RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 ZBTB40Q9NUA8 1239 aa15.92■□□□□ 0.14
HCFC2-201ENST00000229330 DMTNQ08495 405 aa15.92■□□□□ 0.14
HCFC2-201ENST00000229330 CCDC57Q2TAC2 916 aa15.92■□□□□ 0.14
HCFC2-201ENST00000229330 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.92■□□□□ 0.14
HCFC2-201ENST00000229330 GBP2P32456 591 aaPredicted RBP15.92■□□□□ 0.14
HCFC2-201ENST00000229330 CCDC91Q7Z6B0 441 aa15.92■□□□□ 0.14
HCFC2-201ENST00000229330 KCNH5Q8NCM2 988 aa15.92■□□□□ 0.14
HCFC2-201ENST00000229330 CCDC43Q96MW1 224 aaKnown RBP15.92■□□□□ 0.14
HCFC2-201ENST00000229330 ECHDC1Q9NTX5 307 aa15.92■□□□□ 0.14
HCFC2-201ENST00000229330 BCCIPQ9P287 314 aaKnown RBP eCLIP15.92■□□□□ 0.14
HCFC2-201ENST00000229330 IFFO1Q0D2I5 559 aa15.92■□□□□ 0.14
HCFC2-201ENST00000229330 C16orf71Q8IYS4 520 aaPredicted RBP15.92■□□□□ 0.14
HCFC2-201ENST00000229330 MBIPQ9NS73 344 aa15.92■□□□□ 0.14
HCFC2-201ENST00000229330 EBAG9O00559 213 aa15.91■□□□□ 0.14
HCFC2-201ENST00000229330 NSD2O96028 1365 aa15.91■□□□□ 0.14
HCFC2-201ENST00000229330 KIF6Q6ZMV9 814 aa15.91■□□□□ 0.14
HCFC2-201ENST00000229330 CFAP43Q8NDM7 1665 aa15.91■□□□□ 0.14
HCFC2-201ENST00000229330 CCDC175P0C221 793 aa15.91■□□□□ 0.14
HCFC2-201ENST00000229330 TUBB4BP68371 445 aa15.91■□□□□ 0.14
HCFC2-201ENST00000229330 FKBP15Q5T1M5 1219 aa15.91■□□□□ 0.14
HCFC2-201ENST00000229330 TRAPPC8Q9Y2L5 1435 aa15.91■□□□□ 0.14
HCFC2-201ENST00000229330 WDR7Q9Y4E6 1490 aa15.91■□□□□ 0.14
HCFC2-201ENST00000229330 GNAT3A8MTJ3 354 aa15.91■□□□□ 0.14
HCFC2-201ENST00000229330 HSF2BPO75031 334 aa15.91■□□□□ 0.14
HCFC2-201ENST00000229330 NAA15Q9BXJ9 866 aaKnown RBP15.91■□□□□ 0.14
HCFC2-201ENST00000229330 HMG20BQ9P0W2 317 aa15.91■□□□□ 0.14
HCFC2-201ENST00000229330 BTBD11A6QL63 1104 aa15.9■□□□□ 0.14
HCFC2-201ENST00000229330 CKAP4Q07065 602 aaKnown RBP15.9■□□□□ 0.14
HCFC2-201ENST00000229330 NPHP3Q7Z494 1330 aa15.9■□□□□ 0.14
HCFC2-201ENST00000229330 UTP14CQ5TAP6 766 aaKnown RBP15.9■□□□□ 0.14
HCFC2-201ENST00000229330 TSC1Q92574 1164 aa15.9■□□□□ 0.14
HCFC2-201ENST00000229330 A2MP01023 1474 aa15.9■□□□□ 0.14
HCFC2-201ENST00000229330 CCDC102BQ68D86 513 aa15.9■□□□□ 0.14
HCFC2-201ENST00000229330 AEBP2Q6ZN18 517 aaPredicted RBP15.9■□□□□ 0.14
HCFC2-201ENST00000229330 HSPA4P34932 840 aa15.89■□□□□ 0.14
HCFC2-201ENST00000229330 PLEKHM2Q8IWE5 1019 aa15.89■□□□□ 0.14
HCFC2-201ENST00000229330 NEK1Q96PY6 1258 aa15.89■□□□□ 0.14
HCFC2-201ENST00000229330 CCDC113Q9H0I3 377 aa15.89■□□□□ 0.14
HCFC2-201ENST00000229330 EIF4G3O43432 1585 aaKnown RBP15.89■□□□□ 0.13
HCFC2-201ENST00000229330 MRPS27Q92552 414 aaKnown RBP15.89■□□□□ 0.13
HCFC2-201ENST00000229330 CCDC8Q9H0W5 538 aaPredicted RBP15.89■□□□□ 0.13
HCFC2-201ENST00000229330 GOLGA6L10A0A0M3HER8 536 aa15.89■□□□□ 0.13
HCFC2-201ENST00000229330 EHBP1Q8NDI1 1231 aa15.89■□□□□ 0.13
HCFC2-201ENST00000229330 MYL6BP14649 208 aa15.89■□□□□ 0.13
HCFC2-201ENST00000229330 ALS2CR12Q96Q35 445 aa15.89■□□□□ 0.13
HCFC2-201ENST00000229330 UBAC1Q9BSL1 405 aa15.89■□□□□ 0.13
HCFC2-201ENST00000229330 DCTPP1Q9H773 170 aa15.89■□□□□ 0.13
HCFC2-201ENST00000229330 RNF216Q9NWF9 866 aaPredicted RBP15.89■□□□□ 0.13
HCFC2-201ENST00000229330 POLR3DP05423 398 aaPredicted RBP15.88■□□□□ 0.13
HCFC2-201ENST00000229330 MAATS1Q7Z4T9 603 aa15.88■□□□□ 0.13
HCFC2-201ENST00000229330 GAS2L3Q86XJ1 694 aa15.88■□□□□ 0.13
HCFC2-201ENST00000229330 ZMYM4Q5VZL5 1548 aa15.88■□□□□ 0.13
HCFC2-201ENST00000229330 ELF2Q15723 593 aa15.88■□□□□ 0.13
HCFC2-201ENST00000229330 MRPL50Q8N5N7 158 aaKnown RBP15.88■□□□□ 0.13
HCFC2-201ENST00000229330 JADE2Q9NQC1 790 aa15.88■□□□□ 0.13
HCFC2-201ENST00000229330 CNNM1Q9NRU3 951 aa15.88■□□□□ 0.13
HCFC2-201ENST00000229330 PHF8Q9UPP1 1060 aa15.88■□□□□ 0.13
HCFC2-201ENST00000229330 HLTFQ14527 1009 aaKnown RBP eCLIP15.88■□□□□ 0.13
HCFC2-201ENST00000229330 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.88■□□□□ 0.13
HCFC2-201ENST00000229330 CEP126Q9P2H0 1117 aa15.88■□□□□ 0.13
HCFC2-201ENST00000229330 EVCP57679 992 aa15.87■□□□□ 0.13
HCFC2-201ENST00000229330 PIP4K2BP78356 416 aa15.87■□□□□ 0.13
HCFC2-201ENST00000229330 ZNF518AQ6AHZ1 1483 aa15.87■□□□□ 0.13
HCFC2-201ENST00000229330 GOLGA8BA8MQT2 603 aa15.87■□□□□ 0.13
HCFC2-201ENST00000229330 OPA1O60313 960 aa15.87■□□□□ 0.13
HCFC2-201ENST00000229330 HDXQ7Z353 690 aa15.87■□□□□ 0.13
HCFC2-201ENST00000229330 SPINK5Q9NQ38 1064 aaPredicted RBP15.87■□□□□ 0.13
HCFC2-201ENST00000229330 SYKP43405 635 aa15.87■□□□□ 0.13
HCFC2-201ENST00000229330 FLIIQ13045 1269 aa15.87■□□□□ 0.13
HCFC2-201ENST00000229330 MEIS3Q99687 375 aa15.87■□□□□ 0.13
HCFC2-201ENST00000229330 CTAGE9A4FU28 777 aa15.87■□□□□ 0.13
HCFC2-201ENST00000229330 SMC1AQ14683 1233 aaKnown RBP15.87■□□□□ 0.13
HCFC2-201ENST00000229330 CCDC178Q5BJE1 867 aa15.87■□□□□ 0.13
HCFC2-201ENST00000229330 SPECC1Q5M775 1068 aa15.87■□□□□ 0.13
HCFC2-201ENST00000229330 ANKRD62A6NC57 917 aa15.87■□□□□ 0.13
HCFC2-201ENST00000229330 PHACTR2O75167 634 aa15.87■□□□□ 0.13
HCFC2-201ENST00000229330 AK2P54819 239 aa15.87■□□□□ 0.13
HCFC2-201ENST00000229330 ANKRD18AQ8IVF6 992 aa15.87■□□□□ 0.13
HCFC2-201ENST00000229330 OTUD6BQ8N6M0 293 aa15.87■□□□□ 0.13
HCFC2-201ENST00000229330 TMEM63CQ9P1W3 806 aa15.87■□□□□ 0.13
HCFC2-201ENST00000229330 TAF7Q15545 349 aaPredicted RBP15.86■□□□□ 0.13
HCFC2-201ENST00000229330 KCNG4Q8TDN1 519 aa15.86■□□□□ 0.13
HCFC2-201ENST00000229330 PHAXQ9H814 394 aaKnown RBP15.86■□□□□ 0.13
HCFC2-201ENST00000229330 POLR3AO14802 1390 aaPredicted RBP15.86■□□□□ 0.13
HCFC2-201ENST00000229330 DNA2P51530 1060 aa15.86■□□□□ 0.13
HCFC2-201ENST00000229330 CACNA2D4Q7Z3S7 1137 aa15.86■□□□□ 0.13
HCFC2-201ENST00000229330 TUBBP07437 444 aa15.86■□□□□ 0.13
HCFC2-201ENST00000229330 EZRP15311 586 aaKnown RBP15.86■□□□□ 0.13
HCFC2-201ENST00000229330 PIK3C2GO75747 1445 aa15.86■□□□□ 0.13
HCFC2-201ENST00000229330 SPECC1LQ69YQ0 1117 aa15.86■□□□□ 0.13
HCFC2-201ENST00000229330 KANK3Q6NY19 840 aa15.86■□□□□ 0.13
HCFC2-201ENST00000229330 ZHX3Q9H4I2 956 aa15.86■□□□□ 0.13
HCFC2-201ENST00000229330 PRAG1Q86YV5 1406 aa15.86■□□□□ 0.13
HCFC2-201ENST00000229330 MATR3P43243 847 aaKnown RBP eCLIP15.85■□□□□ 0.13
HCFC2-201ENST00000229330 GIGYF2Q6Y7W6 1299 aaKnown RBP15.85■□□□□ 0.13
HCFC2-201ENST00000229330 IFNKQ9P0W0 207 aa15.85■□□□□ 0.13
HCFC2-201ENST00000229330 LMOD1P29536 600 aaPredicted RBP15.85■□□□□ 0.13
HCFC2-201ENST00000229330 ORC3Q9UBD5 711 aaPredicted RBP15.85■□□□□ 0.13
HCFC2-201ENST00000229330 FOXO3O43524 673 aa15.85■□□□□ 0.13
HCFC2-201ENST00000229330 TDO2P48775 406 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms