■■□□□ 1.45
RARA-201ENST00000254066 VPS37CA5D8V6 355 aaPredicted RBP24.09■■□□□ 1.45
RARA-201ENST00000254066 GOLGA6L4A6NEF3 574 aa24.09■■□□□ 1.45
RARA-201ENST00000254066 HNRNPH2P55795 449 aaKnown RBP24.09■■□□□ 1.45
RARA-201ENST00000254066 CAMK4Q16566 473 aa24.09■■□□□ 1.45
RARA-201ENST00000254066 MUM1L1Q5H9M0 696 aa24.09■■□□□ 1.45
RARA-201ENST00000254066 RASEFQ8IZ41 740 aa24.09■■□□□ 1.45
RARA-201ENST00000254066 KCNB2Q92953 911 aa24.09■■□□□ 1.45
RARA-201ENST00000254066 ERBB3P21860 1342 aa24.09■■□□□ 1.45
RARA-201ENST00000254066 NWD1Q149M9 1564 aa24.09■■□□□ 1.45
RARA-201ENST00000254066 RAB11FIP3O75154 756 aa24.09■■□□□ 1.45
RARA-201ENST00000254066 SKILP12757 684 aa24.09■■□□□ 1.45
RARA-201ENST00000254066 CHD2O14647 1828 aaKnown RBP24.09■■□□□ 1.45
RARA-201ENST00000254066 CCAR2Q8N163 923 aaKnown RBP24.08■■□□□ 1.45
RARA-201ENST00000254066 PDRG1Q9NUG6 133 aa24.08■■□□□ 1.45
RARA-201ENST00000254066 FEZ2Q9UHY8 353 aaPredicted RBP24.08■■□□□ 1.45
RARA-201ENST00000254066 LARGE1O95461 756 aa24.08■■□□□ 1.44
RARA-201ENST00000254066 CKAP2LQ8IYA6 745 aa24.08■■□□□ 1.44
RARA-201ENST00000254066 SLC26A8Q96RN1 970 aa24.08■■□□□ 1.44
RARA-201ENST00000254066 ZSWIM6Q9HCJ5 1215 aa24.08■■□□□ 1.44
RARA-201ENST00000254066 CASTP20810 708 aaKnown RBP24.07■■□□□ 1.44
RARA-201ENST00000254066 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.07■■□□□ 1.44
RARA-201ENST00000254066 CNTROBQ8N137 903 aa24.07■■□□□ 1.44
RARA-201ENST00000254066 TXLNBQ8N3L3 684 aa24.07■■□□□ 1.44
RARA-201ENST00000254066 EFCC1Q9HA90 598 aa24.07■■□□□ 1.44
RARA-201ENST00000254066 FHOD1Q9Y613 1164 aa24.07■■□□□ 1.44
RARA-201ENST00000254066 DIP2AQ14689 1571 aa24.06■■□□□ 1.44
RARA-201ENST00000254066 GOLGA6L19H0YKK7 550 aa24.06■■□□□ 1.44
RARA-201ENST00000254066 ATP8B1O43520 1251 aa24.06■■□□□ 1.44
RARA-201ENST00000254066 LARP1BQ659C4 914 aaKnown RBP24.06■■□□□ 1.44
RARA-201ENST00000254066 SLC4A10Q6U841 1118 aa24.06■■□□□ 1.44
RARA-201ENST00000254066 TPM4P67936 248 aa24.06■■□□□ 1.44
RARA-201ENST00000254066 TBX22Q9Y458 520 aa24.06■■□□□ 1.44
RARA-201ENST00000254066 NRKQ7Z2Y5 1582 aa24.06■■□□□ 1.44
RARA-201ENST00000254066 CRYBG1Q9Y4K1 1723 aa24.06■■□□□ 1.44
RARA-201ENST00000254066 PNMA6EA0A0J9YXQ4 647 aa24.05■■□□□ 1.44
RARA-201ENST00000254066 FBLN1P23142 703 aa24.05■■□□□ 1.44
RARA-201ENST00000254066 GSDMDP57764 484 aa24.05■■□□□ 1.44
RARA-201ENST00000254066 PIP4K2BP78356 416 aa24.05■■□□□ 1.44
RARA-201ENST00000254066 DHX8Q14562 1220 aaKnown RBP24.05■■□□□ 1.44
RARA-201ENST00000254066 KCNG1Q9UIX4 513 aa24.05■■□□□ 1.44
RARA-201ENST00000254066 CYP46A1Q9Y6A2 500 aa24.05■■□□□ 1.44
RARA-201ENST00000254066 USP27XA6NNY8 438 aa24.05■■□□□ 1.44
RARA-201ENST00000254066 CCZ1BP86790 482 aa24.05■■□□□ 1.44
RARA-201ENST00000254066 CCZ1P86791 482 aaPredicted RBP24.05■■□□□ 1.44
RARA-201ENST00000254066 IQCB1Q15051 598 aa24.05■■□□□ 1.44
RARA-201ENST00000254066 GIGYF1O75420 1035 aaPredicted RBP24.04■■□□□ 1.44
RARA-201ENST00000254066 KCNJ6P48051 423 aa24.04■■□□□ 1.44
RARA-201ENST00000254066 ITSN1Q15811 1721 aa24.04■■□□□ 1.44
RARA-201ENST00000254066 SPATA32Q96LK8 384 aa24.04■■□□□ 1.44
RARA-201ENST00000254066 ALKQ9UM73 1620 aa24.04■■□□□ 1.44
RARA-201ENST00000254066 N4BP2Q86UW6 1770 aaPredicted RBP24.04■■□□□ 1.44
RARA-201ENST00000254066 PI4K2BQ8TCG2 481 aa24.04■■□□□ 1.44
RARA-201ENST00000254066 RUFY2Q8WXA3 655 aa24.04■■□□□ 1.44
RARA-201ENST00000254066 DNAJC25Q9H1X3 360 aa24.04■■□□□ 1.44
RARA-201ENST00000254066 SOS1Q07889 1333 aaPredicted RBP24.04■■□□□ 1.44
RARA-201ENST00000254066 FILIP1Q7Z7B0 1213 aa24.03■■□□□ 1.44
RARA-201ENST00000254066 ARGLU1Q9NWB6 273 aaPredicted RBP24.03■■□□□ 1.44
RARA-201ENST00000254066 CRB1P82279 1406 aa24.03■■□□□ 1.44
RARA-201ENST00000254066 CTAGE5O15320 804 aa24.03■■□□□ 1.44
RARA-201ENST00000254066 RAD51AP2Q09MP3 1159 aa24.03■■□□□ 1.44
RARA-201ENST00000254066 CCDC93Q567U6 631 aa24.03■■□□□ 1.44
RARA-201ENST00000254066 TRIM34Q9BYJ4 488 aa24.03■■□□□ 1.44
RARA-201ENST00000254066 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.03■■□□□ 1.44
RARA-201ENST00000254066 V9GYY5 206 aaPredicted RBP24.03■■□□□ 1.44
RARA-201ENST00000254066 DLC1Q96QB1 1528 aa24.03■■□□□ 1.44
RARA-201ENST00000254066 PNMA6AP0CW24 399 aaPredicted RBP24.02■■□□□ 1.44
RARA-201ENST00000254066 NUTM2DQ5VT03 806 aaPredicted RBP24.02■■□□□ 1.44
RARA-201ENST00000254066 ST7Q9NRC1 585 aa24.02■■□□□ 1.44
RARA-201ENST00000254066 CCDC69A6NI79 296 aa24.02■■□□□ 1.44
RARA-201ENST00000254066 LEO1Q8WVC0 666 aaPredicted RBP24.02■■□□□ 1.44
RARA-201ENST00000254066 XIRP1Q702N8 1843 aaKnown RBP24.02■■□□□ 1.44
RARA-201ENST00000254066 F6X3S4 739 aa24.01■■□□□ 1.43
RARA-201ENST00000254066 ST3GAL1Q11201 340 aa24.01■■□□□ 1.43
RARA-201ENST00000254066 IMPACTQ9P2X3 320 aa24.01■■□□□ 1.43
RARA-201ENST00000254066 ZRANB2O95218 330 aaKnown RBP eCLIP24.01■■□□□ 1.43
RARA-201ENST00000254066 CLCN6P51797 869 aa24.01■■□□□ 1.43
RARA-201ENST00000254066 SSH3Q8TE77 659 aa24.01■■□□□ 1.43
RARA-201ENST00000254066 TMEM94Q12767 1356 aa24.01■■□□□ 1.43
RARA-201ENST00000254066 PXDNLA1KZ92 1463 aa24.01■■□□□ 1.43
RARA-201ENST00000254066 SETD1AO15047 1707 aaKnown RBP24■■□□□ 1.43
RARA-201ENST00000254066 PSDA5PKW4 1024 aaPredicted RBP24■■□□□ 1.43
RARA-201ENST00000254066 PLA2G4AP47712 749 aa24■■□□□ 1.43
RARA-201ENST00000254066 ME3Q16798 604 aa24■■□□□ 1.43
RARA-201ENST00000254066 AXDND1Q5T1B0 1012 aaPredicted RBP24■■□□□ 1.43
RARA-201ENST00000254066 G2E3Q7L622 706 aa24■■□□□ 1.43
RARA-201ENST00000254066 PROSER2Q86WR7 435 aaPredicted RBP24■■□□□ 1.43
RARA-201ENST00000254066 LARP6Q9BRS8 491 aaKnown RBP24■■□□□ 1.43
RARA-201ENST00000254066 XRN1Q8IZH2 1706 aaKnown RBP23.99■■□□□ 1.43
RARA-201ENST00000254066 SNW1Q13573 536 aaKnown RBP23.99■■□□□ 1.43
RARA-201ENST00000254066 CDC37L1Q7L3B6 337 aa23.99■■□□□ 1.43
RARA-201ENST00000254066 JAKMIP1Q96N16 626 aaKnown RBP23.99■■□□□ 1.43
RARA-201ENST00000254066 CHMP3Q9Y3E7 222 aa23.99■■□□□ 1.43
RARA-201ENST00000254066 USP42Q9H9J4 1324 aaKnown RBP23.99■■□□□ 1.43
RARA-201ENST00000254066 OSBPL5Q9H0X9 879 aaPredicted RBP23.99■■□□□ 1.43
RARA-201ENST00000254066 TPM1P09493 284 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms