RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 NYXQ9GZU5 481 aa17.88■□□□□ 0.45
VPS25-201ENST00000253794 CWC25Q9NXE8 425 aaPredicted RBP17.88■□□□□ 0.45
VPS25-201ENST00000253794 ATF5Q9Y2D1 282 aaPredicted RBP17.88■□□□□ 0.45
VPS25-201ENST00000253794 PARP3Q9Y6F1 533 aa17.88■□□□□ 0.45
VPS25-201ENST00000253794 LRP5O75197 1615 aa17.87■□□□□ 0.45
VPS25-201ENST00000253794 GCKRQ14397 625 aa17.87■□□□□ 0.45
VPS25-201ENST00000253794 CWF19L2Q2TBE0 894 aaKnown RBP17.87■□□□□ 0.45
VPS25-201ENST00000253794 DZIP1LQ8IYY4 767 aaKnown RBP17.87■□□□□ 0.45
VPS25-201ENST00000253794 TNNQ9UQP3 1299 aa17.87■□□□□ 0.45
VPS25-201ENST00000253794 C10orf71Q711Q0 1435 aa17.87■□□□□ 0.45
VPS25-201ENST00000253794 AFDNP55196 1824 aaKnown RBP17.86■□□□□ 0.45
VPS25-201ENST00000253794 PCCAP05165 728 aaPredicted RBP17.86■□□□□ 0.45
VPS25-201ENST00000253794 PRR5LQ6MZQ0 368 aa17.86■□□□□ 0.45
VPS25-201ENST00000253794 SLC4A10Q6U841 1118 aa17.86■□□□□ 0.45
VPS25-201ENST00000253794 TPTE2Q6XPS3 522 aa17.86■□□□□ 0.45
VPS25-201ENST00000253794 NBPF5PQ86XG9 351 aaPredicted RBP17.86■□□□□ 0.45
VPS25-201ENST00000253794 UTP14AQ9BVJ6 771 aaKnown RBP17.86■□□□□ 0.45
VPS25-201ENST00000253794 UTYO14607 1347 aa17.86■□□□□ 0.45
VPS25-201ENST00000253794 H7C1W4 665 aa17.85■□□□□ 0.45
VPS25-201ENST00000253794 RLBP1P12271 317 aa17.85■□□□□ 0.45
VPS25-201ENST00000253794 SLC10A5Q5PT55 438 aa17.85■□□□□ 0.45
VPS25-201ENST00000253794 ZBTB38Q8NAP3 1195 aaPredicted RBP17.85■□□□□ 0.45
VPS25-201ENST00000253794 CDHR2Q9BYE9 1310 aa17.85■□□□□ 0.45
VPS25-201ENST00000253794 PLIN1O60240 522 aa17.84■□□□□ 0.45
VPS25-201ENST00000253794 CENPBP07199 599 aaPredicted RBP17.84■□□□□ 0.45
VPS25-201ENST00000253794 CASP7P55210 303 aa17.84■□□□□ 0.45
VPS25-201ENST00000253794 FTSJ3Q8IY81 847 aaKnown RBP17.84■□□□□ 0.45
VPS25-201ENST00000253794 CNBD1Q8NA66 436 aa17.84■□□□□ 0.45
VPS25-201ENST00000253794 TRMT112Q9UI30 125 aaKnown RBP17.84■□□□□ 0.45
VPS25-201ENST00000253794 KIF13BQ9NQT8 1826 aa17.84■□□□□ 0.45
VPS25-201ENST00000253794 SH3TC1Q8TE82 1336 aa17.83■□□□□ 0.44
VPS25-201ENST00000253794 GRM8O00222 908 aa17.83■□□□□ 0.44
VPS25-201ENST00000253794 TMEM57Q8N5G2 664 aa17.83■□□□□ 0.44
VPS25-201ENST00000253794 CLUAP1Q96AJ1 413 aa17.83■□□□□ 0.44
VPS25-201ENST00000253794 ABCC12Q96J65 1359 aa17.82■□□□□ 0.44
VPS25-201ENST00000253794 LAMB2P55268 1798 aa17.82■□□□□ 0.44
VPS25-201ENST00000253794 KLRG2A4D1S0 409 aaPredicted RBP17.82■□□□□ 0.44
VPS25-201ENST00000253794 USP44Q9H0E7 712 aa17.82■□□□□ 0.44
VPS25-201ENST00000253794 HSP90B1P14625 803 aaKnown RBP17.81■□□□□ 0.44
VPS25-201ENST00000253794 ST5P78524 1137 aa17.81■□□□□ 0.44
VPS25-201ENST00000253794 ERFEQ4G0M1 354 aa17.81■□□□□ 0.44
VPS25-201ENST00000253794 PANK1Q8TE04 598 aa17.81■□□□□ 0.44
VPS25-201ENST00000253794 FAM89AQ96GI7 184 aa17.81■□□□□ 0.44
VPS25-201ENST00000253794 BRIP1Q9BX63 1249 aa17.81■□□□□ 0.44
VPS25-201ENST00000253794 PLA2G12BQ9BX93 195 aa17.81■□□□□ 0.44
VPS25-201ENST00000253794 SRCAPQ6ZRS2 3230 aa17.8■□□□□ 0.44
VPS25-201ENST00000253794 C20orf194Q5TEA3 1177 aa17.8■□□□□ 0.44
VPS25-201ENST00000253794 NUTM1Q86Y26 1132 aa17.8■□□□□ 0.44
VPS25-201ENST00000253794 PDZRN3Q9UPQ7 1066 aa17.8■□□□□ 0.44
VPS25-201ENST00000253794 CD2APQ9Y5K6 639 aa17.8■□□□□ 0.44
VPS25-201ENST00000253794 DDX60Q8IY21 1712 aaKnown RBP17.79■□□□□ 0.44
VPS25-201ENST00000253794 FAM177BA6PVY3 158 aa17.79■□□□□ 0.44
VPS25-201ENST00000253794 MVPQ14764 893 aaKnown RBP17.79■□□□□ 0.44
VPS25-201ENST00000253794 UBE3BQ7Z3V4 1068 aa17.79■□□□□ 0.44
VPS25-201ENST00000253794 C9orf78Q9NZ63 289 aaPredicted RBP17.79■□□□□ 0.44
VPS25-201ENST00000253794 SUPT16HQ9Y5B9 1047 aaKnown RBP17.79■□□□□ 0.44
VPS25-201ENST00000253794 ANKRD31Q8N7Z5 1873 aa17.79■□□□□ 0.44
VPS25-201ENST00000253794 TNRC6CQ9HCJ0 1690 aaKnown RBP17.78■□□□□ 0.44
VPS25-201ENST00000253794 IRS4O14654 1257 aaPredicted RBP17.78■□□□□ 0.44
VPS25-201ENST00000253794 NBPF7P0C2Y1 421 aaPredicted RBP17.78■□□□□ 0.44
VPS25-201ENST00000253794 CRY2Q49AN0 593 aa17.78■□□□□ 0.44
VPS25-201ENST00000253794 SYNE4Q8N205 404 aa17.78■□□□□ 0.44
VPS25-201ENST00000253794 DDX19BQ9UMR2 479 aa17.78■□□□□ 0.44
VPS25-201ENST00000253794 KIAA1551Q9HCM1 1747 aa17.78■□□□□ 0.44
VPS25-201ENST00000253794 ZBTB7BO15156 539 aaPredicted RBP17.77■□□□□ 0.44
VPS25-201ENST00000253794 GNAI3P08754 354 aa17.77■□□□□ 0.44
VPS25-201ENST00000253794 GTF2E1P29083 439 aaPredicted RBP17.77■□□□□ 0.44
VPS25-201ENST00000253794 PDE6BP35913 854 aa17.77■□□□□ 0.44
VPS25-201ENST00000253794 ITPRIPQ8IWB1 547 aa17.77■□□□□ 0.44
VPS25-201ENST00000253794 NPHP1O15259 732 aa17.76■□□□□ 0.43
VPS25-201ENST00000253794 PDE8AO60658 829 aa17.76■□□□□ 0.43
VPS25-201ENST00000253794 TGFB2P61812 414 aa17.76■□□□□ 0.43
VPS25-201ENST00000253794 SF3B3Q15393 1217 aaKnown RBP17.76■□□□□ 0.43
VPS25-201ENST00000253794 MEIS3Q99687 375 aa17.76■□□□□ 0.43
VPS25-201ENST00000253794 HDAC5Q9UQL6 1122 aa17.76■□□□□ 0.43
VPS25-201ENST00000253794 HCLS1P14317 486 aaPredicted RBP17.75■□□□□ 0.43
VPS25-201ENST00000253794 KAZALD1Q96I82 304 aa17.75■□□□□ 0.43
VPS25-201ENST00000253794 NLRP3Q96P20 1036 aa17.75■□□□□ 0.43
VPS25-201ENST00000253794 CHMP4BQ9H444 224 aaKnown RBP17.75■□□□□ 0.43
VPS25-201ENST00000253794 COG6Q9Y2V7 657 aa17.75■□□□□ 0.43
VPS25-201ENST00000253794 RTL9Q8NET4 1388 aa17.75■□□□□ 0.43
VPS25-201ENST00000253794 CSF1RP07333 972 aa17.74■□□□□ 0.43
VPS25-201ENST00000253794 UBTFL1P0CB47 393 aaPredicted RBP17.74■□□□□ 0.43
VPS25-201ENST00000253794 FOXO4P98177 505 aa17.74■□□□□ 0.43
VPS25-201ENST00000253794 RABL6Q3YEC7 729 aaPredicted RBP17.74■□□□□ 0.43
VPS25-201ENST00000253794 CCDC24Q8N4L8 307 aa17.74■□□□□ 0.43
VPS25-201ENST00000253794 SUCLG2Q96I99 432 aa17.74■□□□□ 0.43
VPS25-201ENST00000253794 COL11A2P13942 1736 aaPredicted RBP17.73■□□□□ 0.43
VPS25-201ENST00000253794 HOXA10P31260 410 aaPredicted RBP17.73■□□□□ 0.43
VPS25-201ENST00000253794 CTSWP56202 376 aa17.73■□□□□ 0.43
VPS25-201ENST00000253794 RTL5Q5HYW3 569 aaPredicted RBP17.73■□□□□ 0.43
VPS25-201ENST00000253794 C3orf67Q6ZVT6 689 aa17.73■□□□□ 0.43
VPS25-201ENST00000253794 JARID2Q92833 1246 aaPredicted RBP17.73■□□□□ 0.43
VPS25-201ENST00000253794 ZBTB40Q9NUA8 1239 aa17.73■□□□□ 0.43
VPS25-201ENST00000253794 DLEC1Q9Y238 1755 aa17.73■□□□□ 0.43
VPS25-201ENST00000253794 SRGNP10124 158 aa17.72■□□□□ 0.43
VPS25-201ENST00000253794 TTLL11Q8NHH1 800 aa17.72■□□□□ 0.43
VPS25-201ENST00000253794 FHDC1Q9C0D6 1143 aaPredicted RBP17.72■□□□□ 0.43
VPS25-201ENST00000253794 MYH3P11055 1940 aa17.71■□□□□ 0.43
VPS25-201ENST00000253794 GNAI2P04899 355 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms