RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 KCPQ6ZWJ8 1503 aa26.23■■□□□ 1.79
CLN6-201ENST00000249806 ERBB4Q15303 1308 aa26.23■■□□□ 1.79
CLN6-201ENST00000249806 GOLGA6L22H0YM25 854 aa26.22■■□□□ 1.79
CLN6-201ENST00000249806 SKOR2Q2VWA4 1001 aaPredicted RBP26.22■■□□□ 1.79
CLN6-201ENST00000249806 L1TD1Q5T7N2 865 aaKnown RBP26.22■■□□□ 1.79
CLN6-201ENST00000249806 MCTP1Q6DN14 999 aa26.22■■□□□ 1.79
CLN6-201ENST00000249806 PTMSP20962 102 aa26.2■■□□□ 1.79
CLN6-201ENST00000249806 ZBTB3Q9H5J0 574 aa26.2■■□□□ 1.79
CLN6-201ENST00000249806 TFCP2Q12800 502 aa26.2■■□□□ 1.78
CLN6-201ENST00000249806 FAM227BQ96M60 508 aa26.2■■□□□ 1.78
CLN6-201ENST00000249806 LMBR1LQ6UX01 489 aa26.19■■□□□ 1.78
CLN6-201ENST00000249806 BTG4Q9NY30 223 aa26.19■■□□□ 1.78
CLN6-201ENST00000249806 COL15A1P39059 1388 aa26.19■■□□□ 1.78
CLN6-201ENST00000249806 NHSL1Q5SYE7 1610 aa26.19■■□□□ 1.78
CLN6-201ENST00000249806 H7C1W4 665 aa26.18■■□□□ 1.78
CLN6-201ENST00000249806 FOXD4L5Q5VV16 416 aaPredicted RBP26.18■■□□□ 1.78
CLN6-201ENST00000249806 FOXD4L4Q8WXT5 416 aaPredicted RBP26.18■■□□□ 1.78
CLN6-201ENST00000249806 XRCC6P12956 609 aaKnown RBP eCLIP26.18■■□□□ 1.78
CLN6-201ENST00000249806 FOXO4P98177 505 aa26.18■■□□□ 1.78
CLN6-201ENST00000249806 CHAMP1Q96JM3 812 aa26.18■■□□□ 1.78
CLN6-201ENST00000249806 NMIQ13287 307 aaPredicted RBP26.17■■□□□ 1.78
CLN6-201ENST00000249806 TNNI3KQ59H18 835 aa26.17■■□□□ 1.78
CLN6-201ENST00000249806 INTS4Q96HW7 963 aaKnown RBP26.17■■□□□ 1.78
CLN6-201ENST00000249806 DBNLQ9UJU6 430 aaKnown RBP26.17■■□□□ 1.78
CLN6-201ENST00000249806 CHMP3Q9Y3E7 222 aa26.17■■□□□ 1.78
CLN6-201ENST00000249806 FPGT-TNNI3KV9GXZ4 949 aa26.17■■□□□ 1.78
CLN6-201ENST00000249806 PAPPAQ13219 1627 aa26.17■■□□□ 1.78
CLN6-201ENST00000249806 CPA1P15085 419 aa26.16■■□□□ 1.78
CLN6-201ENST00000249806 EDC3Q96F86 508 aaKnown RBP26.16■■□□□ 1.78
CLN6-201ENST00000249806 LARP6Q9BRS8 491 aaKnown RBP26.16■■□□□ 1.78
CLN6-201ENST00000249806 CWC25Q9NXE8 425 aaPredicted RBP26.16■■□□□ 1.78
CLN6-201ENST00000249806 TMOD3Q9NYL9 352 aa26.16■■□□□ 1.78
CLN6-201ENST00000249806 PRPF40BQ6NWY9 871 aaKnown RBP26.16■■□□□ 1.78
CLN6-201ENST00000249806 TTC14Q96N46 770 aa26.16■■□□□ 1.78
CLN6-201ENST00000249806 FSD1Q9BTV5 496 aa26.15■■□□□ 1.78
CLN6-201ENST00000249806 DDX49Q9Y6V7 483 aaKnown RBP26.15■■□□□ 1.78
CLN6-201ENST00000249806 TNS2Q63HR2 1409 aa26.15■■□□□ 1.78
CLN6-201ENST00000249806 TOGARAM1Q9Y4F4 1720 aa26.15■■□□□ 1.78
CLN6-201ENST00000249806 ASAP1Q9ULH1 1129 aa26.14■■□□□ 1.78
CLN6-201ENST00000249806 NUP188Q5SRE5 1749 aa26.14■■□□□ 1.77
CLN6-201ENST00000249806 A0A0D9SFI3 127 aa26.14■■□□□ 1.77
CLN6-201ENST00000249806 CASTP20810 708 aaKnown RBP26.14■■□□□ 1.77
CLN6-201ENST00000249806 AK2P54819 239 aa26.14■■□□□ 1.77
CLN6-201ENST00000249806 ADCK5Q3MIX3 580 aa26.14■■□□□ 1.77
CLN6-201ENST00000249806 RTN4Q9NQC3 1192 aaKnown RBP26.14■■□□□ 1.77
CLN6-201ENST00000249806 LMBRD1Q9NUN5 540 aa26.14■■□□□ 1.77
CLN6-201ENST00000249806 ZNF330Q9Y3S2 320 aaPredicted RBP26.14■■□□□ 1.77
CLN6-201ENST00000249806 CCDC171Q6TFL3 1326 aa26.13■■□□□ 1.77
CLN6-201ENST00000249806 PIGBQ92521 554 aa26.13■■□□□ 1.77
CLN6-201ENST00000249806 NDUFB9Q9Y6M9 179 aa26.13■■□□□ 1.77
CLN6-201ENST00000249806 HIP1O00291 1037 aa26.12■■□□□ 1.77
CLN6-201ENST00000249806 NECTIN1Q15223 517 aa26.12■■□□□ 1.77
CLN6-201ENST00000249806 DBNDD2Q9BQY9 259 aa26.12■■□□□ 1.77
CLN6-201ENST00000249806 KLHL40Q2TBA0 621 aa26.11■■□□□ 1.77
CLN6-201ENST00000249806 GAS2L3Q86XJ1 694 aa26.11■■□□□ 1.77
CLN6-201ENST00000249806 PANK2Q9BZ23 570 aa26.11■■□□□ 1.77
CLN6-201ENST00000249806 BRD1O95696 1058 aa26.11■■□□□ 1.77
CLN6-201ENST00000249806 ATP5JP18859 108 aa26.11■■□□□ 1.77
CLN6-201ENST00000249806 RUFY3Q7L099 469 aa26.11■■□□□ 1.77
CLN6-201ENST00000249806 CCDC191Q8NCU4 936 aa26.11■■□□□ 1.77
CLN6-201ENST00000249806 RBM8AQ9Y5S9 174 aaKnown RBP26.11■■□□□ 1.77
CLN6-201ENST00000249806 KAT6BQ8WYB5 2073 aa26.11■■□□□ 1.77
CLN6-201ENST00000249806 MAP4K1Q92918 833 aa26.1■■□□□ 1.77
CLN6-201ENST00000249806 JAKMIP1Q96N16 626 aaKnown RBP26.1■■□□□ 1.77
CLN6-201ENST00000249806 PRPF40AO75400 957 aaKnown RBP26.1■■□□□ 1.77
CLN6-201ENST00000249806 DNAJC10Q8IXB1 793 aa26.09■■□□□ 1.77
CLN6-201ENST00000249806 KCNB2Q92953 911 aa26.09■■□□□ 1.77
CLN6-201ENST00000249806 CCDC9Q9Y3X0 531 aaKnown RBP26.09■■□□□ 1.77
CLN6-201ENST00000249806 TJP1Q07157 1748 aa26.09■■□□□ 1.77
CLN6-201ENST00000249806 ATG9AQ7Z3C6 839 aa26.08■■□□□ 1.77
CLN6-201ENST00000249806 KCNJ4P48050 445 aa26.08■■□□□ 1.77
CLN6-201ENST00000249806 SNRKQ9NRH2 765 aa26.08■■□□□ 1.77
CLN6-201ENST00000249806 ATG3Q9NT62 314 aa26.08■■□□□ 1.77
CLN6-201ENST00000249806 LIMCH1Q9UPQ0 1083 aa26.08■■□□□ 1.77
CLN6-201ENST00000249806 MRE11P49959 708 aa26.07■■□□□ 1.76
CLN6-201ENST00000249806 CREB3L3Q68CJ9 461 aa26.07■■□□□ 1.76
CLN6-201ENST00000249806 ZNF589Q86UQ0 364 aaPredicted RBP26.07■■□□□ 1.76
CLN6-201ENST00000249806 ZNF594Q96JF6 807 aaPredicted RBP26.07■■□□□ 1.76
CLN6-201ENST00000249806 NCLP19338 710 aaKnown RBP26.07■■□□□ 1.76
CLN6-201ENST00000249806 GRPEL1Q9HAV7 217 aa26.07■■□□□ 1.76
CLN6-201ENST00000249806 CHGBP05060 677 aa26.06■■□□□ 1.76
CLN6-201ENST00000249806 DNAJC2Q99543 621 aaKnown RBP26.06■■□□□ 1.76
CLN6-201ENST00000249806 ZSWIM6Q9HCJ5 1215 aa26.06■■□□□ 1.76
CLN6-201ENST00000249806 ZKSCAN1P17029 563 aaPredicted RBP26.05■■□□□ 1.76
CLN6-201ENST00000249806 PDRG1Q9NUG6 133 aa26.05■■□□□ 1.76
CLN6-201ENST00000249806 LARGE1O95461 756 aa26.04■■□□□ 1.76
CLN6-201ENST00000249806 TIMM10P62072 90 aa26.04■■□□□ 1.76
CLN6-201ENST00000249806 TCIRG1Q13488 830 aa26.04■■□□□ 1.76
CLN6-201ENST00000249806 COL9A3Q14050 684 aaPredicted RBP26.04■■□□□ 1.76
CLN6-201ENST00000249806 LRRC24Q50LG9 513 aa26.04■■□□□ 1.76
CLN6-201ENST00000249806 NEUROD6Q96NK8 337 aa26.04■■□□□ 1.76
CLN6-201ENST00000249806 ISCA1Q9BUE6 129 aa26.04■■□□□ 1.76
CLN6-201ENST00000249806 TM6SF1Q9BZW5 370 aa26.04■■□□□ 1.76
CLN6-201ENST00000249806 MED23Q9ULK4 1368 aa26.04■■□□□ 1.76
CLN6-201ENST00000249806 SLC27A2O14975 620 aa26.04■■□□□ 1.76
CLN6-201ENST00000249806 CYP46A1Q9Y6A2 500 aa26.04■■□□□ 1.76
CLN6-201ENST00000249806 VPS53Q5VIR6 699 aa26.03■■□□□ 1.76
CLN6-201ENST00000249806 CAVIN1Q6NZI2 390 aaKnown RBP26.03■■□□□ 1.76
CLN6-201ENST00000249806 GPT2Q8TD30 523 aa26.03■■□□□ 1.76
CLN6-201ENST00000249806 HAUS7Q99871 368 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms